GitLab

* Fix weight decay masking in `run_flax_glue.py`

Issues with the previous implementation:
- The `dict` from `traverse_util.flatten_dict` has keys which are tuples of strings, not one long string with the path separated by periods.
- `optax.masked` applies the transformation wherever the mask is True, so the masks are flipped.
- Flax's LayerNorm calls the scale parameter `scale` not `weight`

* Fix formatting with black

* adapt results
Co-authored-by: Patrick von Platen <patrick@huggingface.co>

Bumps [urllib3](https://github.com/urllib3/urllib3) from 1.25.8 to 1.26.5.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/1.25.8...1.26.5

)

---
updated-dependencies:
- dependency-name: urllib3
  dependency-type: direct:production
...
Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* modify qa-trainer

* fix flax model

* initial

* code quality test

* code quality

* added test functions in test_modeling_rag.py and test_retrieval_rag.py to test end2end retreiver

* minor change in test_modeling_rag

* fixed tests

* Update examples/research_projects/rag-end2end-retriever/README.md

typo corrected as suggested by lhoestq
Co-authored-by: Quentin Lhoest <42851186+lhoestq@users.noreply.github.com>

* Update examples/research_projects/rag-end2end-retriever/finetune_rag.py

type change suggested by lhoestq
Co-authored-by: Quentin Lhoest <42851186+lhoestq@users.noreply.github.com>

* Update src/transformers/models/rag/retrieval_rag.py

Adding this change as mentioned by lhoestq.
Co-authored-by: Quentin Lhoest <42851186+lhoestq@users.noreply.github.com>

* completed the minor changes suggested by the reviewers
Co-authored-by: Quentin Lhoest <42851186+lhoestq@users.noreply.github.com>

* Add MT5ForConditionalGeneration as supported arch.

* Update README.md

* Remove redundant `nn.log_softmax` in `run_flax_glue.py`

`optax.softmax_cross_entropy` expects unnormalized logits, and so it already calls `nn.log_softmax`, so I believe it is not needed here. `nn.log_softmax` is idempotent so mathematically it shouldn't have made a difference.

* Remove unused 'flax.linen' import

* create custom model on the flight

* better wording

* add update_from_string

* cleanup

* cleanup

* Update src/transformers/configuration_utils.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* more bool options

* style

* fix logger

* add test

* add the doc

* assert on conflict of options
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* fix overflow in perplexity calc

* use inf

* fix

* Add option to long only once in multinode training

* Use an alternate property

* fix_torch_device_generate_test

* remove @

* change pytorch import to flax import

* fix_torch_device_generate_test

* remove @

* add flax glue link

* fix_torch_device_generate_test

* remove @

* correct best seed for flax fine-tuning
Co-authored-by: Patrick von Platen <patrick@huggingface.co>

* speed up flax glue

* remove unnecessary line

* remove folder

* remove run in loop
Co-authored-by: Patrick von Platen <patrick@huggingface.co>

* add separator for windows

* fixes test_is_copy_consistent on Windows

* fixing writing encoding issue on extended test (for Windows)

* resolving comments

* refactor

* update

* update

* update

* refactor run mlm

* finalize

* refactor more

* fix typo

* update

* finish refactor

* modify run mlm

* Apply suggestions from code review

* Apply suggestions from code review

* Apply suggestions from code review

* small fixes

* upload

* upload

* finish run mlm script
Co-authored-by: Patrick von Platen <patrick@huggingface.co>

* Add Flax Examples README

* Apply suggestions from code review

* Update examples/flax/README.md

* add nice table

* fix

* fix

* apply suggestions

* upload

* finish flax readme.md
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* add `dataset_name` to data_args and added accuracy metric

* added documentation for dataset_name

* spelling correction

* add headers to main doc

* Apply suggestions from code review

* update

* upload

* Add Cloud details to README

* Flax script and readme updates

* Some simplifications of Flax script

* Add Cloud details to README

* Flax script and readme updates

* Adds Flax BERT finetuning example

* fix traced jax tensor type

* Use Optax losses and learning schedulers

* Add 1GPU training results

* merge into master & make style

* fix input

* del file

* Fix bug in loss and add torch runs

* finish bert flax fine-tune

* Update examples/flax/text-classification/README.md

* Update examples/flax/text-classification/run_flax_glue.py

* add requirements

* finalize

* finalize
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
Co-authored-by: Patrick von Platen <patrick@huggingface.co>

* Autogenerate model cards from the Trainer

* ModelCard deprecated

* Fix test

* Style

* Apply suggestions from code review
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Address review comments

* Quality

* With all metadata

* Metadata

* Post-merge conflict mess

* Data args and all examples

* Default license and languages when possible
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* restore conftest.py

* fix conftest and make copies

* remove unneeded parts

* remove unwanted files