GitLab

* add arg

---------
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Fix vision text dual encoder

* Small cleanup for wav2vec2 (not fixed yet)

* Small fix for vision_encoder_decoder

* Fix SAM builds

* Update TFBertTokenizer test with modern exporting + tokenizer

* Fix DeBERTa

* Fix DeBERTav2

* Try RAG fix but it's impossible to test locally

* Actually fix RAG now that I got FAISS working somehow

* Fix Wav2Vec2, add sermon

* Fix Hubert

* Fix one BLIP arg not being optional, remove misspelled arg

* Remove the lxmert test overrides and just use the base test_saved_model_creation

* saved_model_creation fixes and re-enabling tests across the board

* Remove unnecessary skip

* Stop caching sinusoidal embeddings in speech_to_text

* Fix transfo_xl compilation

* Fix transfo_xl compilation

* Fix the conditionals in xglm

* Set the save spec only when building

* Clarify comment

* Move comment correctly

* Correct embeddings generation for speech2text

* Mark RAG generation tests as @slow

* Remove redundant else:

* Add comment to clarify the save_spec line in build()

* Fix size tests for XGLM at last!

* make fixup

* Remove one band_part operation

* Mark test_keras_fit as @slow

* Stop storing references to bound methods in tf.functions

* Remove the gc.collect calls now that we resolved the underlying problem

* Remove the default signature from model.serving entirely, big cleanup

* Remove _prune_signature as self.input_signature can prune itself

* Restore serving docstring

* Update int support test to check the input signature

* Make sure other tests also use model.input_signature and not serving.input_signature

* Restore _prune_signature

* Remove the doctest GC now it's no longer needed

* Correct core tests to use the pruned sig

* order lines correctly in core tests

* Add eager_serving back with a deprecation warning

fix
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Rework TF type hints to use | None instead of Optional[] for tf.Tensor

* Rework TF type hints to use | None instead of Optional[] for tf.Tensor

* Don't forget the imports

* Add the imports to tests too

* make fixup

* Refactor tests that depended on get_type_hints

* Better test refactor

* Fix an old hidden bug in the test_keras_fit input creation code

* Fix for the Deit tests

begone slow tests

* Result of black 23.1

* Update target to Python 3.7

* Switch flake8 to ruff

* Configure isort

* Configure isort

* Apply isort with line limit

* Put the right black version

* adapt black in check copies

* Fix copies

Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* move test model folders (TODO: fix imports and others)

* fix (potentially partially) imports (in model test modules)

* fix (potentially partially) imports (in tokenization test modules)

* fix (potentially partially) imports (in feature extraction test modules)

* fix import utils.test_modeling_tf_core

* fix path ../fixtures/

* fix imports about generation.test_generation_flax_utils

* fix more imports

* fix fixture path

* fix get_test_dir

* update module_to_test_file

* fix get_tests_dir from wrong transformers.utils

* update config.yml (CircleCI)

* fix style

* remove missing imports

* update new model script

* update check_repo

* update SPECIAL_MODULE_TO_TEST_MAP

* fix style

* add __init__

* update self-scheduled

* fix add_new_model scripts

* check one way to get location back

* python setup.py build install

* fix import in test auto

* update self-scheduled.yml

* update slack notification script

* Add comments about artifact names

* fix for yolos
Co-authored-by: ydshieh <ydshieh@users.noreply.github.com>

* Split file_utils in several submodules

* Fixes

* Add back more objects

* More fixes

* Who exactly decided to import that from there?

* Second suggestion to code with code review

* Revert wront move

* Fix imports

* Adapt all imports

* Adapt all imports everywhere

* Revert this import, will fix in a separate commit

* Per-folder tests reorganization
Co-authored-by: sgugger <sylvain.gugger@gmail.com>
Co-authored-by: Stas Bekman <stas@stason.org>

* [doc] :class: hunt

* Apply suggestions from code review
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* fix the fix + style
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* TF model exists for Blenderbot 400M

* Marian

* RAG

* Create modeling_tf_dpr.py

* Add TFDPR

* Add back TFPegasus, TFMarian, TFMBart, TFBlenderBot

last commit accidentally deleted these 4 lines, so I recover them back

* Add TFDPR

* Add TFDPR

* clean up some comments, add TF input-style doc string

* Add TFDPR

* Make return_dict=False as default

* Fix return_dict bug (in .from_pretrained)

* Add get_input_embeddings()

* Create test_modeling_tf_dpr.py

The current version is already passed all 27 tests!
Please see the test run at : 
https://colab.research.google.com/drive/1czS_m9zy5k-iSJbzA_DP1k1xAAC_sdkf?usp=sharing



* fix quality

* delete init weights

* run fix copies

* fix repo consis

* del config_class, load_tf_weights

They shoud be 'pytorch only'

* add config_class back

after removing it, test failed ... so totally only removing "use_tf_weights = None" on Lysandre suggestion

* newline after .. note::

* import tf, np (Necessary for ModelIntegrationTest)

* slow_test from_pretrained with from_pt=True

At the moment we don't have TF weights (since we don't have official official TF model)
Previously, I did not run slow test, so I missed this bug

* Add simple TFDPRModelIntegrationTest

Note that this is just a test that TF and Pytorch gives approx. the same output.
However, I could not test with the official DPR repo's output yet

* upload correct tf model

* remove position_ids as missing keys

* create modeling_tf_rag

* add tests for tf

* add tf tests

* revert wrong pt commit

* further refactor

* further refactor

* refactor

* Update modeling_tf_rag.py

- input_processing
- fix prepare_input_for_generation (mostly fix generate bug)
- bring back from_pretrained hack in order to test generate

* delete colab pieces of code

* Show case of greedy "generate"

Temporarily change from beam_search test to greedy_search test to show case that TF and PT do get equivalent output.

* cosmetic update

* correct typos

* update

* push some progress

* make easy check

* fix rag save from pretrained

* Update src/transformers/modeling_tf_utils.py

* remove commented out lines

* delete unnecessary lines

* add simple test case for nq_checkpoint

Add nq_checkpoint test to show that current version without hack still fails

* temporarily put ugly hack back again

* Add TFRagSequenceForGeneration!!

* __init__.py , import TFRagSequenceForGeneration

* Add TFRagSequence tests!

* rag init.py - add TFRagSequenceForGeneration

* fix from_pretrained

* fix prepare_inputs_for_generation

* Beam search for RagToken!

* minor clean up

* add tf.cast in TFRagModel

* More tf.cast

* Add all remaining tests (still have issues)

* delete all T5 related

* make style

* fix load weight prefix

* fix bart

* fix return_dict for tf_rag

make all tests pass .. Hooray

* fix some tests

* fix code quality

* fix qualtiy check

* finish tests tf rag

* add tf rag to docs

* remove TFT5 from docstring
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* remove TFT5 from docstring
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Delete outdated comments
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* improve doc strings

* add generative model classes

* fix adjust token logic

* refactor generate for TFRag

* using shape_list, not _get_shape
Co-authored-by: Julien Plu <plu.julien@gmail.com>

* axis=[1]->axis=1

* delete NEED_HELP comment

* improve readability
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* improve readability
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* improve readability
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Indicating model is in a developing state in docstrings

As suggested by Julien

* small last changes

* apply sylvains suggestions

* finish tf rag
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
Co-authored-by: patrickvonplaten <patrick@huggingface.co>
Co-authored-by: Julien Plu <plu.julien@gmail.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Create modeling_tf_dpr.py

* Add TFDPR

* Add back TFPegasus, TFMarian, TFMBart, TFBlenderBot

last commit accidentally deleted these 4 lines, so I recover them back

* Add TFDPR

* Add TFDPR

* clean up some comments, add TF input-style doc string

* Add TFDPR

* Make return_dict=False as default

* Fix return_dict bug (in .from_pretrained)

* Add get_input_embeddings()

* Create test_modeling_tf_dpr.py

The current version is already passed all 27 tests!
Please see the test run at : 
https://colab.research.google.com/drive/1czS_m9zy5k-iSJbzA_DP1k1xAAC_sdkf?usp=sharing



* fix quality

* delete init weights

* run fix copies

* fix repo consis

* del config_class, load_tf_weights

They shoud be 'pytorch only'

* add config_class back

after removing it, test failed ... so totally only removing "use_tf_weights = None" on Lysandre suggestion

* newline after .. note::

* import tf, np (Necessary for ModelIntegrationTest)

* slow_test from_pretrained with from_pt=True

At the moment we don't have TF weights (since we don't have official official TF model)
Previously, I did not run slow test, so I missed this bug

* Add simple TFDPRModelIntegrationTest

Note that this is just a test that TF and Pytorch gives approx. the same output.
However, I could not test with the official DPR repo's output yet

* upload correct tf model

* remove position_ids as missing keys

* fix RagSeq generate with context_input_ids

fix RagSeq generate with context_input_ids

* apply style

* delete unused lines

* Add test_rag_sequence_generate_batch_from_context_input_ids

* Readability improved

* stylying

* Stylize

* typos

* add check_model_generate_from_context_input_ids

* make style

* Apply suggestions from code review

* make style2
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
Co-authored-by: patrickvonplaten <patrick@huggingface.co>

* fix rag

* fix slow test

* fix past in bart

* remove make on the fly linear embedding

* start refactor

* big first refactor

* save intermediate

* save intermediat

* correct mask issue

* save tests

* refactor padding masks

* make all tests pass

* further refactor

* make pegasus test pass

* fix bool if

* fix leftover tests

* continue

* bart renaming

* delete torchscript test hack

* fix imports in tests

* correct shift

* fix docs and repo cons

* re-add fix for FSTM

* typo in test

* fix typo

* fix another typo

* continue

* hot fix 2 for tf

* small fixes

* refactor types linting

* continue

* finish refactor

* fix import in tests

* better bart names

* further refactor and add test

* delete hack

* apply sylvains and lysandres commens

* small perf improv

* further perf improv

* improv perf

* fix typo

* make style

* small perf improv

* Add T5 Encoder class for feature extraction

* fix T5 encoder add_start_docstrings indent

* update init with T5 encoder

* update init with TFT5ModelEncoder

* remove TFT5ModelEncoder

* change T5ModelEncoder order in init

* add T5ModelEncoder to transformers init

* clean T5ModelEncoder

* update init with TFT5ModelEncoder

* add TFModelEncoder for Tensorflow

* update init with TFT5ModelEncoder

* Update src/transformers/models/t5/modeling_t5.py

change output from Seq2SeqModelOutput to BaseModelOutput
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* remove encoder_outputs

1. remove encoder_outputs from the function call.
2. remove the encoder_outputs If statement.
3. remove isinstance from return_dict.

* Authorize missing decoder keys

* remove unnecessary input parameters

remove pask_key_values and use_cache

* remove use_cache

remove use_cache from the forward method

* add doctoring for T5 encoder

add doctoring for T5 encoder with T5_ENCODER_INPUTS_DOCSTRING

* change return_dict to dot access

* add T5_ENCODER_INPUTS_DOCSTRING for TF T5

* change TFT5Encoder output type to BaseModelOutput

* remove unnecessary parameters for TFT5Encoder

* remove unnecessary if statement

* add import BaseModelOutput

* fix BaseModelOutput typo to TFBaseModelOutput

* update T5 doc with T5ModelEncoder

* add T5ModelEncoder to tests

* finish pytorch

* finish docs and mt5

* add mtf to init

* fix init

* remove n_positions

* finish PR

* Update src/transformers/models/mt5/modeling_mt5.py
Co-authored-by: Lysandre Debut <lysandre@huggingface.co>

* Update src/transformers/models/t5/modeling_t5.py
Co-authored-by: Lysandre Debut <lysandre@huggingface.co>

* Update src/transformers/models/t5/modeling_tf_t5.py
Co-authored-by: Lysandre Debut <lysandre@huggingface.co>

* Update src/transformers/models/mt5/modeling_tf_mt5.py
Co-authored-by: Lysandre Debut <lysandre@huggingface.co>

* make style
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
Co-authored-by: Lysandre Debut <lysandre@huggingface.co>

* Put models in subfolders

* Styling

* Fix imports in tests

* More fixes in test imports

* Sneaky hidden imports

* Fix imports in doc files

* More sneaky imports

* Finish fixing tests

* Fix examples

* Fix path for copies

* More fixes for examples

* Fix dummy files

* More fixes for example

* More model import fixes

* Is this why you're unhappy GitHub?

* Fix imports in conver command

* s|multiple_gpu|multi_gpu|g; s|multigpu|multi_gpu|g'

* doc

* Test TF GPU CI

* Change cache

* Fix missing torch requirement

* Fix some model tests


Style

* LXMERT

* MobileBERT

* Longformer skip test

* XLNet

* The rest of the tests

* RAG goes OOM in multi gpu setup

* YAML test files

* Last fixes

* Skip doctests

* Fill mask tests

* Yaml files

* Last test fix

* Style

* Update cache

* Change ONNX tests to slow + use tiny model

* Propagating n_docs as parameter to all RagModel's related functions that defaults to self.config.n_docs

* Making n_docs parameter's default value to None in marginalize function

* Fixing code quality issues

* Handle the special case when generator is of T5PreTrainedModel instance type. T5PreTrainedModel do not have n_docs as parameter

* T5PreTrainedModel do not have n_docs as parameter

* Addressing review comment
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Correcting comment by addressing review comment

* Adding assert statement verifying that n_docs is correctly set. n_docs should be the same for both retriever and generator.

* Fixing flake8 reported issue

* Correcting test datasets for rag

* Using doc_scores instead of context_input_ids to check assert as in RagSequenceForGeneration context_input_ids can be null

* doc_scores second dimension have number of retrieved docs

* Changing assert comment

* Apply suggestions from code review
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* splitting fast and slow tokenizers [WIP]

* [WIP] splitting sentencepiece and tokenizers dependencies

* update dummy objects

* add name_or_path to models and tokenizers

* prefix added to file names

* prefix

* styling + quality

* spliting all the tokenizer files - sorting sentencepiece based ones

* update tokenizer version up to 0.9.0

* remove hard dependency on sentencepiece 🎉

* and removed hard dependency on tokenizers 🎉



* update conversion script

* update missing models

* fixing tests

* move test_tokenization_fast to main tokenization tests - fix bugs

* bump up tokenizers

* fix bert_generation

* update ad fix several tokenizers

* keep sentencepiece in deps for now

* fix funnel and deberta tests

* fix fsmt

* fix marian tests

* fix layoutlm

* fix squeezebert and gpt2

* fix T5 tokenization

* fix xlnet tests

* style

* fix mbart

* bump up tokenizers to 0.9.2

* fix model tests

* fix tf models

* fix seq2seq examples

* fix tests without sentencepiece

* fix slow => fast  conversion without sentencepiece

* update auto and bert generation tests

* fix mbart tests

* fix auto and common test without tokenizers

* fix tests without tokenizers

* clean up tests lighten up when tokenizers + sentencepiece are both off

* style quality and tests fixing

* add sentencepiece to doc/examples reqs

* leave sentencepiece on for now

* style quality split hebert and fix pegasus

* WIP Herbert fast

* add sample_text_no_unicode and fix hebert tokenization

* skip FSMT example test for now

* fix style

* fix fsmt in example tests

* update following Lysandre and Sylvain's comments

* Update src/transformers/testing_utils.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update src/transformers/testing_utils.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update src/transformers/tokenization_utils_base.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Update src/transformers/tokenization_utils_base.py
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>

* Fix retrieval offset in RAG's HfIndex

* update slow tests

* style

* fix new test

* style

* add better tests
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* added rag WIP

* path fix

* Formatting / renaming prior to actual work

* added rag WIP

* path fix

* Formatting / renaming prior to actual work

* added rag WIP

* path fix

* Formatting / renaming prior to actual work

* added rag WIP

* Formatting / renaming prior to actual work

* First commit

* improve comments

* Retrieval evaluation scripts

* refactor to include modeling outputs + MPI retriever

* Fix rag-token model + refactor

* Various fixes + finetuning logic

* use_bos fix

* Retrieval refactor

* Finetuning refactoring and cleanup

* Add documentation and cleanup

* Remove set_up_rag_env.sh file

* Fix retrieval wit HF index

* Fix import errors

* Fix quality errors

* Refactor as per suggestions in https://github.com/huggingface/transformers/pull/6813#issuecomment-687208867



* fix quality

* Fix RAG Sequence generation

* minor cleanup plus initial tests

* fix test

* fix tests 2

* Comments fix

* post-merge fixes

* Improve readme + post-rebase refactor

* Extra dependencied for tests

* Fix tests

* Fix tests 2

* Refactor test requirements

* Fix tests 3

* Post-rebase refactor

* rename nlp->datasets

* RAG integration tests

* add tokenizer to slow integration test and allow retriever to run on cpu

* add tests; fix position ids warning

* change structure

* change structure

* add from encoder generator

* save working solution

* make all integration tests pass

* add RagTokenizer.save/from_pretrained and RagRetriever.save/from_pretrained

* don't save paths

* delete unnecessary imports

* pass config to AutoTokenizer.from_pretrained for Rag tokenizers

* init wiki_dpr only once

* hardcode legacy index and passages paths (todo: add the right urls)

* finalize config

* finalize retriver api and config api

* LegacyIndex index download refactor

* add dpr to autotokenizer

* make from pretrained more flexible

* fix ragfortokengeneration

* small name changes in tokenizer

* add labels to models

* change default index name

* add retrieval tests

* finish token generate

* align test with previous version and make all tests pass

* add tests

* finalize tests

* implement thoms suggestions

* add first version of test

* make first tests work

* make retriever platform agnostic

* naming

* style

* add legacy index URL

* docstrings + simple retrieval test for distributed

* clean model api

* add doc_ids to retriever's outputs

* fix retrieval tests

* finish model outputs

* finalize model api

* fix generate problem for rag

* fix generate for other modles

* fix some tests

* save intermediate

* set generate to default

* big refactor generate

* delete rag_api

* correct pip faiss install

* fix auto tokenization test

* fix faiss install

* fix test

* move the distributed logic to examples

* model page

* docs

* finish tests

* fix dependencies

* fix import in __init__

* Refactor eval_rag and finetune scripts

* start docstring

* add psutil to test

* fix tf test

* move require torch to top

* fix retrieval test

* align naming

* finish automodel

* fix repo consistency

* test ragtokenizer save/load

* add rag model output docs

* fix ragtokenizer save/load from pretrained

* fix tokenizer dir

* remove torch in retrieval

* fix docs

* fixe finetune scripts

* finish model docs

* finish docs

* remove auto model for now

* add require torch

* remove solved todos

* integrate sylvains suggestions

* sams comments

* correct mistake on purpose

* improve README

* Add generation test cases

* fix rag token

* clean token generate

* fix test

* add note to test

* fix attention mask

* add t5 test for rag

* Fix handling prefix in finetune.py

* don't overwrite index_name
Co-authored-by: Patrick Lewis <plewis@fb.com>
Co-authored-by: Aleksandra Piktus <piktus@devfair0141.h2.fair>
Co-authored-by: Aleksandra Piktus <piktus@learnfair5102.h2.fair>
Co-authored-by: Aleksandra Piktus <piktus@learnfair5067.h2.fair>
Co-authored-by: Your Name <you@example.com>
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
Co-authored-by: Quentin Lhoest <lhoest.q@gmail.com>