GitLab

* chore: add expected output to the sample code.

* add: imagenet-1k labels to the model config.

* chore: apply code formatting.

* chore: change the expected output.

* Rebase ESM PR and update all file formats

* Fix test relative imports

* Add __init__.py to the test dir

* Disable gradient checkpointing

* Remove references to TFESM... FOR NOW >:|

* Remove completed TODOs from tests

* Convert docstrings to mdx, fix-copies from BERT

* fix-copies for the README and index

* Update ESM's __init__.py to the modern format

* Add to _toctree.yml

* Ensure we correctly copy the pad_token_id from the original ESM model

* Ensure we correctly copy the pad_token_id from the original ESM model

* Tiny grammar nitpicks

* Make the layer norm after embeddings an optional flag

* Make the layer norm after embeddings an optional flag

* Update the conversion script to handle other model classes

* Remove token_type_ids entirely, fix attention_masking and add checks to convert_esm.py

* Break the copied from link from BertModel.forward to remove token_type_ids

* Remove debug array saves

* Begin ESM-2 porting

* Add a hacky workaround for the precision issue in original repo

* Code cleanup

* Remove unused checkpoint conversion code

* Remove unused checkpoint conversion code

* Fix copyright notices

* Get rid of all references to the TF weights conversion

* Remove token_type_ids from the tests

* Fix test code

* Update src/transformers/__init__.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update src/transformers/__init__.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update README.md
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Add credit

* Remove _ args and __ kwargs in rotary embedding

* Assertively remove asserts

* Replace einsum with torch.outer()

* Fix docstring formatting

* Remove assertions in tokenization

* Add paper citation to ESMModel docstring

* Move vocab list to single line

* Remove ESMLayer from init

* Add Facebook copyrights

* Clean up RotaryEmbedding docstring

* Fix docstring formatting

* Fix docstring for config object

* Add explanation for new config methods

* make fix-copies

* Rename all the ESM- classes to Esm-

* Update conversion script to allow pushing to hub

* Update tests to point at my repo for now

* Set config properly for tests

* Remove the gross hack that forced loss of precision in inv_freq and instead copy the data from the model being converted

* make fixup

* Update expected values for slow tests

* make fixup

* Remove EsmForCausalLM for now

* Remove EsmForCausalLM for now

* Fix padding idx test

* Updated README and docs with ESM-1b and ESM-2 separately (#19221)

* Updated README and docs with ESM-1b and ESM-2 separately

* Update READMEs, longer entry with 3 citations

* make fix-copies
Co-authored-by: Your Name <you@example.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
Co-authored-by: Tom Sercu <tsercu@fb.com>
Co-authored-by: Your Name <you@example.com>

* Catch HfValidationError in TrainingSummary
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* First draft

* Make basic test work

* Fix most tokenizer tests

* More improvements

* Make more tests pass

* Fix more tests

* Fix some code quality

* Improve truncation

* Implement feature extractor

* Improve feature extractor and add tests

* Improve feature extractor tests

* Fix pair_input test partly

* Add fast tokenizer

* Improve implementation

* Fix rebase

* Fix rebase

* Fix most of the tokenizer tests.

* propose solution for fast

* add: integration test for fasttokenizer, warning for decode, fix template in slow tokenizer

* add: modify markuplmconverter

* add: some modify on converter and tokenizerfast

* Fix style, copies

* Make fixup

* Update tokenization_markuplm.py

* Update test_tokenization_markuplm.py

* Update markuplm related

* Improve processor, add integration test

* Add processor test file

* Improve processor

* Improve processor tests

* Fix more processor tests

* Fix processor tests

* Update docstrings

* Add Copied from statements

* Add more Copied from statements

* Add code examples

* Improve code examples

* Add model to doc tests

* Adding dependency check

* Add dummy file

* Add requires_backends

* Add model to toctree

* Fix more things, disable dependency check for now

* Apply more suggestions

* Add soft dependency

* Add annotators to tests

* Fix style

* Remove from_slow=True

* Remove print statements

* Add sanity check

* Fix processor test

* Fix processor tests, add more docs

* Add doc tests for mdx file

* Add more tips

* Apply suggestions
Co-authored-by: Niels Rogge <nielsrogge@Nielss-MacBook-Pro.local>
Co-authored-by: lockon-n <45759388+lockon-n@users.noreply.github.com>
Co-authored-by: SaulLu <lucilesaul.com@gmail.com>
Co-authored-by: lockon-n <dd098309@126.com>

* pass sampled_negative_indices parameter to the model to avoid getting a None loss
* concerns doc examples for Wav2Vec2ForPreTraining and Wav2Vec2ConformerForPreTraining

* Just stick a couple of casts into generate()

* Cast decoder_input_ids too

* Don't accidentally cast floats

* Move to _generate()

* Move to after input validation
Co-authored-by: Your Name <you@example.com>

* Ensures consistent arguments and outputs with other post-processing methods
* Adds post_process_semantic_segmentation, post_process_instance_segmentation, post_process_panoptic_segmentation, post_process_object_detection methods to DetrFeatureExtractor
* Adds deprecation warnings to post_process, post_process_segmentation and post_process_panoptic

* Use  instead of  from huggingface_hub

* bump huggingface_hub to 0.10.0 + make deps_table_update

* fix opt softmax nit

- Use the same logic as 1eb09537550734a783c194e416029cb9bc4cb119 for consistency

* Update src/transformers/models/opt/modeling_opt.py

* chore: initial commit

* chore: adding util methods

yet to work on the nn.functional.interpolate port with align_corener=True

* chore: refactor the utils

* used tf.compat.v1.image.resize to align the F.interpolate function
* added type hints to the method signatures
* added references to the gists where one 2 one alignment of torch and tf has been shown

* chore: adding the layers

* chore: porting all the layers from torch to tf

This is the initial draft, nothing is tested yet.

* chore: aligning the layers with reference to tf clip

* chore: aligning the modules

* added demaraction comments
* added copied and adapted from comments

* chore: aligning with CLIP

* chore: wrangling the layers to keep it tf compatible

* chore: aligning the names of the layers for porting

* chore: style changes

* chore: adding docs and inits

* chore: adding tfp dependencis

the code is taken from TAPAS

* chore: initial commit for testing

* chore: aligning the vision embeddings with the vit implementatino

* chore: changing model prefix

* chore: fixing the name of the model and the layer normalization test case

* chore: every test passes but the slow ones

* chore: fix style and integration test

* chore: moving comments below decorators

* chore: make fixup and fix-copies changes

* chore: adding the Vision and Text Model to check_repo

* chore: modifying the prefix name to align it with the torch implementation

* chore: fix typo in configuration

* choer: changing the name of the model variable

* chore: adding segmentation flag

* chore: gante's review

* chore: style refactor

* chore: amy review

* chore: adding shape_list to parts that have been copied from other snippets

* chore: init batchnorm with torch defaults

* chore: adding shape_list to pass the tests

* test fix: adding seed as 0

* set seed

* chore: changing the straight through trick to fix -ve dimensinos

* chore: adding a dimension to the loss

* chore: adding reviewers and contributors names to the docs

* chore: added changes after review

* chore: code quality fixup

* chore: fixing the segmentation snippet

* chore: adding  to the layer calls

* chore: changing int32 to int64 for inputs of serving

* chore: review changes

* chore: style changes

* chore: remove from_pt=True

* fix: repo consistency
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* fix fp16 for xglm

* Removed misleading comment

* Fix undefined variable
Co-authored-by: Gabriele Sarti <gsarti@amazon.com>
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>
Co-authored-by: Younes Belkada <49240599+younesbelkada@users.noreply.github.com>

* Document and validate typical_p in generation

* Fix doctest for TFDeiTForImageClassification

* Remove unnecessary tf.random.set_seed
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Improve deprecation warning for return_all_scores

* Fix formatting

* add warning when left padding should be used

* PT: check for pad token; FLAX: can only check while not tracing

* Added tests for yaml and json

* Added tests for yaml and json

* Use math.pi
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Add a gpt_j_residual argument to control the residual computing way

* Put duplicate code outside of the if block

* Rename parameter "gpt_j_residual" to "use_parallel_residual" and set the default value to True

* remove unused cur_len in generation_utils.py

* linting

* Fix cached_file in offline mode for cached non-existing files

* Add tests

* Test with offline mode

Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Changed json_file_parser function and added yaml parser function

* update hf_argparser

* Added allow_extra_keys argument

* Use repo_type instead of deprecated datasets repo IDs

* Add missing one in doc

Co-authored-by: Ankur Goyal <ankur@impira.com>

* Remove pos arg from Perceiver's Pre/Postprocessors

* Revert the removed pos args in public methods

* fix incorrect comments about atten mask

* typo

* Update for CodeGen
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Fix bug in example and add to tests

* Fix failing tests

* Check the size of logits

* Code style

* Try again...

* Add expected loss for PerceiverForMaskedLM doctest
Co-authored-by: Steven Anton <antonstv@amazon.com>
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* fix in-place preprocessing of inputs

* add post-processing method for semantic segmentation
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* support for multiple eval datasets

* support multiple datasets in seq2seq trainer

* add documentation

* update documentation

* make fixup

* revert option for multiple compute_metrics

* revert option for multiple compute_metrics

* revert added empty line

Signed-off-by: Wang, Yi A <yi.a.wang@intel.com>
Signed-off-by: Wang, Yi A <yi.a.wang@intel.com>

* Fix TrainingArguments documentation

* Fix TFTrainingArguments documentation

Co-authored-by: Niels Rogge <nielsrogge@Nielss-MacBook-Pro.local>

* feat: modeling and conversion scripts for msn.

* chore: change license year.

* chore: remove unneeded modules.

* feat: direct loading of state_dict from remote url.

* fix: import paths.

* add: rest of the files.

* add and fix rest of the files.
Co-authored-by: Niels <niels.rogge1@gmail.com>

* chore: formatting.

* code quality fix.

* chore: remove pooler.

* feat: add classification top.

* fix: configuration object.

* add: initial test cases (one failing).

* fix: basemodeloutput.

* add: caution on using the classification head.

* add: rest of the model related files.

* add: vit msn readme.

* fix: copied from statement.

* fix: dummy objects.

* add: ViTMSNPreTrainedModel to inits.

* fix: repo consistency.

* minor change in the model doc.

* fix: tests.

* Empty-Commit

* Update src/transformers/models/vit_msn/configuration_vit_msn.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* address PR comments.

* Update src/transformers/models/vit_msn/modeling_vit_msn.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* chore: put model in no_grad() and formatting.
Co-authored-by: Niels <niels.rogge1@gmail.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>