GitLab

Initial sketch for changes to shape to handle dynamic dimensions

Instead of just unsqueezing to an axis of 1 a step can be set to use instead. So instead of unsqueezing {3, 12} to {3, 1, 12} a step of 2 will unsqeeze to {3, 2, 6} instead

Updated each source file in the repo with the existing license.

Changed the pooling values for two structures from strings to specialized enum classes. Many test and operator parsing changes to support this. Introduces one new source file, op_enums.cpp.

Add onnx parser and ref and gpu implementations of ONNX op ScatterND

Support nonstandard shapes like slice, broadcast and transpose for the unsqueeze op

Support slice, broadcast and transpose shapes for the squeeze op.

Implementation of the roialign operator. For now, we have only the ref implementation. When we run a model on the GPU, we fall back the execution to use the ref implementation.

Previously dot operator was defined as C = alpha * A . B + beta * C where * is scalar multiplication and . is dot product or matrix multiplication depending on dimension of the inputs.

Aim is to have the definition of dot operator as C = A . B without having alpha or beta.

In order to achieve the same effect as alpha and beta (1) it multiplies the one of the inputs to the dot operator with alpha value. (2) if beta is present then, multiplies the C with beta and then adds into the output from step 1.

Add multinomial op to onnx parser with ref and GPU implementations.

The onnx parser inserts a literal of shape {batch_size, sample_size} with random values in the range [0, 1) and inserts existing ops to compute the cumulative density function. The multinomial operator multiplies the random values by the sum of the CDF and returns the index of the first element of the CDF that is greater than the result, representing samples randomly drawn from [0, class_size) that follow the log-probability distribution.

Resolves #821
Co-authored-by: Shucai Xiao <shucai@gmail.com>

Implement the Where operator for the CPU and GPU.  This is for better performance.

* fix two asserts for debug build

* add unit test for copy parameters

* clang format

* add a unit test for reorder_dims

* change tranpose to always require perm not be empty

* clang format

* remove an unnecessary line

* fix tidy error

* fix review comments

* rename broadcast and multibroadcast output_lens attribute to out_lens attribute, and change tests and source code to reflect the same

* change the reshape attribute from dims to out_lens

* change transpose attribute's name from dims to perm to reflect better meaning

* use permutation instead of perm for transpose

clang formaating

* use dims instead of out_lens for reshape

clang formatting

* unary scalar input processing

* remove an unnecessary change

* remove unnecessary blank line

* Add definitions for all pointwise operators

* Formatting

* Add cpp generator class

* Formatting

* Move compilation to core

* Formatting

* Add clock to tmp name

* Add dynamic loader

* Formatting

* Add tests for code gen

* Formatting

* Add test for literals

* Formatting

* Use with_char

* Add missing header

* Fix mismerge

* Ignore tidy warning

* Fxx gcc 5 errors

* Apply fixits

* Skip signed bitwise of status

* Remove unused parameters

* Explicitly add c++14 flag

* Fix tidy warning

* unify the compute function signature

* clang format

* make another change

* unify the compute function

* clang format

* remove unnecessary code

* more refinement about the operator compute funciton

* clang format

* add an overload function

* clang format

* add support for axes inputs for sequeeze/unsqueeze/reduce_sum

* clang format

* fix build problems

* backup code changes

* clang format

* Add tuple type to shape class

* Formatting

* fix a bug in parsing quantizelinear operator

* clang format

* fix a cppcheck error

* disable different versions of unit tests for different onnx version

* clang format

* upgrade onnx to 1.8

* update onnx to 1.8.1

* disable two more real models

* clang format

* Make data member private

* Formatting

* Add sub arguments

* Formatting

* Trun clang format off

* Disable clang-format

* fix review comments

* fix the function of assign axes in parsing the squeeze operator

* add unit tests and fix a bug

* clang format

* fix review comments

* clang format

* fix a build error

* backup code changes

* clang format

* add more unit tests and add parsing opset version

* clang format

* Improve visiting tuples

* Formatting

* fix cppcheck error

* adding installing the onnx package

* resolve no protobuf compiler

* add an inline subgraph pass

* clang format

* Add more argument tests

* Formatting

* Handle tuple in load

* Formatting

* code backup

* clang format

* Remove .o files

* Add tuple type to api

* Formatting

* fix build errors

* clang format

* code backup

* code backup

* add unit tests for the inline subgraph

* clang format

* refine the inline subgraph and parse if operator

* clang format

* fix cppcheck issue

* clang format

* add unit test for inline subgraph pass

* clang format

* fix format issue

* remove the context from the if operator

* clang format

* simplify the compute functions

* Fix tidy warnings

* fix cppcheck error

* clang format

* fix cppcheck error

* Fix tidy warnings

* fix a cppcheck error

* clang format

* Add a test for share method

* Formatting

* Add a test cpp_type

* add unit tests for more code coverage

* clang format

* add unit tests to have more code coverage

* clang format

* try a comment in jenkins build

* include the install onnnx line

* code backup

* reorder the dependenciesd installed

* refine dockerfile

* fix review comments

* clang format

* remove unnecessary overload function

* fix cppcheck error

* change back the argument test

* Suppress tidy warning

* add the operator get_tuple_elem

* clang format

* add get_tuple_elem to operator include file

* chang if to support multiple operation outputs

* clang format

* optimize inline subgraph

* clang format

* code backup

* clang format

* fix bug

* refine unit tests for tuple output of the if operator

* clang format

* refine a instruction replacement code

* add a unit test and sort all the unit tests alphabetically

* fix cppcheck error

* add more unit tests for multiple op outputs

* clang format

* fix cppcheck error

* Update pass manager to get modules after every pass

* more unit test to cover more scenarios

* clang format

* fixed a bug in a unit test

* add more tests

* clang format

* add more unit tests to have more code coverage

* fix a bug in a unit test

* Add program overload for module

* Formatting

* Hash modules for quicker lookup of modules

* Bump file version

* Add methods to remove modules

* Formatting

* add the tuple type to the support list

* Eliminate unused modules

* Formatting

* Fix test errors

* Foramtting

* Fix tidy issues

* fix problem related to inline subgraph

* clang format

* fix review comments

* fix review comments

* fix review comments

* fix review comments

* clang format

* fix a unit test

* one more code change

* remove an optimization related to the if operator

* clang format

* fix review comments
Co-authored-by: Paul <pfultz2@yahoo.com>
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* add the operator step

* clang formatJ

* add unit tests

* clang format

* add more unit test for step op

* clang format

* add more unit tests

* clang format

* fix review comments

* clang format

* rename two unit tests
Co-authored-by: Paul Fultz II <pfultz2@yahoo.com>

* Add scan struct; add initial tests; initial algorithm by cases; refactor into one algorithm; clean up code

* Rename; restructure; begin adding additional attributes

* refactor to use shape_for_each; temporarily drop reverse mode

* Add back reverse mode with shape_for_each_reverse; update tests; add axis bounds check

* Begin adding to onnx parser

* Add to onnx parser

* Fix onnx test

* Fix CI warnings

* Update algorithm to use slice+par_for; update gen_onnx; remove .o files; remove redundant axis normalizing

* Add exclusive mode

* Add reverse mode

* Remove .pyc file

* Fix warning

* Remove shape_for_each_reverse; clean up pointer usage for exclusive cases

* Remove unused variable

* Fix onnx test

* Add test case to op_shape_test

* Formatting

* Formatting

* Fix tidy warning

* Formatting

* Formatting

* Formatting

* Increase code coverage

* Formatting

* refine the script for creating the cumsum onnx file

* Alphabetize includes for operators.hpp

* Revise onnx test

* Remove redundant bounds check

* Formatting and style

* Alphabetize tests

* Remove duplicate tests from merge

* Fix tidy warning for sub_test
Co-authored-by: Shucai Xiao <Shucai.Xiao@amd.com>
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Add eliminate_data_type pass

* Formatting

* Auto convert quant ops

* Formatting

* Flip the order of decompose

* Compute max size differently

* Formatting

* Clamp values in convert

* Formatting

* Fix loss of precision in reduce

* Formatting

* Fix bugs in reduction

* Fix accumulator type in reference softmax implementation

* Formatting

* Update convert test

* Remove unused variables

* Remove unnecessary quant_dot check

* Formatting

* Add tests

* Formatting

* Remove unused code

* Remove duplicate ops

* Remove blaze dependency

* Use set since shape::type_t is no hashable on gcc 5

* Formatting
Co-authored-by: Shucai Xiao <shucai@gmail.com>
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Normalize compute functions

* Formatting

* Save normalization flag to the file

* Formatting

* Remove tuned functions

* Formatting

* Use in_index
Co-authored-by: Shucai Xiao <shucai@gmail.com>
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* change transpose func

* formatting

* fix tf file

* add tests, change broadcast

* formatting

* revert if statement

* add nonzero axis test

* formatting

* remove test and add test file

* fix test

* formatting

* add test for more coverage

* change error message

* change error message
Co-authored-by: Paul Fultz II <pfultz2@yahoo.com>

* Load op when serializing

* Formatting

* Add missing clip field

* Use make_op almost everywhere

* Formatting

* More make ops for rnns

* Get rid of spaces

* Formatting

* Remove operators headers

* Formatting

* Remove unused op headers

* Increase line threshold

* change transpose func

* formatting

* fix tf file

* add tests, change broadcast

* formatting

* revert if statement

* add nonzero axis test

* formatting

* remove test and add test file
Co-authored-by: Paul Fultz II <pfultz2@yahoo.com>

* code backup

* clang format

* change corresponding tool files

* clang format
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Enforce op name for check_shapes class

* Add test for scalar

* Formatting
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* support pooling ceil_mode

* clang format

* add unit test for pooling ceil mode

* clang format

* fix review comments

* clang format

* add more unit tests and fixed a bug in cpu pooling implementation

* clang format

* add one more unit test

* clang format

* fix cppcheck error

* fix cppcheck error

* fix cppcheck error

* fix review comments

* clang format

* remove the padding_mode attribute in pooling

* clang format

* clang format

* fix review comments

* clang format

* fix a cppcheck error

* fix review comments
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* initial progress

* formatting

* check existing tests

* formatting

* change for loop to transform

* formatting

* add tests

* formatting

* remove comment

* add more tests

* update gpu miopen calls

* formatting

* initial progress

* add cpu impl and tests

* formatting

* add NOLINT

* add 3d test

* formatting

* add more op_shape tests

* fix error msg

* fix bounds

* formatting

* fix algorithm

* formatting

* pin numpy version
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Initial cpu conv-nd

* Formatting

* Make index signed

* Formatting

* Assert the indices are greater than 0

* Use equal instead of lexicographical_compare

* Formatting

* change the batchnorm cpu implementation to support multiple input dimensions

* clang format

* add unit tests for cpu batch_norm nd implementation

* clang format

* support nd batchnormalization

* clang format

* add rewrite batch_norm unit tests

* clang format

* remove a unit test

* Fix tidy errors

* Formatting

* Handle different types

* Formatting

* Fix nested visits

* Formatting

* Add 3d conv test

* Formatting

* revert unnecessary changes

* remove a print line

* Fix ICE

* Formatting

* fix the per_activation mode of 2d

* clang format

* code clean up

* clang format

* add 1d and 3d gpu unit test

* clang format

* add unit test for rewrite_batchnorm

* clang format

* additional refinement

* fix review comments

* added a unit test to have more code coverage
Co-authored-by: Paul <pfultz2@yahoo.com>
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* initial progress

* formatting

* add pooling changes

* formatting

* change eliminate_pad

* formatting

* rename var

* fomratting

* update op shape test and compute

* formatting

* revert conv constructor

* formatting

* change initializer

* formatting

* fix tidy

* change quant conv and shape check

* add tests and fixes

* formatting

* fix type

* fix conv test

* formatting

* add pooling and bn tests

* formatting

* add inconsistent attr tests

* fix padding issue

* formatting

* progress on 1d to 2d

* formatting

* change compute and compile functions

* formatting

* fix duplicate

* fix conflict

* fix issue with 1d conv

* formatting

* add check for 3d limit

* rename function

* formatting

* update to MIOPen 2.3

* add support for nd pooling

* formatting

* test miopen 2.4

* change function name

* rename functions

* formatting

* add op_shape test

* add gpu ops tests

* formatting

* add pkg-config

* change functions

* formatting

* change to copy_backward

* formatting

* test diff miopen version

* add pooling shape tests

* temp disable test

* revert to miopen 2.4
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* initial progress

* formatting

* check existing tests

* formatting

* change for loop to transform

* formatting

* add tests

* formatting

* remove comment

* add more tests

* remove extra slice axes
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* initial progress

* formatting

* add pooling changes

* formatting

* change eliminate_pad

* formatting

* rename var

* fomratting

* update op shape test and compute

* formatting

* revert conv constructor

* formatting

* change initializer

* formatting

* fix tidy

* change quant conv and shape check

* add tests and fixes

* formatting

* fix type

* fix conv test

* formatting

* add pooling and bn tests

* formatting

* add inconsistent attr tests

* fix padding issue

* formatting

* progress on 1d to 2d

* formatting

* change compute and compile functions

* formatting

* fix duplicate

* fix conflict

* fix issue with 1d conv

* formatting

* add check for 3d limit

* rename function

* formatting

* rename functions

* formatting

* add op_shape test

* change functions

* formatting

* change to copy_backward

* formatting

* initial progress

* formatting

* add pooling changes

* formatting

* change eliminate_pad

* formatting

* rename var

* fomratting

* update op shape test and compute

* formatting

* revert conv constructor

* formatting

* change initializer

* formatting

* fix tidy

* change quant conv and shape check

* add tests and fixes

* formatting

* fix type

* fix conv test

* formatting

* add pooling and bn tests

* formatting

* add inconsistent attr tests

* fix padding issue

* formatting

* fix review comments, remove duplicate test

* formatting

* fix variable

* fix assert bug

* fix attr check

* remove std
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Fix bug in unsqueeze shape and improve test coverage

* Remove else statement

* Revert unsqueeze changes

* Update tests

* Formatting

* Update tests

* Fix handling of scalars

* Add another scalar test
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Make contiguous preserve scalar shape

* Formatting

* Improve standard shape calulation

* Formatting

* Enable some optimizations on debug build

* Up optimization level

* Remove debug symbols
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>

* Add initial api

* Formatting

* Add more api

* Formatting

* Add auto api generation

* Formatting

* Fix some compilation errors

* Change handle struct

* Formatting

* Fix reamining compilation errors

* Formatting

* Simplify using ctype

* Formatting

* Initial c++ generation

* Formatting

* Add C++header

* Formatting

* Add test

* Formatting

* Add initial tests

* Formatting

* Try to fix formatting

* Cleanup formatting

* Formatting

* Fix constructors on the same line

* Fix tests

* Formatting

* Fix tidy issues

* Fix tidy issues

* Fix naming issue

* Add onnx API to parse buffer

* Formatting

* Add arguments api

* Formatting

* Fix verify parameters

* Fix cppcheck issues

* Formatting

* Add method to get output shapes and bytes

* Formatting

* Try formatting

* Formatting

* Improve the test coverage

* Formatting

* Add print method

* Formatting

* Fix cppcheck issue

* Fix package dependency

* change migraphx api to support multiple program outputs

* clang format

* change api implementation

* clang format

* fix a build error

* change api for correct automatic generation

* clang format

* Add nolint

* Try fix formatting

* Formatting

* formatting

* formatting

* Fix formatting

* code cleanup

* clang format

* fix cppcheck error

* fix review comments

* clang format
Co-authored-by: Paul Fultz II <pfultz2@yahoo.com>
Co-authored-by: kahmed10 <15948690+kahmed10@users.noreply.github.com>

* improve unsqueeze to support negative axis and parsing scalar

* clang format

* add a test example for the negative axis of unsqueeze

* improve the squeeze operator to support negative axis

* clang format

* fixed a small bug in the lrn implementation

* clang format

* support negative axis in argmax and argmin

* clang format

* improve flatten to support negative axis

* clang format

* change softmax/logsoftmax to support negative axis

* clang format

* improve transpose by adding default perm

* clang format

* add one more dimens for tensor size

* add one more dimens for tensor size

* disable conv ops fusion for non-symmetric cases

* clang format

* fixed review comments

* move computing axis from the device function to the compute function

* clang format

* move computing axis from device function to the operator computing function

* clang format
Co-authored-by: mvermeulen <5479696+mvermeulen@users.noreply.github.com>