GitLab

* added BioGptForSequenceClassification

* added source of copied code

* typo

* Format code with black

* Update comments for copied code

* Remove code copy comment

* Apply suggestions from code review
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
Co-authored-by: Arthur <48595927+ArthurZucker@users.noreply.github.com>

* Fix failing tests

* Update code copied from comments

* Fix code quality

* Update src/transformers/models/biogpt/modeling_biogpt.py
Co-authored-by: Arthur <48595927+ArthurZucker@users.noreply.github.com>

* Apply suggestions from code review
Co-authored-by: Arthur <48595927+ArthurZucker@users.noreply.github.com>

* Fix lint error

* Update src/transformers/models/biogpt/modeling_biogpt.py
Co-authored-by: Arthur <48595927+ArthurZucker@users.noreply.github.com>

* Rename model to biogpt for consistency

* Add PipelineTesterMixin to test_modeling_biogpt.py

* Apply suggestions from code review
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* Resolve merge confict

---------
Co-authored-by: Guillem García Subies <37592763+GuillemGSubies@users.noreply.github.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
Co-authored-by: Arthur <48595927+ArthurZucker@users.noreply.github.com>
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* update Open-Llama model

* update

* update format

* update doc

* update

* update stable embedding test

* update test case

* update format

* update readme

* fix typo

* update name

* remove tokenizer and update format

* remove convert_open_llama_weights_to_hf

* update warning and doc_string

---------
Co-authored-by: songliang.bayesian <songliang.bayesian@bytedance.com>

skip
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* switch np.random.permutation to jax.random.permuation

* remove comments

* remove leftover comment

* skip similarity tests

* modify indices_prng_key usage, add deterministic behaviour

* update style

* remove unused import

* remove copy statement since classes are not identical

* remove numpy import

* revert removing copied from statements

* make style from copied

* remove copied from statement

* update copied from statement to include only np.ndarry

* add deterministic args, unittestskip equivalence tests

* update

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* added GPTNeoForTokenClassification

* add to top-level init

* fixup

* test

* more fixup

* add to gpt_neo.mdx

* repo consistency

* dummy copy

* fix copies

* optax >= 0.1.5 assumes jax.Array exists - which it doesn't for jax <= 0.3.6

* merge with main made this superfluous

* added classifier_dropout

* remove legacy code

* removed fmt:on/off
removed expected_outputs

* doc style fix

* classifier_dropout is always in config

---------
Co-authored-by: Prof. Peter Schneider-Kamp <jps@ordbogen.com>

* initial commit

* added GPTNeoXForTokenClassification

* typo

* doc
fixed extra comma that turned into a tuple

* unifying variable names
fixing forward call

* classifier_dropout is in config
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

---------
Co-authored-by: Prof. Peter Schneider-Kamp <jps@ordbogen.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* multiple fixes

- add `add_special_tokens` to `True` by default
- remove label smoothing and labels masking

* fix test

* Add initial changes for TF wav2vec2 for sequence classification

* Add suggested changes

* Add serving and serving output methods

* Add serving_output implementation and fix layer_weights

* Add fixes

* Fixed test cases

* Fixing test and adding suggested changes

* fix

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* run_check_tiny_models

* update summary

* update mixin

* update pipeline_model_mapping

* update pipeline_model_mapping

* Update for gpt_bigcode

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

Adds FocalNet by Microsoft to transformers

---------
Co-authored-by: Niels Rogge <nielsrogge@Nielss-MacBook-Pro.local>
Co-authored-by: alaradirik <alaradirik@gmail.com>

* patch

* add test

* move tests

* cover more cases (will fail nw update the code)

* style

* fix

* Update src/transformers/models/sam/image_processing_sam.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* Update src/transformers/models/sam/image_processing_sam.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* add better check

---------
Co-authored-by: Younes Belkada <49240599+younesbelkada@users.noreply.github.com>
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
Co-authored-by: younesbelkada <younesbelkada@gmail.com>

* add test update and docs edits

* docs edit suggestion

* patch test with values

* lower tol

* fix

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* integration tests were not being run

* add tests for short input waveform

* rewrite test for long input

* even more betterer

* my bad

* oh boy

fix
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* cleanup

* updates

* more refactoring

* make style

* update inits

* support other inputs in base

* update based on review
Co-authored-by: Nicolas Patry <patry.nicolas@gmail.com>

* Update tests/pipelines/test_pipelines_automatic_mask_generation.py
Co-authored-by: Nicolas Patry <patry.nicolas@protonmail.com>

* update

* fixup

* TODO x and y to refactor, _h _w refactored here

* update docstring

* more nits

* style on these

* more doc fix

* rename variables

* update

* updates

* style

* update

* fix `_mask_to_rle_pytorch`

* styling

* fix ask to rle, wrong outputs

* add device arg

* update

* more updates, fix tets

* udpate

* update docstrings

* styling

* fixup

* add notebook on the docs

* update orginal sizes

* fix docstring

* updat condition on point_per-batch

* updates tests

* fix CI  test

* extend is required, append does not work!

* fixup

* fix CI tests

* whit pixels left

* address doc comments

* fix doc

* slow pipeline tests

* update auto init

* add revision

* make fixup

* update p!ipoeline tag when calling tests

* alphabeitcal order in inits

* fix copies

* last style nits

* Apply suggestions from code review
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* reformat docstring

* more reformat

* address most of the comments

* Update src/transformers/pipelines/mask_generation.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* final refactor

* Update src/transformers/models/sam/image_processing_sam.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* fixup and fix slow tests

* revert

---------
Co-authored-by: Nicolas Patry <patry.nicolas@gmail.com>
Co-authored-by: Nicolas Patry <patry.nicolas@protonmail.com>
Co-authored-by: younesbelkada <younesbelkada@gmail.com>
Co-authored-by: Younes Belkada <49240599+younesbelkada@users.noreply.github.com>
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

Fix weight tying in ESM

* initial commit

* keys match

* update, fix conversion

* fixes, inference working

* fix

* more fixes

* more fixes

* clean up

* more clean up

* fix copies and add convext copied layer norm

* stash

* pretty big upfate

* cleaning

* more cleaning

* fixup stuffs

* fix copies

* fix iinit

* update test removing tokenizer

* nits

* add pretrained

* more nits

* remove tracking of pipeline

* few fixes

* update san and conversion script

* fix mask decoder and prompt encoder conversion

* fixes

* small update

* fix order

* fix

* fix image embeddings

* nites

* few fixes

* fix logits

* clean up

* fixes boxes inference

* v1 AMG

* clean up

* some clean up

* multi points support

* amg working

* fixup

* clean up

* readme

* update toctree

* fix type hint

* multiple fixes

* fixup

* fixes

* updates

* updates

* more tests

* few fixes

* change to `SamForMaskGeneration`

* doc

* fixup

* fix more tests

* multiple fixes

* fix CI tests

* refactor processor

* renamings

* draft the pipeline

* refactor

* fix tests

* fix test

* few cleanings

* fix test

* edit pipelien support chunking

* udate

* add slow tests

* fix nit

* fixup

* fix nit

* current chunk pipleine

* cast boxes in fp32

* nit

* current updates

* piepleine works

* fixup

* clean up config

* fix slow tests

* fix slow tests

* clean up

* update doc and pipeline

* adds more slow tests

* fix slow tests

* cleaning

* tests pass

* add docstring

* fix copies

* clean up

* support batch of images

* style

* dummy is needed, add tests

* fix slow tests

* fix CI

* update

* adds more tests

* fixes

* fixes

* fixup

* fixes

* few fixes

* filter

* few fixes

* some refactor

* touches finales

* fix

* style

* remove pipeline files

* fixes nits

* revert pipeline changes

* fix test

* fixup

* remove automodel for automatic mask generation

* fix failing torch tests

* update mdx

* revert removal of `MODEL_FOR_AUTOMATIC_MASK_GENERATION_MAPPING`

* update sam config based on review
Co-authored-by: amyeroberts <aeroberts4444@gmail.com>
Co-authored-by: sgugger <sylvain.gugger@gmail.com>

* update low_resolution_masks -> pred_masks
inti ln with layer_norm_eps
add_decomposed_rel_pos doc
forward doc of SamForMaskGeneration

* update processor docstring

* remove image processor import empty

* update for testing

* output vision hidden states + clean recomm
also test all iou values

* fixup

* fixup

* remove unused

* Update src/transformers/models/sam/modeling_sam.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update src/transformers/models/sam/image_processing_sam.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* nits

* fix

* fix CI tests and slow tests

* replace with Amy's processor

* clearer docstring

* add `SamVisionNeck`

* refactor - all CI tests should pass

* fix broken import on Gcolab

* few fixes here and there

* fix another bug

* fix more bugs

* update and merge

* correct ckpt

* address comments

* add tips

* revert

* fix docstring

* replace with `SamModel`

* make fixup

* add support for bathed images and batch ed points

* make fixup this time, really

* make fixup again and again

* few fixes here and there, this should be the touche finale

* Update docs/source/en/model_doc/sam.mdx

* fixup

* correct checkpoints

* correct name

* rm unneeded file

* add notebook

---------
Co-authored-by: younesbelkada <younesbelkada@gmail.com>
Co-authored-by: amyeroberts <aeroberts4444@gmail.com>
Co-authored-by: sgugger <sylvain.gugger@gmail.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
Co-authored-by: Younes Belkada <49240599+younesbelkada@users.noreply.github.com>

fix
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* initial work

* Add other classes

* Refactor code

* Move warning and fix dynamic pipeline

* Issue warning when necessary

* Add test

* Do not skip auto tests

* Fix failing tests

* Refactor and address review comments

* Address review comments

* working mvp

* remove breakpoint

* fix commit

* standardize outputs

* tmp commit

* tests almost ready

* tmp commit

* skip a few models

* Add streaming; Docs and examples

* document limitations

* PR commits

* Amy PR comments

* wrong argument name

* append eos_token_id

* all tokenizers need mask and ctc_blank tokens

* remove reduction factor from feature extractor

* add proper TTS loss

* did shifting the wrong way around

* mask out padded portions

* remove logits again (don't really need it)

* fix unit tests

* fixup

* pad also returns the decoder attention mask, since that's useful to have

* clean up feature extractor logic

* pad can handle TTS task too

* remove stop_labels from loss calculation

* simplify logic

* fixup

* do -100 masking properly

* small STFT optimization (calculate mel filterbanks only once)

* replace torchaudio fbanks with audio_utils

* remove torchaudio dependency

* simplify & speed up the STFT

* don't serialize window and mel filters

* output cross attentions when generating speech

* add guided attention loss

* fix failing test

* Update src/transformers/models/speecht5/feature_extraction_speecht5.py
Co-authored-by: Sanchit Gandhi <93869735+sanchit-gandhi@users.noreply.github.com>

* Update src/transformers/models/speecht5/modeling_speecht5.py
Co-authored-by: Sanchit Gandhi <93869735+sanchit-gandhi@users.noreply.github.com>

* change type annotation of attention_mask to LongTensor

* extract loss into class

* remove unused frame_signal_scale argument

* use config object in loss class

* fix type annotations in doc comments

* change optional to just bool

* implement missing tokenizer method

* add deprecation warning

* Update src/transformers/models/speecht5/feature_extraction_speecht5.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update src/transformers/models/speecht5/feature_extraction_speecht5.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* add deprecation warning for stop_labels

---------
Co-authored-by: Sanchit Gandhi <93869735+sanchit-gandhi@users.noreply.github.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

Revert "Use code on the Hub from another repo (#22698)"

This reverts commit ea7b0a53.

* fix

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* initial work

* Add other classes

* Refactor code

* Move warning and fix dynamic pipeline

* Issue warning when necessary

* Add test

* fix

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

fix
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* fix

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Add model to doc tests

* Remove generate and replace by prepare_inputs_for_generation

* More fixes

* Remove print statements

* Update integration tests

* Fix generate

* Remove model from auto mapping

* Use auto processor

* Fix integration tests

* Fix test

* Add inference code snippet

* Remove is_encoder_decoder

* Update docs

* Remove notebook link

* Fix docstrings for TFBLIP

* Fix missing line in TF port!

* Use values from torch tests now other bugs fixed

* Use values from torch tests now other bugs fixed

* Fix doctest string

* resolve conflicts

* rebase and make style

* test

* test

* test

* rebase and make style

* rebase and make style

* tests

* tests

* rewrite some functions

* rebase and make style

* fix load_tf_weights_in_cpmant

* reformat some unrelated files

* upgrade quality

* fix some bugs & docstring

* add models and tests

* solve conflicts

* resolve conflicts

* resolve conflicts

* resolve conflicts

* resolve conflicts

* tests

* resolve conflicts

* resolve conflicts

* fix load_tf_weights_in_cpmant

* reformat some unrelated files

* upgrade quality

* fix some bugs & docstring

* save resolution

* make style

* delete redefinition code

* reformat function

* reformat

* resolve conflicts

* resolve conflicts

* resolve conflicts

* resolve conflicts

* resolve conflicts

* tests

* resolve conflicts

* resolve conflicts

* fix load_tf_weights_in_cpmant

* reformat some unrelated files

* upgrade quality

* resolve conflicts

* resolve conflicts

* resolve conflicts

* resolve conflicts

* resolve conflicts

* fix load_tf_weights_in_cpmant

* reformat some unrelated files

* upgrade quality

* resolve conflicts

* make style

* fix bugs and refactor

* modify docstrings and make style

* unify import format in __init__.py

* fix import-altclp bug

* fix copies to update index.md

* fix unused config parameters

* fix unused config parameters

* fix unused config parameters

* update README_ja.md

* dummy commit for unit test

* fix attention mask

* add CPMAntTokenizer&-Fast to auto-mapping

* drop redundant changes in README_ko

* fix  defaults in docstring

* fix use_cache and some docstring

* add missing args in tokenizer

* modify tester inheritance

* add is_jieba_available

* fix some bugs

* make style and fix-copies

* add doctests

* skip integration tests

* add is_jieba_available

* fix bugs in common tests

* adjust docstrings and make style

* add argument docstring

* adjust code to some specifications

* make style and fix-copies

* add fast tokenization test

* dummy commit for unit test

* dummy commit for unit test

* dummy commit for unit test

* normalize some comments and names

* Bert->CPMAnt

* camel names and drop redundant codes

* make style and fix-coies

* add CpmTokenizerFast _import_structure

* drop cpmanttokenizerfast in model_doc

* fix some problems

* fix CPMAnt tokenization for common test

* make style and fixup

* fix copies and fixup

* fix bugs in tokenization test

* dummy commit for connection failure in unittest

* fix copies

* drop trailing comma

* fix decorator in tests

* dummy commit for connection failure in unittest

---------
Co-authored-by: Gong Baitao <gongbaitao11@gmail.com>

fix
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* add GPTNeoXForSequenceClassification

* move the labels to logits.device (ref: #22561)

* fix

* Add model with cli tool

* Remove unwanted stuff

* Add new code

* Remove inference runner

* Style

* Fix checks

* Test updates

* make fixup

* fix docs

* fix doc

* fix test

* hopefully fix pipeline tests

* refactor

* fix CIs

* add comment

* rename to `GPTBigCodeForCausalLM`

* correct readme

* make fixup + docs

* make fixup

* fixes

* fixes

* Remove pruning

* Remove import

* Doc updates

* More pruning removal

* Combine copies

* Single MQA implementation, remove kv cache pre-allocation and padding

* Update doc

* Revert refactor to match gpt2 style

* Merge back key and value caches, fix some type hints

* Update doc

* Fix position ids pith padding (PR 21080)

* Add conversion script temporarily

* Update conversion script

* Remove checkpoint conversion

* New model

* Fix MQA test

* Fix copies

* try fix tests

* FIX TEST!!

* remove  `DoubleHeadsModel`

* add MQA tests

* add slow tests

* clean up

* add CPU checker

* final fixes

* fixes

- fix GPU issue
- fixed slow tests
- skip disk offload

* fix final issue

* Simplify and comment baddbmm fix

* Remove unnecessary code

* Transpose tweaks

* Use beta=1 on cpu, improve tests

---------
Co-authored-by: younesbelkada <younesbelkada@gmail.com>

* Fix default attention mask size

* fixup

* add a test to make sure that even if attention mask are not provided, works

* style