Commit 420fb08f authored by Ali Cowen-Rivers's avatar Ali Cowen-Rivers Committed by Copybara-Service
Browse files

Adding recycle information for timings.

PiperOrigin-RevId: 497360470
Change-Id: I3a9f3ba608ac3ceeaaccfe281a82d43fae1d265e
parent a9e5451f
......@@ -353,12 +353,12 @@ can be done via the `--num_multimer_predictions_per_model` flag, e.g. set it to
### AlphaFold prediction speed
The table below reports prediction runtimes for proteins of various lengths. We
only measure unrelaxed structure prediction while excluding runtimes from MSA
and template search. When running `docker/run_docker.py` with
`--benchmark=true`, this runtime is stored in `timings.json`. All runtimes are
from a single A100 NVIDIA GPU. Prediction speed on A100 for smaller structures
can be improved by increasing `global_config.subbatch_size` in
`alphafold/model/config.py`.
only measure unrelaxed structure prediction with three recycles while
excluding runtimes from MSA and template search. When running
`docker/run_docker.py` with `--benchmark=true`, this runtime is stored in
`timings.json`. All runtimes are from a single A100 NVIDIA GPU. Prediction
speed on A100 for smaller structures can be improved by increasing
`global_config.subbatch_size` in `alphafold/model/config.py`.
No. residues | Prediction time (s)
-----------: | ------------------:
......
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