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Unverified Commit f3d2f7a6 authored by NielsRogge's avatar NielsRogge Committed by GitHub
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Add MarkupLM (#19198) 



* First draft

* Make basic test work

* Fix most tokenizer tests

* More improvements

* Make more tests pass

* Fix more tests

* Fix some code quality

* Improve truncation

* Implement feature extractor

* Improve feature extractor and add tests

* Improve feature extractor tests

* Fix pair_input test partly

* Add fast tokenizer

* Improve implementation

* Fix rebase

* Fix rebase

* Fix most of the tokenizer tests.

* propose solution for fast

* add: integration test for fasttokenizer, warning for decode, fix template in slow tokenizer

* add: modify markuplmconverter

* add: some modify on converter and tokenizerfast

* Fix style, copies

* Make fixup

* Update tokenization_markuplm.py

* Update test_tokenization_markuplm.py

* Update markuplm related

* Improve processor, add integration test

* Add processor test file

* Improve processor

* Improve processor tests

* Fix more processor tests

* Fix processor tests

* Update docstrings

* Add Copied from statements

* Add more Copied from statements

* Add code examples

* Improve code examples

* Add model to doc tests

* Adding dependency check

* Add dummy file

* Add requires_backends

* Add model to toctree

* Fix more things, disable dependency check for now

* Apply more suggestions

* Add soft dependency

* Add annotators to tests

* Fix style

* Remove from_slow=True

* Remove print statements

* Add sanity check

* Fix processor test

* Fix processor tests, add more docs

* Add doc tests for mdx file

* Add more tips

* Apply suggestions
Co-authored-by: default avatarNiels Rogge <nielsrogge@Nielss-MacBook-Pro.local>
Co-authored-by: default avatarlockon-n <45759388+lockon-n@users.noreply.github.com>
Co-authored-by: default avatarSaulLu <lucilesaul.com@gmail.com>
Co-authored-by: default avatarlockon-n <dd098309@126.com>
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README.md
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......@@ -328,6 +328,7 @@ Current number of checkpoints: ![](https://img.shields.io/endpoint?url=https://h
1. **[M-CTC-T](https://huggingface.co/docs/transformers/model_doc/mctct)** (from Facebook) released with the paper [Pseudo-Labeling For Massively Multilingual Speech Recognition](https://arxiv.org/abs/2111.00161) by Loren Lugosch, Tatiana Likhomanenko, Gabriel Synnaeve, and Ronan Collobert.
1. **[M2M100](https://huggingface.co/docs/transformers/model_doc/m2m_100)** (from Facebook) released with the paper [Beyond English-Centric Multilingual Machine Translation](https://arxiv.org/abs/2010.11125) by Angela Fan, Shruti Bhosale, Holger Schwenk, Zhiyi Ma, Ahmed El-Kishky, Siddharth Goyal, Mandeep Baines, Onur Celebi, Guillaume Wenzek, Vishrav Chaudhary, Naman Goyal, Tom Birch, Vitaliy Liptchinsky, Sergey Edunov, Edouard Grave, Michael Auli, Armand Joulin.
1. **[MarianMT](https://huggingface.co/docs/transformers/model_doc/marian)** Machine translation models trained using [OPUS](http://opus.nlpl.eu/) data by Jörg Tiedemann. The [Marian Framework](https://marian-nmt.github.io/) is being developed by the Microsoft Translator Team.
1. **[MarkupLM](https://huggingface.co/docs/transformers/main/model_doc/markuplm)** (from Microsoft Research Asia) released with the paper [MarkupLM: Pre-training of Text and Markup Language for Visually-rich Document Understanding](https://arxiv.org/abs/2110.08518) by Junlong Li, Yiheng Xu, Lei Cui, Furu Wei.
1. **[MaskFormer](https://huggingface.co/docs/transformers/model_doc/maskformer)** (from Meta and UIUC) released with the paper [Per-Pixel Classification is Not All You Need for Semantic Segmentation](https://arxiv.org/abs/2107.06278) by Bowen Cheng, Alexander G. Schwing, Alexander Kirillov.
1. **[mBART](https://huggingface.co/docs/transformers/model_doc/mbart)** (from Facebook) released with the paper [Multilingual Denoising Pre-training for Neural Machine Translation](https://arxiv.org/abs/2001.08210) by Yinhan Liu, Jiatao Gu, Naman Goyal, Xian Li, Sergey Edunov, Marjan Ghazvininejad, Mike Lewis, Luke Zettlemoyer.
1. **[mBART-50](https://huggingface.co/docs/transformers/model_doc/mbart)** (from Facebook) released with the paper [Multilingual Translation with Extensible Multilingual Pretraining and Finetuning](https://arxiv.org/abs/2008.00401) by Yuqing Tang, Chau Tran, Xian Li, Peng-Jen Chen, Naman Goyal, Vishrav Chaudhary, Jiatao Gu, Angela Fan.
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README_ko.md
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......@@ -278,6 +278,7 @@ Flax, PyTorch, TensorFlow 설치 페이지에서 이들을 conda로 설치하는
1. **[M-CTC-T](https://huggingface.co/docs/transformers/model_doc/mctct)** (from Facebook) released with the paper [Pseudo-Labeling For Massively Multilingual Speech Recognition](https://arxiv.org/abs/2111.00161) by Loren Lugosch, Tatiana Likhomanenko, Gabriel Synnaeve, and Ronan Collobert.
1. **[M2M100](https://huggingface.co/docs/transformers/model_doc/m2m_100)** (from Facebook) released with the paper [Beyond English-Centric Multilingual Machine Translation](https://arxiv.org/abs/2010.11125) by Angela Fan, Shruti Bhosale, Holger Schwenk, Zhiyi Ma, Ahmed El-Kishky, Siddharth Goyal, Mandeep Baines, Onur Celebi, Guillaume Wenzek, Vishrav Chaudhary, Naman Goyal, Tom Birch, Vitaliy Liptchinsky, Sergey Edunov, Edouard Grave, Michael Auli, Armand Joulin.
1. **[MarianMT](https://huggingface.co/docs/transformers/model_doc/marian)** Machine translation models trained using [OPUS](http://opus.nlpl.eu/) data by Jörg Tiedemann. The [Marian Framework](https://marian-nmt.github.io/) is being developed by the Microsoft Translator Team.
1. **[MarkupLM](https://huggingface.co/docs/transformers/main/model_doc/markuplm)** (from Microsoft Research Asia) released with the paper [MarkupLM: Pre-training of Text and Markup Language for Visually-rich Document Understanding](https://arxiv.org/abs/2110.08518) by Junlong Li, Yiheng Xu, Lei Cui, Furu Wei.
1. **[MaskFormer](https://huggingface.co/docs/transformers/model_doc/maskformer)** (from Meta and UIUC) released with the paper [Per-Pixel Classification is Not All You Need for Semantic Segmentation](https://arxiv.org/abs/2107.06278) by Bowen Cheng, Alexander G. Schwing, Alexander Kirillov.
1. **[mBART](https://huggingface.co/docs/transformers/model_doc/mbart)** (from Facebook) released with the paper [Multilingual Denoising Pre-training for Neural Machine Translation](https://arxiv.org/abs/2001.08210) by Yinhan Liu, Jiatao Gu, Naman Goyal, Xian Li, Sergey Edunov, Marjan Ghazvininejad, Mike Lewis, Luke Zettlemoyer.
1. **[mBART-50](https://huggingface.co/docs/transformers/model_doc/mbart)** (from Facebook) released with the paper [Multilingual Translation with Extensible Multilingual Pretraining and Finetuning](https://arxiv.org/abs/2008.00401) by Yuqing Tang, Chau Tran, Xian Li, Peng-Jen Chen, Naman Goyal, Vishrav Chaudhary, Jiatao Gu, Angela Fan.
......
README_zh-hans.md
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......@@ -302,7 +302,8 @@ conda install -c huggingface transformers
1. **[M-CTC-T](https://huggingface.co/docs/transformers/model_doc/mctct)** (来自 Facebook) 伴随论文 [Pseudo-Labeling For Massively Multilingual Speech Recognition](https://arxiv.org/abs/2111.00161) 由 Loren Lugosch, Tatiana Likhomanenko, Gabriel Synnaeve, and Ronan Collobert 发布。
1. **[M2M100](https://huggingface.co/docs/transformers/model_doc/m2m_100)** (来自 Facebook) 伴随论文 [Beyond English-Centric Multilingual Machine Translation](https://arxiv.org/abs/2010.11125) 由 Angela Fan, Shruti Bhosale, Holger Schwenk, Zhiyi Ma, Ahmed El-Kishky, Siddharth Goyal, Mandeep Baines, Onur Celebi, Guillaume Wenzek, Vishrav Chaudhary, Naman Goyal, Tom Birch, Vitaliy Liptchinsky, Sergey Edunov, Edouard Grave, Michael Auli, Armand Joulin 发布。
1. **[MarianMT](https://huggingface.co/docs/transformers/model_doc/marian)** 用 [OPUS](http://opus.nlpl.eu/) 数据训练的机器翻译模型由 Jörg Tiedemann 发布。[Marian Framework](https://marian-nmt.github.io/) 由微软翻译团队开发。
1. **[MaskFormer](https://huggingface.co/docs/transformers/model_doc/maskformer)** (from Meta and UIUC) released with the paper [Per-Pixel Classification is Not All You Need for Semantic Segmentation](https://arxiv.org/abs/2107.06278) by Bowen Cheng, Alexander G. Schwing, Alexander Kirillov
1. **[MarkupLM](https://huggingface.co/docs/transformers/main/model_doc/markuplm)** (来自 Microsoft Research Asia) 伴随论文 [MarkupLM: Pre-training of Text and Markup Language for Visually-rich Document Understanding](https://arxiv.org/abs/2110.08518) 由 Junlong Li, Yiheng Xu, Lei Cui, Furu Wei 发布。
1. **[MaskFormer](https://huggingface.co/docs/transformers/model_doc/maskformer)** (from Meta and UIUC) released with the paper [Per-Pixel Classification is Not All You Need for Semantic Segmentation](https://arxiv.org/abs/2107.06278) by Bowen Cheng, Alexander G. Schwing, Alexander Kirillov >>>>>>> Fix rebase
1. **[mBART](https://huggingface.co/docs/transformers/model_doc/mbart)** (来自 Facebook) 伴随论文 [Multilingual Denoising Pre-training for Neural Machine Translation](https://arxiv.org/abs/2001.08210) 由 Yinhan Liu, Jiatao Gu, Naman Goyal, Xian Li, Sergey Edunov, Marjan Ghazvininejad, Mike Lewis, Luke Zettlemoyer 发布。
1. **[mBART-50](https://huggingface.co/docs/transformers/model_doc/mbart)** (来自 Facebook) 伴随论文 [Multilingual Translation with Extensible Multilingual Pretraining and Finetuning](https://arxiv.org/abs/2008.00401) 由 Yuqing Tang, Chau Tran, Xian Li, Peng-Jen Chen, Naman Goyal, Vishrav Chaudhary, Jiatao Gu, Angela Fan 发布。
1. **[Megatron-BERT](https://huggingface.co/docs/transformers/model_doc/megatron-bert)** (来自 NVIDIA) 伴随论文 [Megatron-LM: Training Multi-Billion Parameter Language Models Using Model Parallelism](https://arxiv.org/abs/1909.08053) 由 Mohammad Shoeybi, Mostofa Patwary, Raul Puri, Patrick LeGresley, Jared Casper and Bryan Catanzaro 发布。
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README_zh-hant.md
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......@@ -314,6 +314,7 @@ conda install -c huggingface transformers
1. **[M-CTC-T](https://huggingface.co/docs/transformers/model_doc/mctct)** (from Facebook) released with the paper [Pseudo-Labeling For Massively Multilingual Speech Recognition](https://arxiv.org/abs/2111.00161) by Loren Lugosch, Tatiana Likhomanenko, Gabriel Synnaeve, and Ronan Collobert.
1. **[M2M100](https://huggingface.co/docs/transformers/model_doc/m2m_100)** (from Facebook) released with the paper [Beyond English-Centric Multilingual Machine Translation](https://arxiv.org/abs/2010.11125) by Angela Fan, Shruti Bhosale, Holger Schwenk, Zhiyi Ma, Ahmed El-Kishky, Siddharth Goyal, Mandeep Baines, Onur Celebi, Guillaume Wenzek, Vishrav Chaudhary, Naman Goyal, Tom Birch, Vitaliy Liptchinsky, Sergey Edunov, Edouard Grave, Michael Auli, Armand Joulin.
1. **[MarianMT](https://huggingface.co/docs/transformers/model_doc/marian)** Machine translation models trained using [OPUS](http://opus.nlpl.eu/) data by Jörg Tiedemann. The [Marian Framework](https://marian-nmt.github.io/) is being developed by the Microsoft Translator Team.
1. **[MarkupLM](https://huggingface.co/docs/transformers/main/model_doc/markuplm)** (from Microsoft Research Asia) released with the paper [MarkupLM: Pre-training of Text and Markup Language for Visually-rich Document Understanding](https://arxiv.org/abs/2110.08518) by Junlong Li, Yiheng Xu, Lei Cui, Furu Wei.
1. **[MaskFormer](https://huggingface.co/docs/transformers/model_doc/maskformer)** (from Meta and UIUC) released with the paper [Per-Pixel Classification is Not All You Need for Semantic Segmentation](https://arxiv.org/abs/2107.06278) by Bowen Cheng, Alexander G. Schwing, Alexander Kirillov
1. **[mBART](https://huggingface.co/docs/transformers/model_doc/mbart)** (from Facebook) released with the paper [Multilingual Denoising Pre-training for Neural Machine Translation](https://arxiv.org/abs/2001.08210) by Yinhan Liu, Jiatao Gu, Naman Goyal, Xian Li, Sergey Edunov, Marjan Ghazvininejad, Mike Lewis, Luke Zettlemoyer.
1. **[mBART-50](https://huggingface.co/docs/transformers/model_doc/mbart)** (from Facebook) released with the paper [Multilingual Translation with Extensible Multilingual Pretraining and Finetuning](https://arxiv.org/abs/2008.00401) by Yuqing Tang, Chau Tran, Xian Li, Peng-Jen Chen, Naman Goyal, Vishrav Chaudhary, Jiatao Gu, Angela Fan.
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docs/source/en/_toctree.yml
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......@@ -279,6 +279,8 @@
title: M2M100
- local: model_doc/marian
title: MarianMT
- local: model_doc/markuplm
title: MarkupLM
- local: model_doc/mbart
title: MBart and MBart-50
- local: model_doc/megatron-bert
......
docs/source/en/index.mdx
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......@@ -118,6 +118,7 @@ The documentation is organized into five sections:
1. **[M-CTC-T](model_doc/mctct)** (from Facebook) released with the paper [Pseudo-Labeling For Massively Multilingual Speech Recognition](https://arxiv.org/abs/2111.00161) by Loren Lugosch, Tatiana Likhomanenko, Gabriel Synnaeve, and Ronan Collobert.
1. **[M2M100](model_doc/m2m_100)** (from Facebook) released with the paper [Beyond English-Centric Multilingual Machine Translation](https://arxiv.org/abs/2010.11125) by Angela Fan, Shruti Bhosale, Holger Schwenk, Zhiyi Ma, Ahmed El-Kishky, Siddharth Goyal, Mandeep Baines, Onur Celebi, Guillaume Wenzek, Vishrav Chaudhary, Naman Goyal, Tom Birch, Vitaliy Liptchinsky, Sergey Edunov, Edouard Grave, Michael Auli, Armand Joulin.
1. **[MarianMT](model_doc/marian)** Machine translation models trained using [OPUS](http://opus.nlpl.eu/) data by Jörg Tiedemann. The [Marian Framework](https://marian-nmt.github.io/) is being developed by the Microsoft Translator Team.
1. **[MarkupLM](model_doc/markuplm)** (from Microsoft Research Asia) released with the paper [MarkupLM: Pre-training of Text and Markup Language for Visually-rich Document Understanding](https://arxiv.org/abs/2110.08518) by Junlong Li, Yiheng Xu, Lei Cui, Furu Wei.
1. **[MaskFormer](model_doc/maskformer)** (from Meta and UIUC) released with the paper [Per-Pixel Classification is Not All You Need for Semantic Segmentation](https://arxiv.org/abs/2107.06278) by Bowen Cheng, Alexander G. Schwing, Alexander Kirillov.
1. **[mBART](model_doc/mbart)** (from Facebook) released with the paper [Multilingual Denoising Pre-training for Neural Machine Translation](https://arxiv.org/abs/2001.08210) by Yinhan Liu, Jiatao Gu, Naman Goyal, Xian Li, Sergey Edunov, Marjan Ghazvininejad, Mike Lewis, Luke Zettlemoyer.
1. **[mBART-50](model_doc/mbart)** (from Facebook) released with the paper [Multilingual Translation with Extensible Multilingual Pretraining and Finetuning](https://arxiv.org/abs/2008.00401) by Yuqing Tang, Chau Tran, Xian Li, Peng-Jen Chen, Naman Goyal, Vishrav Chaudhary, Jiatao Gu, Angela Fan.
......@@ -264,6 +265,7 @@ Flax), PyTorch, and/or TensorFlow.
| M-CTC-T | ❌ | ❌ | ✅ | ❌ | ❌ |
| M2M100 | ✅ | ❌ | ✅ | ❌ | ❌ |
| Marian | ✅ | ❌ | ✅ | ✅ | ✅ |
| MarkupLM | ✅ | ✅ | ✅ | ❌ | ❌ |
| MaskFormer | ❌ | ❌ | ✅ | ❌ | ❌ |
| mBART | ✅ | ✅ | ✅ | ✅ | ✅ |
| Megatron-BERT | ❌ | ❌ | ✅ | ❌ | ❌ |
......
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# MarkupLM
## Overview
The MarkupLM model was proposed in [MarkupLM: Pre-training of Text and Markup Language for Visually-rich Document
Understanding](https://arxiv.org/abs/2110.08518) by Junlong Li, Yiheng Xu, Lei Cui, Furu Wei. MarkupLM is BERT, but
applied to HTML pages instead of raw text documents. The model incorporates additional embedding layers to improve
performance, similar to [LayoutLM](layoutlm).
The model can be used for tasks like question answering on web pages or information extraction from web pages. It obtains
state-of-the-art results on 2 important benchmarks:
- [WebSRC](https://x-lance.github.io/WebSRC/), a dataset for Web-Based Structual Reading Comprehension (a bit like SQuAD but for web pages)
- [SWDE](https://www.researchgate.net/publication/221299838_From_one_tree_to_a_forest_a_unified_solution_for_structured_web_data_extraction), a dataset
for information extraction from web pages (basically named-entity recogntion on web pages)
The abstract from the paper is the following:
*Multimodal pre-training with text, layout, and image has made significant progress for Visually-rich Document
Understanding (VrDU), especially the fixed-layout documents such as scanned document images. While, there are still a
large number of digital documents where the layout information is not fixed and needs to be interactively and
dynamically rendered for visualization, making existing layout-based pre-training approaches not easy to apply. In this
paper, we propose MarkupLM for document understanding tasks with markup languages as the backbone such as
HTML/XML-based documents, where text and markup information is jointly pre-trained. Experiment results show that the
pre-trained MarkupLM significantly outperforms the existing strong baseline models on several document understanding
tasks. The pre-trained model and code will be publicly available.*
Tips:
- In addition to `input_ids`, [`~MarkupLMModel.forward`] expects 2 additional inputs, namely `xpath_tags_seq` and `xpath_subs_seq`.
These are the XPATH tags and subscripts respectively for each token in the input sequence.
- One can use [`MarkupLMProcessor`] to prepare all data for the model. Refer to the [usage guide](#usage-markuplmprocessor) for more info.
- Demo notebooks can be found [here](https://github.com/NielsRogge/Transformers-Tutorials/tree/master/MarkupLM).
<img src="https://huggingface.co/datasets/huggingface/documentation-images/resolve/main/transformers/model_doc/markuplm_architecture.jpg"
alt="drawing" width="600"/>
<small> MarkupLM architecture. Taken from the <a href="https://arxiv.org/abs/2110.08518">original paper.</a> </small>
This model was contributed by [nielsr](https://huggingface.co/nielsr). The original code can be found [here](https://github.com/microsoft/unilm/tree/master/markuplm).
## Usage: MarkupLMProcessor
The easiest way to prepare data for the model is to use [`MarkupLMProcessor`], which internally combines a feature extractor
([`MarkupLMFeatureExtractor`]) and a tokenizer ([`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`]). The feature extractor is
used to extract all nodes and xpaths from the HTML strings, which are then provided to the tokenizer, which turns them into the
token-level inputs of the model (`input_ids` etc.). Note that you can still use the feature extractor and tokenizer separately,
if you only want to handle one of the two tasks.
```python
from transformers import MarkupLMFeatureExtractor, MarkupLMTokenizerFast, MarkupLMProcessor
feature_extractor = MarkupLMFeatureExtractor()
tokenizer = MarkupLMTokenizerFast.from_pretrained("microsoft/markuplm-base")
processor = MarkupLMProcessor(feature_extractor, tokenizer)
```
In short, one can provide HTML strings (and possibly additional data) to [`MarkupLMProcessor`],
and it will create the inputs expected by the model. Internally, the processor first uses
[`MarkupLMFeatureExtractor`] to get a list of nodes and corresponding xpaths. The nodes and
xpaths are then provided to [`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`], which converts them
to token-level `input_ids`, `attention_mask`, `token_type_ids`, `xpath_subs_seq`, `xpath_tags_seq`.
Optionally, one can provide node labels to the processor, which are turned into token-level `labels`.
[`MarkupLMFeatureExtractor`] uses [Beautiful Soup](https://www.crummy.com/software/BeautifulSoup/bs4/doc/), a Python library for
pulling data out of HTML and XML files, under the hood. Note that you can still use your own parsing solution of
choice, and provide the nodes and xpaths yourself to [`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`].
In total, there are 5 use cases that are supported by the processor. Below, we list them all. Note that each of these
use cases work for both batched and non-batched inputs (we illustrate them for non-batched inputs).
**Use case 1: web page classification (training, inference) + token classification (inference), parse_html = True**
This is the simplest case, in which the processor will use the feature extractor to get all nodes and xpaths from the HTML.
```python
>>> from transformers import MarkupLMProcessor
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base")
>>> html_string = """
... <!DOCTYPE html>
... <html>
... <head>
... <title>Hello world</title>
... </head>
... <body>
... <h1>Welcome</h1>
... <p>Here is my website.</p>
... </body>
... </html>"""
>>> # note that you can also add provide all tokenizer parameters here such as padding, truncation
>>> encoding = processor(html_string, return_tensors="pt")
>>> print(encoding.keys())
dict_keys(['input_ids', 'token_type_ids', 'attention_mask', 'xpath_tags_seq', 'xpath_subs_seq'])
```
**Use case 2: web page classification (training, inference) + token classification (inference), parse_html=False**
In case one already has obtained all nodes and xpaths, one doesn't need the feature extractor. In that case, one should
provide the nodes and corresponding xpaths themselves to the processor, and make sure to set `parse_html` to `False`.
```python
>>> from transformers import MarkupLMProcessor
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base")
>>> processor.parse_html = False
>>> nodes = ["hello", "world", "how", "are"]
>>> xpaths = ["/html/body/div/li[1]/div/span", "/html/body/div/li[1]/div/span", "html/body", "html/body/div"]
>>> encoding = processor(nodes=nodes, xpaths=xpaths, return_tensors="pt")
>>> print(encoding.keys())
dict_keys(['input_ids', 'token_type_ids', 'attention_mask', 'xpath_tags_seq', 'xpath_subs_seq'])
```
**Use case 3: token classification (training), parse_html=False**
For token classification tasks (such as [SWDE](https://paperswithcode.com/dataset/swde)), one can also provide the
corresponding node labels in order to train a model. The processor will then convert these into token-level `labels`.
By default, it will only label the first wordpiece of a word, and label the remaining wordpieces with -100, which is the
`ignore_index` of PyTorch's CrossEntropyLoss. In case you want all wordpieces of a word to be labeled, you can
initialize the tokenizer with `only_label_first_subword` set to `False`.
```python
>>> from transformers import MarkupLMProcessor
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base")
>>> processor.parse_html = False
>>> nodes = ["hello", "world", "how", "are"]
>>> xpaths = ["/html/body/div/li[1]/div/span", "/html/body/div/li[1]/div/span", "html/body", "html/body/div"]
>>> node_labels = [1, 2, 2, 1]
>>> encoding = processor(nodes=nodes, xpaths=xpaths, node_labels=node_labels, return_tensors="pt")
>>> print(encoding.keys())
dict_keys(['input_ids', 'token_type_ids', 'attention_mask', 'xpath_tags_seq', 'xpath_subs_seq', 'labels'])
```
**Use case 4: web page question answering (inference), parse_html=True**
For question answering tasks on web pages, you can provide a question to the processor. By default, the
processor will use the feature extractor to get all nodes and xpaths, and create [CLS] question tokens [SEP] word tokens [SEP].
```python
>>> from transformers import MarkupLMProcessor
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base")
>>> html_string = """
... <!DOCTYPE html>
... <html>
... <head>
... <title>Hello world</title>
... </head>
... <body>
... <h1>Welcome</h1>
... <p>My name is Niels.</p>
... </body>
... </html>"""
>>> question = "What's his name?"
>>> encoding = processor(html_string, questions=question, return_tensors="pt")
>>> print(encoding.keys())
dict_keys(['input_ids', 'token_type_ids', 'attention_mask', 'xpath_tags_seq', 'xpath_subs_seq'])
```
**Use case 5: web page question answering (inference), apply_ocr=False**
For question answering tasks (such as WebSRC), you can provide a question to the processor. If you have extracted
all nodes and xpaths yourself, you can provide them directly to the processor. Make sure to set `parse_html` to `False`.
```python
>>> from transformers import MarkupLMProcessor
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base")
>>> processor.parse_html = False
>>> nodes = ["hello", "world", "how", "are"]
>>> xpaths = ["/html/body/div/li[1]/div/span", "/html/body/div/li[1]/div/span", "html/body", "html/body/div"]
>>> question = "What's his name?"
>>> encoding = processor(nodes=nodes, xpaths=xpaths, questions=question, return_tensors="pt")
>>> print(encoding.keys())
dict_keys(['input_ids', 'token_type_ids', 'attention_mask', 'xpath_tags_seq', 'xpath_subs_seq'])
```
## MarkupLMConfig
[[autodoc]] MarkupLMConfig
- all
## MarkupLMFeatureExtractor
[[autodoc]] MarkupLMFeatureExtractor
- __call__
## MarkupLMTokenizer
[[autodoc]] MarkupLMTokenizer
- build_inputs_with_special_tokens
- get_special_tokens_mask
- create_token_type_ids_from_sequences
- save_vocabulary
## MarkupLMTokenizerFast
[[autodoc]] MarkupLMTokenizerFast
- all
## MarkupLMProcessor
[[autodoc]] MarkupLMProcessor
- __call__
## MarkupLMModel
[[autodoc]] MarkupLMModel
- forward
## MarkupLMForSequenceClassification
[[autodoc]] MarkupLMForSequenceClassification
- forward
## MarkupLMForTokenClassification
[[autodoc]] MarkupLMForTokenClassification
- forward
## MarkupLMForQuestionAnswering
[[autodoc]] MarkupLMForQuestionAnswering
- forward
\ No newline at end of file
src/transformers/__init__.py
View file @ f3d2f7a6
......@@ -262,6 +262,13 @@ _import_structure = {
"models.lxmert": ["LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP", "LxmertConfig", "LxmertTokenizer"],
"models.m2m_100": ["M2M_100_PRETRAINED_CONFIG_ARCHIVE_MAP", "M2M100Config"],
"models.marian": ["MarianConfig"],
"models.markuplm": [
"MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP",
"MarkupLMConfig",
"MarkupLMFeatureExtractor",
"MarkupLMProcessor",
"MarkupLMTokenizer",
],
"models.maskformer": ["MASKFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP", "MaskFormerConfig"],
"models.mbart": ["MBartConfig"],
"models.mbart50": [],
......@@ -570,6 +577,7 @@ else:
_import_structure["models.led"].append("LEDTokenizerFast")
_import_structure["models.longformer"].append("LongformerTokenizerFast")
_import_structure["models.lxmert"].append("LxmertTokenizerFast")
_import_structure["models.markuplm"].append("MarkupLMTokenizerFast")
_import_structure["models.mbart"].append("MBartTokenizerFast")
_import_structure["models.mbart50"].append("MBart50TokenizerFast")
_import_structure["models.mobilebert"].append("MobileBertTokenizerFast")
......@@ -1488,6 +1496,16 @@ else:
"MaskFormerPreTrainedModel",
]
)
_import_structure["models.markuplm"].extend(
[
"MARKUPLM_PRETRAINED_MODEL_ARCHIVE_LIST",
"MarkupLMForQuestionAnswering",
"MarkupLMForSequenceClassification",
"MarkupLMForTokenClassification",
"MarkupLMModel",
"MarkupLMPreTrainedModel",
]
)
_import_structure["models.mbart"].extend(
[
"MBartForCausalLM",
......@@ -3192,6 +3210,13 @@ if TYPE_CHECKING:
from .models.lxmert import LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP, LxmertConfig, LxmertTokenizer
from .models.m2m_100 import M2M_100_PRETRAINED_CONFIG_ARCHIVE_MAP, M2M100Config
from .models.marian import MarianConfig
from .models.markuplm import (
MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP,
MarkupLMConfig,
MarkupLMFeatureExtractor,
MarkupLMProcessor,
MarkupLMTokenizer,
)
from .models.maskformer import MASKFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP, MaskFormerConfig
from .models.mbart import MBartConfig
from .models.mctct import MCTCT_PRETRAINED_CONFIG_ARCHIVE_MAP, MCTCTConfig, MCTCTProcessor
......@@ -3465,6 +3490,7 @@ if TYPE_CHECKING:
from .models.led import LEDTokenizerFast
from .models.longformer import LongformerTokenizerFast
from .models.lxmert import LxmertTokenizerFast
from .models.markuplm import MarkupLMTokenizerFast
from .models.mbart import MBartTokenizerFast
from .models.mbart50 import MBart50TokenizerFast
from .models.mobilebert import MobileBertTokenizerFast
......@@ -4196,6 +4222,14 @@ if TYPE_CHECKING:
M2M100PreTrainedModel,
)
from .models.marian import MarianForCausalLM, MarianModel, MarianMTModel
from .models.markuplm import (
MARKUPLM_PRETRAINED_MODEL_ARCHIVE_LIST,
MarkupLMForQuestionAnswering,
MarkupLMForSequenceClassification,
MarkupLMForTokenClassification,
MarkupLMModel,
MarkupLMPreTrainedModel,
)
from .models.maskformer import (
MASKFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
MaskFormerForInstanceSegmentation,
......
src/transformers/convert_slow_tokenizer.py
View file @ f3d2f7a6
......@@ -1043,6 +1043,44 @@ class XGLMConverter(SpmConverter):
)
class MarkupLMConverter(Converter):
def converted(self) -> Tokenizer:
ot = self.original_tokenizer
vocab = ot.encoder
merges = list(ot.bpe_ranks.keys())
tokenizer = Tokenizer(
BPE(
vocab=vocab,
merges=merges,
dropout=None,
continuing_subword_prefix="",
end_of_word_suffix="",
fuse_unk=False,
unk_token=self.original_tokenizer.unk_token,
)
)
tokenizer.pre_tokenizer = pre_tokenizers.ByteLevel(add_prefix_space=ot.add_prefix_space)
tokenizer.decoder = decoders.ByteLevel()
cls = str(self.original_tokenizer.cls_token)
sep = str(self.original_tokenizer.sep_token)
cls_token_id = self.original_tokenizer.cls_token_id
sep_token_id = self.original_tokenizer.sep_token_id
tokenizer.post_processor = processors.TemplateProcessing(
single=f"{cls} $A {sep}",
pair=f"{cls} $A {sep} $B {sep}",
special_tokens=[
(cls, cls_token_id),
(sep, sep_token_id),
],
)
return tokenizer
SLOW_TO_FAST_CONVERTERS = {
"AlbertTokenizer": AlbertConverter,
"BartTokenizer": RobertaConverter,
......@@ -1072,6 +1110,7 @@ SLOW_TO_FAST_CONVERTERS = {
"LongformerTokenizer": RobertaConverter,
"LEDTokenizer": RobertaConverter,
"LxmertTokenizer": BertConverter,
"MarkupLMTokenizer": MarkupLMConverter,
"MBartTokenizer": MBartConverter,
"MBart50Tokenizer": MBart50Converter,
"MPNetTokenizer": MPNetConverter,
......
src/transformers/file_utils.py
View file @ f3d2f7a6
......@@ -79,6 +79,7 @@ from .utils import (
has_file,
http_user_agent,
is_apex_available,
is_bs4_available,
is_coloredlogs_available,
is_datasets_available,
is_detectron2_available,
......
src/transformers/models/__init__.py
View file @ f3d2f7a6
......@@ -88,6 +88,7 @@ from . import (
lxmert,
m2m_100,
marian,
markuplm,
maskformer,
mbart,
mbart50,
......
src/transformers/models/auto/configuration_auto.py
View file @ f3d2f7a6
......@@ -90,6 +90,7 @@ CONFIG_MAPPING_NAMES = OrderedDict(
("lxmert", "LxmertConfig"),
("m2m_100", "M2M100Config"),
("marian", "MarianConfig"),
("markuplm", "MarkupLMConfig"),
("maskformer", "MaskFormerConfig"),
("mbart", "MBartConfig"),
("mctct", "MCTCTConfig"),
......@@ -221,6 +222,7 @@ CONFIG_ARCHIVE_MAP_MAPPING_NAMES = OrderedDict(
("luke", "LUKE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("lxmert", "LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("m2m_100", "M2M_100_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("markuplm", "MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("maskformer", "MASKFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mbart", "MBART_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mctct", "MCTCT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
......@@ -357,6 +359,7 @@ MODEL_NAMES_MAPPING = OrderedDict(
("lxmert", "LXMERT"),
("m2m_100", "M2M100"),
("marian", "Marian"),
("markuplm", "MarkupLM"),
("maskformer", "MaskFormer"),
("mbart", "mBART"),
("mbart50", "mBART-50"),
......
src/transformers/models/auto/modeling_auto.py
View file @ f3d2f7a6
......@@ -89,6 +89,7 @@ MODEL_MAPPING_NAMES = OrderedDict(
("lxmert", "LxmertModel"),
("m2m_100", "M2M100Model"),
("marian", "MarianModel"),
("markuplm", "MarkupLMModel"),
("maskformer", "MaskFormerModel"),
("mbart", "MBartModel"),
("mctct", "MCTCTModel"),
......@@ -247,6 +248,7 @@ MODEL_WITH_LM_HEAD_MAPPING_NAMES = OrderedDict(
("luke", "LukeForMaskedLM"),
("m2m_100", "M2M100ForConditionalGeneration"),
("marian", "MarianMTModel"),
("markuplm", "MarkupLMForMaskedLM"),
("megatron-bert", "MegatronBertForCausalLM"),
("mobilebert", "MobileBertForMaskedLM"),
("mpnet", "MPNetForMaskedLM"),
......@@ -530,6 +532,7 @@ MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
("led", "LEDForSequenceClassification"),
("longformer", "LongformerForSequenceClassification"),
("luke", "LukeForSequenceClassification"),
("markuplm", "MarkupLMForSequenceClassification"),
("mbart", "MBartForSequenceClassification"),
("megatron-bert", "MegatronBertForSequenceClassification"),
("mobilebert", "MobileBertForSequenceClassification"),
......@@ -585,6 +588,7 @@ MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
("longformer", "LongformerForQuestionAnswering"),
("luke", "LukeForQuestionAnswering"),
("lxmert", "LxmertForQuestionAnswering"),
("markuplm", "MarkupLMForQuestionAnswering"),
("mbart", "MBartForQuestionAnswering"),
("megatron-bert", "MegatronBertForQuestionAnswering"),
("mobilebert", "MobileBertForQuestionAnswering"),
......@@ -654,6 +658,7 @@ MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
("layoutlmv3", "LayoutLMv3ForTokenClassification"),
("longformer", "LongformerForTokenClassification"),
("luke", "LukeForTokenClassification"),
("markuplm", "MarkupLMForTokenClassification"),
("megatron-bert", "MegatronBertForTokenClassification"),
("mobilebert", "MobileBertForTokenClassification"),
("mpnet", "MPNetForTokenClassification"),
......
src/transformers/models/auto/processing_auto.py
View file @ f3d2f7a6
......@@ -46,6 +46,7 @@ PROCESSOR_MAPPING_NAMES = OrderedDict(
("layoutlmv2", "LayoutLMv2Processor"),
("layoutlmv3", "LayoutLMv3Processor"),
("layoutxlm", "LayoutXLMProcessor"),
("markuplm", "MarkupLMProcessor"),
("owlvit", "OwlViTProcessor"),
("sew", "Wav2Vec2Processor"),
("sew-d", "Wav2Vec2Processor"),
......
src/transformers/models/markuplm/__init__.py 0 → 100644
View file @ f3d2f7a6
# flake8: noqa
# There's no way to ignore "F401 '...' imported but unused" warnings in this
# module, but to preserve other warnings. So, don't check this module at all.
# Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
# rely on isort to merge the imports
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {
"configuration_markuplm": ["MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP", "MarkupLMConfig"],
"feature_extraction_markuplm": ["MarkupLMFeatureExtractor"],
"processing_markuplm": ["MarkupLMProcessor"],
"tokenization_markuplm": ["MarkupLMTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_markuplm_fast"] = ["MarkupLMTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_markuplm"] = [
"MARKUPLM_PRETRAINED_MODEL_ARCHIVE_LIST",
"MarkupLMForQuestionAnswering",
"MarkupLMForSequenceClassification",
"MarkupLMForTokenClassification",
"MarkupLMModel",
"MarkupLMPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_markuplm import MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP, MarkupLMConfig
from .feature_extraction_markuplm import MarkupLMFeatureExtractor
from .processing_markuplm import MarkupLMProcessor
from .tokenization_markuplm import MarkupLMTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_markuplm_fast import MarkupLMTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_markuplm import (
MARKUPLM_PRETRAINED_MODEL_ARCHIVE_LIST,
MarkupLMForQuestionAnswering,
MarkupLMForSequenceClassification,
MarkupLMForTokenClassification,
MarkupLMModel,
MarkupLMPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure)
src/transformers/models/markuplm/configuration_markuplm.py 0 → 100644
View file @ f3d2f7a6
# coding=utf-8
# Copyright 2021, The Microsoft Research Asia MarkupLM Team authors
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" MarkupLM model configuration"""
from transformers.models.roberta.configuration_roberta import RobertaConfig
from transformers.utils import logging
logger = logging.get_logger(__name__)
MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/markuplm-base": "https://huggingface.co/microsoft/markuplm-base/resolve/main/config.json",
"microsoft/markuplm-large": "https://huggingface.co/microsoft/markuplm-large/resolve/main/config.json",
}
class MarkupLMConfig(RobertaConfig):
r"""
This is the configuration class to store the configuration of a [`MarkupLMModel`]. It is used to instantiate a
MarkupLM model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the MarkupLM
[microsoft/markuplm-base-uncased](https://huggingface.co/microsoft/markuplm-base-uncased) architecture.
Configuration objects inherit from [`BertConfig`] and can be used to control the model outputs. Read the
documentation from [`BertConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the MarkupLM model. Defines the different tokens that can be represented by the
*inputs_ids* passed to the forward method of [`MarkupLMModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed into [`MarkupLMModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
gradient_checkpointing (`bool`, *optional*, defaults to `False`):
If True, use gradient checkpointing to save memory at the expense of slower backward pass.
max_tree_id_unit_embeddings (`int`, *optional*, defaults to 1024):
The maximum value that the tree id unit embedding might ever use. Typically set this to something large
just in case (e.g., 1024).
max_xpath_tag_unit_embeddings (`int`, *optional*, defaults to 256):
The maximum value that the xpath tag unit embedding might ever use. Typically set this to something large
just in case (e.g., 256).
max_xpath_subs_unit_embeddings (`int`, *optional*, defaults to 1024):
The maximum value that the xpath subscript unit embedding might ever use. Typically set this to something
large just in case (e.g., 1024).
tag_pad_id (`int`, *optional*, defaults to 216):
The id of the padding token in the xpath tags.
subs_pad_id (`int`, *optional*, defaults to 1001):
The id of the padding token in the xpath subscripts.
xpath_tag_unit_hidden_size (`int`, *optional*, defaults to 32):
The hidden size of each tree id unit. One complete tree index will have
(50*xpath_tag_unit_hidden_size)-dim.
max_depth (`int`, *optional*, defaults to 50):
The maximum depth in xpath.
Examples:
```python
>>> from transformers import MarkupLMModel, MarkupLMConfig
>>> # Initializing a MarkupLM microsoft/markuplm-base style configuration
>>> configuration = MarkupLMConfig()
>>> # Initializing a model from the microsoft/markuplm-base style configuration
>>> model = MarkupLMModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "markuplm"
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=0,
gradient_checkpointing=False,
max_xpath_tag_unit_embeddings=256,
max_xpath_subs_unit_embeddings=1024,
tag_pad_id=216,
subs_pad_id=1001,
xpath_unit_hidden_size=32,
max_depth=50,
**kwargs
):
super().__init__(
vocab_size=vocab_size,
hidden_size=hidden_size,
num_hidden_layers=num_hidden_layers,
num_attention_heads=num_attention_heads,
intermediate_size=intermediate_size,
hidden_act=hidden_act,
hidden_dropout_prob=hidden_dropout_prob,
attention_probs_dropout_prob=attention_probs_dropout_prob,
max_position_embeddings=max_position_embeddings,
type_vocab_size=type_vocab_size,
initializer_range=initializer_range,
layer_norm_eps=layer_norm_eps,
pad_token_id=pad_token_id,
gradient_checkpointing=gradient_checkpointing,
**kwargs,
)
# additional properties
self.max_depth = max_depth
self.max_xpath_tag_unit_embeddings = max_xpath_tag_unit_embeddings
self.max_xpath_subs_unit_embeddings = max_xpath_subs_unit_embeddings
self.tag_pad_id = tag_pad_id
self.subs_pad_id = subs_pad_id
self.xpath_unit_hidden_size = xpath_unit_hidden_size
src/transformers/models/markuplm/feature_extraction_markuplm.py 0 → 100644
View file @ f3d2f7a6
# coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Feature extractor class for MarkupLM.
"""
import html
from ...feature_extraction_utils import BatchFeature, FeatureExtractionMixin
from ...utils import is_bs4_available, logging, requires_backends
if is_bs4_available():
import bs4
from bs4 import BeautifulSoup
logger = logging.get_logger(__name__)
class MarkupLMFeatureExtractor(FeatureExtractionMixin):
r"""
Constructs a MarkupLM feature extractor. This can be used to get a list of nodes and corresponding xpaths from HTML
strings.
This feature extractor inherits from [`~feature_extraction_utils.PreTrainedFeatureExtractor`] which contains most
of the main methods. Users should refer to this superclass for more information regarding those methods.
"""
def __init__(self, **kwargs):
requires_backends(self, ["bs4"])
super().__init__(**kwargs)
def xpath_soup(self, element):
xpath_tags = []
xpath_subscripts = []
child = element if element.name else element.parent
for parent in child.parents: # type: bs4.element.Tag
siblings = parent.find_all(child.name, recursive=False)
xpath_tags.append(child.name)
xpath_subscripts.append(
0 if 1 == len(siblings) else next(i for i, s in enumerate(siblings, 1) if s is child)
)
child = parent
xpath_tags.reverse()
xpath_subscripts.reverse()
return xpath_tags, xpath_subscripts
def get_three_from_single(self, html_string):
html_code = BeautifulSoup(html_string, "html.parser")
all_doc_strings = []
string2xtag_seq = []
string2xsubs_seq = []
for element in html_code.descendants:
if type(element) == bs4.element.NavigableString:
if type(element.parent) != bs4.element.Tag:
continue
text_in_this_tag = html.unescape(element).strip()
if not text_in_this_tag:
continue
all_doc_strings.append(text_in_this_tag)
xpath_tags, xpath_subscripts = self.xpath_soup(element)
string2xtag_seq.append(xpath_tags)
string2xsubs_seq.append(xpath_subscripts)
if len(all_doc_strings) != len(string2xtag_seq):
raise ValueError("Number of doc strings and xtags does not correspond")
if len(all_doc_strings) != len(string2xsubs_seq):
raise ValueError("Number of doc strings and xsubs does not correspond")
return all_doc_strings, string2xtag_seq, string2xsubs_seq
def construct_xpath(self, xpath_tags, xpath_subscripts):
xpath = ""
for tagname, subs in zip(xpath_tags, xpath_subscripts):
xpath += f"/{tagname}"
if subs != 0:
xpath += f"[{subs}]"
return xpath
def __call__(self, html_strings) -> BatchFeature:
"""
Main method to prepare for the model one or several HTML strings.
Args:
html_strings (`str`, `List[str]`):
The HTML string or batch of HTML strings from which to extract nodes and corresponding xpaths.
Returns:
[`BatchFeature`]: A [`BatchFeature`] with the following fields:
- **nodes** -- Nodes.
- **xpaths** -- Corresponding xpaths.
Examples:
```python
>>> from transformers import MarkupLMFeatureExtractor
>>> page_name_1 = "page1.html"
>>> page_name_2 = "page2.html"
>>> page_name_3 = "page3.html"
>>> with open(page_name_1) as f:
... single_html_string = f.read()
>>> feature_extractor = MarkupLMFeatureExtractor()
>>> # single example
>>> encoding = feature_extractor(single_html_string)
>>> print(encoding.keys())
>>> # dict_keys(['nodes', 'xpaths'])
>>> # batched example
>>> multi_html_strings = []
>>> with open(page_name_2) as f:
... multi_html_strings.append(f.read())
>>> with open(page_name_3) as f:
... multi_html_strings.append(f.read())
>>> encoding = feature_extractor(multi_html_strings)
>>> print(encoding.keys())
>>> # dict_keys(['nodes', 'xpaths'])
```"""
# Input type checking for clearer error
valid_strings = False
# Check that strings has a valid type
if isinstance(html_strings, str):
valid_strings = True
elif isinstance(html_strings, (list, tuple)):
if len(html_strings) == 0 or isinstance(html_strings[0], str):
valid_strings = True
if not valid_strings:
raise ValueError(
"HTML strings must of type `str`, `List[str]` (batch of examples), "
f"but is of type {type(html_strings)}."
)
is_batched = bool(isinstance(html_strings, (list, tuple)) and (isinstance(html_strings[0], str)))
if not is_batched:
html_strings = [html_strings]
# Get nodes + xpaths
nodes = []
xpaths = []
for html_string in html_strings:
all_doc_strings, string2xtag_seq, string2xsubs_seq = self.get_three_from_single(html_string)
nodes.append(all_doc_strings)
xpath_strings = []
for node, tag_list, sub_list in zip(all_doc_strings, string2xtag_seq, string2xsubs_seq):
xpath_string = self.construct_xpath(tag_list, sub_list)
xpath_strings.append(xpath_string)
xpaths.append(xpath_strings)
# return as Dict
data = {"nodes": nodes, "xpaths": xpaths}
encoded_inputs = BatchFeature(data=data, tensor_type=None)
return encoded_inputs
src/transformers/models/markuplm/modeling_markuplm.py 0 → 100755
View file @ f3d2f7a6
# coding=utf-8
# Copyright 2022 Microsoft Research Asia and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch MarkupLM model."""
import math
import os
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from transformers.activations import ACT2FN
from transformers.file_utils import (
add_start_docstrings,
add_start_docstrings_to_model_forward,
replace_return_docstrings,
)
from transformers.modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
MaskedLMOutput,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from transformers.modeling_utils import (
PreTrainedModel,
apply_chunking_to_forward,
find_pruneable_heads_and_indices,
prune_linear_layer,
)
from transformers.utils import logging
from .configuration_markuplm import MarkupLMConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "microsoft/markuplm-base"
_CONFIG_FOR_DOC = "MarkupLMConfig"
_TOKENIZER_FOR_DOC = "MarkupLMTokenizer"
MARKUPLM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/markuplm-base",
"microsoft/markuplm-large",
]
class XPathEmbeddings(nn.Module):
"""Construct the embeddings from xpath tags and subscripts.
We drop tree-id in this version, as its info can be covered by xpath.
"""
def __init__(self, config):
super(XPathEmbeddings, self).__init__()
self.max_depth = config.max_depth
self.xpath_unitseq2_embeddings = nn.Linear(config.xpath_unit_hidden_size * self.max_depth, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.activation = nn.ReLU()
self.xpath_unitseq2_inner = nn.Linear(config.xpath_unit_hidden_size * self.max_depth, 4 * config.hidden_size)
self.inner2emb = nn.Linear(4 * config.hidden_size, config.hidden_size)
self.xpath_tag_sub_embeddings = nn.ModuleList(
[
nn.Embedding(config.max_xpath_tag_unit_embeddings, config.xpath_unit_hidden_size)
for _ in range(self.max_depth)
]
)
self.xpath_subs_sub_embeddings = nn.ModuleList(
[
nn.Embedding(config.max_xpath_subs_unit_embeddings, config.xpath_unit_hidden_size)
for _ in range(self.max_depth)
]
)
def forward(self, xpath_tags_seq=None, xpath_subs_seq=None):
xpath_tags_embeddings = []
xpath_subs_embeddings = []
for i in range(self.max_depth):
xpath_tags_embeddings.append(self.xpath_tag_sub_embeddings[i](xpath_tags_seq[:, :, i]))
xpath_subs_embeddings.append(self.xpath_subs_sub_embeddings[i](xpath_subs_seq[:, :, i]))
xpath_tags_embeddings = torch.cat(xpath_tags_embeddings, dim=-1)
xpath_subs_embeddings = torch.cat(xpath_subs_embeddings, dim=-1)
xpath_embeddings = xpath_tags_embeddings + xpath_subs_embeddings
xpath_embeddings = self.inner2emb(self.dropout(self.activation(self.xpath_unitseq2_inner(xpath_embeddings))))
return xpath_embeddings
# Copied from transformers.models.roberta.modeling_roberta.create_position_ids_from_input_ids
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
class MarkupLMEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super(MarkupLMEmbeddings, self).__init__()
self.config = config
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.max_depth = config.max_depth
self.xpath_embeddings = XPathEmbeddings(config)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)))
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaEmbeddings.create_position_ids_from_inputs_embeds
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
def forward(
self,
input_ids=None,
xpath_tags_seq=None,
xpath_subs_seq=None,
token_type_ids=None,
position_ids=None,
inputs_embeds=None,
past_key_values_length=0,
):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# prepare xpath seq
if xpath_tags_seq is None:
xpath_tags_seq = self.config.tag_pad_id * torch.ones(
tuple(list(input_shape) + [self.max_depth]), dtype=torch.long, device=device
)
if xpath_subs_seq is None:
xpath_subs_seq = self.config.subs_pad_id * torch.ones(
tuple(list(input_shape) + [self.max_depth]), dtype=torch.long, device=device
)
words_embeddings = inputs_embeds
position_embeddings = self.position_embeddings(position_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
xpath_embeddings = self.xpath_embeddings(xpath_tags_seq, xpath_subs_seq)
embeddings = words_embeddings + position_embeddings + token_type_embeddings + xpath_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput with Bert->MarkupLM
class MarkupLMSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertIntermediate
class MarkupLMIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput with Bert->MarkupLM
class MarkupLMOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertPooler
class MarkupLMPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
# Copied from transformers.models.bert.modeling_bert.BertPredictionHeadTransform with Bert->MarkupLM
class MarkupLMPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertLMPredictionHead with Bert->MarkupLM
class MarkupLMLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = MarkupLMPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOnlyMLMHead with Bert->MarkupLM
class MarkupLMOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = MarkupLMLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
# Copied from transformers.models.bert.modeling_bert.BertSelfAttention with Bert->MarkupLM
class MarkupLMSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in MarkupLMModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertAttention with Bert->MarkupLM
class MarkupLMAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = MarkupLMSelfAttention(config, position_embedding_type=position_embedding_type)
self.output = MarkupLMSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertLayer with Bert->MarkupLM
class MarkupLMLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = MarkupLMAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = MarkupLMAttention(config, position_embedding_type="absolute")
self.intermediate = MarkupLMIntermediate(config)
self.output = MarkupLMOutput(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
# Copied from transformers.models.bert.modeling_bert.BertEncoder with Bert->MarkupLM
class MarkupLMEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([MarkupLMLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
class MarkupLMPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MarkupLMConfig
pretrained_model_archive_map = MARKUPLM_PRETRAINED_MODEL_ARCHIVE_LIST
base_model_prefix = "markuplm"
_keys_to_ignore_on_load_missing = [r"position_ids"]
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights with Bert->MarkupLM
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Optional[Union[str, os.PathLike]], *model_args, **kwargs):
return super(MarkupLMPreTrainedModel, cls).from_pretrained(
pretrained_model_name_or_path, *model_args, **kwargs
)
MARKUPLM_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`MarkupLMConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MARKUPLM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`MarkupLMTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
xpath_tags_seq (`torch.LongTensor` of shape `({0}, config.max_depth)`, *optional*):
Tag IDs for each token in the input sequence, padded up to config.max_depth.
xpath_subs_seq (`torch.LongTensor` of shape `({0}, config.max_depth)`, *optional*):
Subscript IDs for each token in the input sequence, padded up to config.max_depth.
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`: `1` for
tokens that are NOT MASKED, `0` for MASKED tokens.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`: `0` corresponds to a *sentence A* token, `1` corresponds to a *sentence B* token
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`: `1`
indicates the head is **not masked**, `0` indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert *input_ids* indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
If set to `True`, the attentions tensors of all attention layers are returned. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
If set to `True`, the hidden states of all layers are returned. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
If set to `True`, the model will return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare MarkupLM Model transformer outputting raw hidden-states without any specific head on top.",
MARKUPLM_START_DOCSTRING,
)
class MarkupLMModel(MarkupLMPreTrainedModel):
# Copied from transformers.models.bert.modeling_bert.BertModel.__init__ with Bert->MarkupLM
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = MarkupLMEmbeddings(config)
self.encoder = MarkupLMEncoder(config)
self.pooler = MarkupLMPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BaseModelOutputWithPoolingAndCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids=None,
xpath_tags_seq=None,
xpath_subs_seq=None,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Returns:
Examples:
```python
>>> from transformers import MarkupLMProcessor, MarkupLMModel
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base")
>>> model = MarkupLMModel.from_pretrained("microsoft/markuplm-base")
>>> html_string = "<html> <head> <title>Page Title</title> </head> </html>"
>>> encoding = processor(html_string, return_tensors="pt")
>>> outputs = model(**encoding)
>>> last_hidden_states = outputs.last_hidden_state
>>> list(last_hidden_states.shape)
[1, 4, 768]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
extended_attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
extended_attention_mask = extended_attention_mask.to(dtype=self.dtype)
extended_attention_mask = (1.0 - extended_attention_mask) * -10000.0
if head_mask is not None:
if head_mask.dim() == 1:
head_mask = head_mask.unsqueeze(0).unsqueeze(0).unsqueeze(-1).unsqueeze(-1)
head_mask = head_mask.expand(self.config.num_hidden_layers, -1, -1, -1, -1)
elif head_mask.dim() == 2:
head_mask = head_mask.unsqueeze(1).unsqueeze(-1).unsqueeze(-1)
head_mask = head_mask.to(dtype=next(self.parameters()).dtype)
else:
head_mask = [None] * self.config.num_hidden_layers
embedding_output = self.embeddings(
input_ids=input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
)
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertModel.prepare_inputs_for_generation
def prepare_inputs_for_generation(self, input_ids, past=None, attention_mask=None, **model_kwargs):
input_shape = input_ids.shape
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_shape)
# cut decoder_input_ids if past is used
if past is not None:
input_ids = input_ids[:, -1:]
return {"input_ids": input_ids, "attention_mask": attention_mask, "past_key_values": past}
# Copied from transformers.models.bert.modeling_bert.BertModel._reorder_cache
def _reorder_cache(self, past, beam_idx):
reordered_past = ()
for layer_past in past:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
@add_start_docstrings(
"""
MarkupLM Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MARKUPLM_START_DOCSTRING,
)
class MarkupLMForQuestionAnswering(MarkupLMPreTrainedModel):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
# Copied from transformers.models.bert.modeling_bert.BertForQuestionAnswering.__init__ with bert->markuplm, Bert->MarkupLM
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.markuplm = MarkupLMModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=QuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids=None,
xpath_tags_seq=None,
xpath_subs_seq=None,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
start_positions=None,
end_positions=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
Examples:
```python
>>> from transformers import MarkupLMProcessor, MarkupLMForQuestionAnswering
>>> import torch
>>> processor = MarkupLMProcessor.from_pretrained("microsoft/markuplm-base-finetuned-websrc")
>>> model = MarkupLMForQuestionAnswering.from_pretrained("microsoft/markuplm-base-finetuned-websrc")
>>> html_string = "<html> <head> <title>My name is Niels</title> </head> </html>"
>>> question = "What's his name?"
>>> encoding = processor(html_string, questions=question, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**encoding)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_tokens = encoding.input_ids[0, answer_start_index : answer_end_index + 1]
>>> processor.decode(predict_answer_tokens).strip()
'Niels'
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.markuplm(
input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions.clamp_(0, ignored_index)
end_positions.clamp_(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""MarkupLM Model with a `token_classification` head on top.""", MARKUPLM_START_DOCSTRING)
class MarkupLMForTokenClassification(MarkupLMPreTrainedModel):
# Copied from transformers.models.bert.modeling_bert.BertForTokenClassification.__init__ with bert->markuplm, Bert->MarkupLM
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.markuplm = MarkupLMModel(config, add_pooling_layer=False)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids=None,
xpath_tags_seq=None,
xpath_subs_seq=None,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
labels=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, AutoModelForTokenClassification
>>> import torch
>>> processor = AutoProcessor.from_pretrained("microsoft/markuplm-base")
>>> processor.parse_html = False
>>> model = AutoModelForTokenClassification.from_pretrained("microsoft/markuplm-base", num_labels=7)
>>> nodes = ["hello", "world"]
>>> xpaths = ["/html/body/div/li[1]/div/span", "/html/body/div/li[1]/div/span"]
>>> node_labels = [1, 2]
>>> encoding = processor(nodes=nodes, xpaths=xpaths, node_labels=node_labels, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**encoding)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.markuplm(
input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.classifier(sequence_output) # (batch_size, seq_length, node_type_size)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(
prediction_scores.view(-1, self.config.num_labels),
labels.view(-1),
)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MarkupLM Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
MARKUPLM_START_DOCSTRING,
)
class MarkupLMForSequenceClassification(MarkupLMPreTrainedModel):
# Copied from transformers.models.bert.modeling_bert.BertForSequenceClassification.__init__ with bert->markuplm, Bert->MarkupLM
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.markuplm = MarkupLMModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MARKUPLM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids=None,
xpath_tags_seq=None,
xpath_subs_seq=None,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
labels=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, AutoModelForSequenceClassification
>>> import torch
>>> processor = AutoProcessor.from_pretrained("microsoft/markuplm-base")
>>> model = AutoModelForSequenceClassification.from_pretrained("microsoft/markuplm-base", num_labels=7)
>>> html_string = "<html> <head> <title>Page Title</title> </head> </html>"
>>> encoding = processor(html_string, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**encoding)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.markuplm(
input_ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
src/transformers/models/markuplm/processing_markuplm.py 0 → 100644
View file @ f3d2f7a6
# coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Processor class for MarkupLM.
"""
from typing import Optional, Union
from ...file_utils import TensorType
from ...processing_utils import ProcessorMixin
from ...tokenization_utils_base import BatchEncoding, PaddingStrategy, TruncationStrategy
class MarkupLMProcessor(ProcessorMixin):
r"""
Constructs a MarkupLM processor which combines a MarkupLM feature extractor and a MarkupLM tokenizer into a single
processor.
[`MarkupLMProcessor`] offers all the functionalities you need to prepare data for the model.
It first uses [`MarkupLMFeatureExtractor`] to extract nodes and corresponding xpaths from one or more HTML strings.
Next, these are provided to [`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`], which turns them into token-level
`input_ids`, `attention_mask`, `token_type_ids`, `xpath_tags_seq` and `xpath_subs_seq`.
Args:
feature_extractor (`MarkupLMFeatureExtractor`):
An instance of [`MarkupLMFeatureExtractor`]. The feature extractor is a required input.
tokenizer (`MarkupLMTokenizer` or `MarkupLMTokenizerFast`):
An instance of [`MarkupLMTokenizer`] or [`MarkupLMTokenizerFast`]. The tokenizer is a required input.
parse_html (`bool`, *optional*, defaults to `True`):
Whether or not to use `MarkupLMFeatureExtractor` to parse HTML strings into nodes and corresponding xpaths.
"""
feature_extractor_class = "MarkupLMFeatureExtractor"
tokenizer_class = ("MarkupLMTokenizer", "MarkupLMTokenizerFast")
parse_html = True
def __call__(
self,
html_strings=None,
nodes=None,
xpaths=None,
node_labels=None,
questions=None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs
) -> BatchEncoding:
"""
This method first forwards the `html_strings` argument to [`~MarkupLMFeatureExtractor.__call__`]. Next, it
passes the `nodes` and `xpaths` along with the additional arguments to [`~MarkupLMTokenizer.__call__`] and
returns the output.
Optionally, one can also provide a `text` argument which is passed along as first sequence.
Please refer to the docstring of the above two methods for more information.
"""
# first, create nodes and xpaths
if self.parse_html:
if html_strings is None:
raise ValueError("Make sure to pass HTML strings in case `parse_html` is set to `True`")
if nodes is not None or xpaths is not None or node_labels is not None:
raise ValueError(
"Please don't pass nodes, xpaths nor node labels in case `parse_html` is set to `True`"
)
features = self.feature_extractor(html_strings)
nodes = features["nodes"]
xpaths = features["xpaths"]
else:
if html_strings is not None:
raise ValueError("You have passed HTML strings but `parse_html` is set to `False`.")
if nodes is None or xpaths is None:
raise ValueError("Make sure to pass nodes and xpaths in case `parse_html` is set to `False`")
# # second, apply the tokenizer
if questions is not None and self.parse_html:
if isinstance(questions, str):
questions = [questions] # add batch dimension (as the feature extractor always adds a batch dimension)
encoded_inputs = self.tokenizer(
text=questions if questions is not None else nodes,
text_pair=nodes if questions is not None else None,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
return_tensors=return_tensors,
**kwargs,
)
return encoded_inputs
def batch_decode(self, *args, **kwargs):
"""
This method forwards all its arguments to TrOCRTokenizer's [`~PreTrainedTokenizer.batch_decode`]. Please refer
to the docstring of this method for more information.
"""
return self.tokenizer.batch_decode(*args, **kwargs)
def decode(self, *args, **kwargs):
"""
This method forwards all its arguments to TrOCRTokenizer's [`~PreTrainedTokenizer.decode`]. Please refer to the
docstring of this method for more information.
"""
return self.tokenizer.decode(*args, **kwargs)
src/transformers/models/markuplm/tokenization_markuplm.py 0 → 100644
View file @ f3d2f7a6
# coding=utf-8
# Copyright Microsoft Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization class for MarkupLM."""
import json
import os
from functools import lru_cache
from typing import Dict, List, Optional, Tuple, Union
import regex as re
from ...file_utils import PaddingStrategy, TensorType, add_end_docstrings
from ...tokenization_utils import AddedToken, PreTrainedTokenizer
from ...tokenization_utils_base import (
ENCODE_KWARGS_DOCSTRING,
BatchEncoding,
EncodedInput,
PreTokenizedInput,
TextInput,
TextInputPair,
TruncationStrategy,
)
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.json", "merges_file": "merges.txt", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"microsoft/markuplm-base": "https://huggingface.co/microsoft/markuplm-base/resolve/main/vocab.json",
"microsoft/markuplm-large": "https://huggingface.co/microsoft/markuplm-large/resolve/main/vocab.json",
},
"merges_file": {
"microsoft/markuplm-base": "https://huggingface.co/microsoft/markuplm-base/resolve/main/merges.txt",
"microsoft/markuplm-large": "https://huggingface.co/microsoft/markuplm-large/resolve/main/merges.txt",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"microsoft/markuplm-base": 512,
"microsoft/markuplm-large": 512,
}
MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING = r"""
add_special_tokens (`bool`, *optional*, defaults to `True`):
Whether or not to encode the sequences with the special tokens relative to their model.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `False`):
Activates and controls padding. Accepts the following values:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
truncation (`bool`, `str` or [`~tokenization_utils_base.TruncationStrategy`], *optional*, defaults to `False`):
Activates and controls truncation. Accepts the following values:
- `True` or `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or
to the maximum acceptable input length for the model if that argument is not provided. This will
truncate token by token, removing a token from the longest sequence in the pair if a pair of
sequences (or a batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `False` or `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths
greater than the model maximum admissible input size).
max_length (`int`, *optional*):
Controls the maximum length to use by one of the truncation/padding parameters. If left unset or set to
`None`, this will use the predefined model maximum length if a maximum length is required by one of the
truncation/padding parameters. If the model has no specific maximum input length (like XLNet)
truncation/padding to a maximum length will be deactivated.
stride (`int`, *optional*, defaults to 0):
If set to a number along with `max_length`, the overflowing tokens returned when
`return_overflowing_tokens=True` will contain some tokens from the end of the truncated sequence
returned to provide some overlap between truncated and overflowing sequences. The value of this
argument defines the number of overlapping tokens.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value. This is especially useful to enable
the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
"""
@lru_cache()
def bytes_to_unicode():
"""
Returns list of utf-8 byte and a mapping to unicode strings. We specifically avoids mapping to whitespace/control
characters the bpe code barfs on. The reversible bpe codes work on unicode strings. This means you need a large #
of unicode characters in your vocab if you want to avoid UNKs. When you're at something like a 10B token dataset
you end up needing around 5K for decent coverage. This is a significant percentage of your normal, say, 32K bpe
vocab. To avoid that, we want lookup tables between utf-8 bytes and unicode strings.
"""
bs = (
list(range(ord("!"), ord("~") + 1)) + list(range(ord("¡"), ord("¬") + 1)) + list(range(ord("®"), ord("ÿ") + 1))
)
cs = bs[:]
n = 0
for b in range(2**8):
if b not in bs:
bs.append(b)
cs.append(2**8 + n)
n += 1
cs = [chr(n) for n in cs]
return dict(zip(bs, cs))
def get_pairs(word):
"""
Return set of symbol pairs in a word. Word is represented as tuple of symbols (symbols being variable-length
strings).
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
return pairs
class MarkupLMTokenizer(PreTrainedTokenizer):
r"""
Construct a MarkupLM tokenizer. Based on byte-level Byte-Pair-Encoding (BPE). [`MarkupLMTokenizer`] can be used to
turn HTML strings into to token-level `input_ids`, `attention_mask`, `token_type_ids`, `xpath_tags_seq` and
`xpath_tags_seq`. This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods.
Users should refer to this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
errors (`str`, *optional*, defaults to `"replace"`):
Paradigm to follow when decoding bytes to UTF-8. See
[bytes.decode](https://docs.python.org/3/library/stdtypes.html#bytes.decode) for more information.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
add_prefix_space (`bool`, *optional*, defaults to `False`):
Whether or not to add an initial space to the input. This allows to treat the leading word just as any
other word. (RoBERTa tokenizer detect beginning of words by the preceding space).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
merges_file,
tags_dict,
errors="replace",
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
add_prefix_space=False,
max_depth=50,
max_width=1000,
pad_width=1001,
pad_token_label=-100,
only_label_first_subword=True,
**kwargs
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
super().__init__(
vocab_file=vocab_file,
merges_file=merges_file,
tags_dict=tags_dict,
errors=errors,
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
add_prefix_space=add_prefix_space,
max_depth=max_depth,
max_width=max_width,
pad_width=pad_width,
pad_token_label=pad_token_label,
only_label_first_subword=only_label_first_subword,
**kwargs,
)
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.tags_dict = tags_dict
self.decoder = {v: k for k, v in self.encoder.items()}
self.errors = errors # how to handle errors in decoding
self.byte_encoder = bytes_to_unicode()
self.byte_decoder = {v: k for k, v in self.byte_encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
bpe_merges = merges_handle.read().split("\n")[1:-1]
bpe_merges = [tuple(merge.split()) for merge in bpe_merges]
self.bpe_ranks = dict(zip(bpe_merges, range(len(bpe_merges))))
self.cache = {}
self.add_prefix_space = add_prefix_space
# Should have added re.IGNORECASE so BPE merges can happen for capitalized versions of contractions
self.pat = re.compile(r"""'s|'t|'re|'ve|'m|'ll|'d| ?\p{L}+| ?\p{N}+| ?[^\s\p{L}\p{N}]+|\s+(?!\S)|\s+""")
# additional properties
self.max_depth = max_depth
self.max_width = max_width
self.pad_width = pad_width
self.unk_tag_id = len(self.tags_dict)
self.pad_tag_id = self.unk_tag_id + 1
self.pad_xpath_tags_seq = [self.pad_tag_id] * self.max_depth
self.pad_xpath_subs_seq = [self.pad_width] * self.max_depth
self.pad_token_label = pad_token_label
self.only_label_first_subword = only_label_first_subword
def get_xpath_seq(self, xpath):
"""
Given the xpath expression of one particular node (like "/html/body/div/li[1]/div/span[2]"), return a list of
tag IDs and corresponding subscripts, taking into account max depth.
"""
xpath_tags_list = []
xpath_subs_list = []
xpath_units = xpath.split("/")
for unit in xpath_units:
if not unit.strip():
continue
name_subs = unit.strip().split("[")
tag_name = name_subs[0]
sub = 0 if len(name_subs) == 1 else int(name_subs[1][:-1])
xpath_tags_list.append(self.tags_dict.get(tag_name, self.unk_tag_id))
xpath_subs_list.append(min(self.max_width, sub))
xpath_tags_list = xpath_tags_list[: self.max_depth]
xpath_subs_list = xpath_tags_list[: self.max_depth]
xpath_tags_list += [self.pad_tag_id] * (self.max_depth - len(xpath_tags_list))
xpath_subs_list += [self.pad_width] * (self.max_depth - len(xpath_subs_list))
return xpath_tags_list, xpath_subs_list
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token)
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
bpe_tokens = []
for token in re.findall(self.pat, text):
token = "".join(
self.byte_encoder[b] for b in token.encode("utf-8")
) # Maps all our bytes to unicode strings, avoiding control tokens of the BPE (spaces in our case)
bpe_tokens.extend(bpe_token for bpe_token in self.bpe(token).split(" "))
return bpe_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
logger.warning(
"MarkupLM now does not support generative tasks, decoding is experimental and subject to change."
)
text = "".join(tokens)
text = bytearray([self.byte_decoder[c] for c in text]).decode("utf-8", errors=self.errors)
return text
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
# save vocab_file
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
# save merge_file
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
writer.write("#version: 0.2\n")
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merge_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
def prepare_for_tokenization(self, text, is_split_into_words=False, **kwargs):
add_prefix_space = kwargs.pop("add_prefix_space", self.add_prefix_space)
if (is_split_into_words or add_prefix_space) and (len(text) > 0 and not text[0].isspace()):
text = " " + text
return (text, kwargs)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A RoBERTa sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def build_xpath_tags_with_special_tokens(
self, xpath_tags_0: List[int], xpath_tags_1: Optional[List[int]] = None
) -> List[int]:
pad = [self.pad_xpath_tags_seq]
if len(xpath_tags_1) == 0:
return pad + xpath_tags_0 + pad
return pad + xpath_tags_0 + pad + xpath_tags_1 + pad
def build_xpath_subs_with_special_tokens(
self, xpath_subs_0: List[int], xpath_subs_1: Optional[List[int]] = None
) -> List[int]:
pad = [self.pad_xpath_subs_seq]
if len(xpath_subs_1) == 0:
return pad + xpath_subs_0 + pad
return pad + xpath_subs_0 + pad + xpath_subs_1 + pad
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Args:
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1, 1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. RoBERTa does not
make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + token_ids_1 + sep) * [0]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
text: Union[TextInput, PreTokenizedInput, List[TextInput], List[PreTokenizedInput]],
text_pair: Optional[Union[PreTokenizedInput, List[PreTokenizedInput]]] = None,
xpaths: Union[List[List[int]], List[List[List[int]]]] = None,
node_labels: Optional[Union[List[int], List[List[int]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) or one or several pair(s) of
sequences with node-level xpaths and optional labels.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string, a list of strings
(nodes of a single example or questions of a batch of examples) or a list of list of strings (batch of
nodes).
text_pair (`List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence should be a list of strings
(pretokenized string).
xpaths (`List[List[int]]`, `List[List[List[int]]]`):
Node-level xpaths.
node_labels (`List[int]`, `List[List[int]]`, *optional*):
Node-level integer labels (for token classification tasks).
"""
# Input type checking for clearer error
def _is_valid_text_input(t):
if isinstance(t, str):
# Strings are fine
return True
elif isinstance(t, (list, tuple)):
# List are fine as long as they are...
if len(t) == 0:
# ... empty
return True
elif isinstance(t[0], str):
# ... list of strings
return True
elif isinstance(t[0], (list, tuple)):
# ... list with an empty list or with a list of strings
return len(t[0]) == 0 or isinstance(t[0][0], str)
else:
return False
else:
return False
if text_pair is not None:
# in case text + text_pair are provided, text = questions, text_pair = nodes
if not _is_valid_text_input(text):
raise ValueError("text input must of type `str` (single example) or `List[str]` (batch of examples). ")
if not isinstance(text_pair, (list, tuple)):
raise ValueError(
"Nodes must be of type `List[str]` (single pretokenized example), "
"or `List[List[str]]` (batch of pretokenized examples)."
)
else:
# in case only text is provided => must be nodes
if not isinstance(text, (list, tuple)):
raise ValueError(
"Nodes must be of type `List[str]` (single pretokenized example), "
"or `List[List[str]]` (batch of pretokenized examples)."
)
if text_pair is not None:
is_batched = isinstance(text, (list, tuple))
else:
is_batched = isinstance(text, (list, tuple)) and text and isinstance(text[0], (list, tuple))
nodes = text if text_pair is None else text_pair
assert xpaths is not None, "You must provide corresponding xpaths"
if is_batched:
assert len(nodes) == len(xpaths), "You must provide nodes and xpaths for an equal amount of examples"
for nodes_example, xpaths_example in zip(nodes, xpaths):
assert len(nodes_example) == len(xpaths_example), "You must provide as many nodes as there are xpaths"
else:
assert len(nodes) == len(xpaths), "You must provide as many nodes as there are xpaths"
if is_batched:
if text_pair is not None and len(text) != len(text_pair):
raise ValueError(
f"batch length of `text`: {len(text)} does not match batch length of `text_pair`:"
f" {len(text_pair)}."
)
batch_text_or_text_pairs = list(zip(text, text_pair)) if text_pair is not None else text
is_pair = bool(text_pair is not None)
return self.batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
],
is_pair: bool = None,
xpaths: Optional[List[List[List[int]]]] = None,
node_labels: Optional[Union[List[int], List[List[int]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
],
is_pair: bool = None,
xpaths: Optional[List[List[List[int]]]] = None,
node_labels: Optional[List[List[int]]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
batch_outputs = self._batch_prepare_for_model(
batch_text_or_text_pairs=batch_text_or_text_pairs,
is_pair=is_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=return_tensors,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def _batch_prepare_for_model(
self,
batch_text_or_text_pairs,
is_pair: bool = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[List[int]]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[str] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_length: bool = False,
verbose: bool = True,
) -> BatchEncoding:
"""
Prepares a sequence of input id, or a pair of sequences of inputs ids so that it can be used by the model. It
adds special tokens, truncates sequences if overflowing while taking into account the special tokens and
manages a moving window (with user defined stride) for overflowing tokens.
Args:
batch_ids_pairs: list of tokenized input ids or input ids pairs
"""
batch_outputs = {}
for idx, example in enumerate(zip(batch_text_or_text_pairs, xpaths)):
batch_text_or_text_pair, xpaths_example = example
outputs = self.prepare_for_model(
batch_text_or_text_pair[0] if is_pair else batch_text_or_text_pair,
batch_text_or_text_pair[1] if is_pair else None,
xpaths_example,
node_labels=node_labels[idx] if node_labels is not None else None,
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterward
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=None, # we pad in batch afterward
return_attention_mask=False, # we pad in batch afterward
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding_strategy.value,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING)
def encode(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> List[int]:
encoded_inputs = self.encode_plus(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
return encoded_inputs["input_ids"]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
"""
Tokenize and prepare for the model a sequence or a pair of sequences. .. warning:: This method is deprecated,
`__call__` should be used instead.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The first sequence to be encoded. This can be a string, a list of strings or a list of list of strings.
text_pair (`List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a list of strings (nodes of a single example) or a
list of list of strings (nodes of a batch of examples).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._encode_plus(
text=text,
xpaths=xpaths,
text_pair=text_pair,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _encode_plus(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast. "
"More information on available tokenizers at "
"https://github.com/huggingface/transformers/pull/2674"
)
return self.prepare_for_model(
text=text,
text_pair=text_pair,
xpaths=xpaths,
node_labels=node_labels,
add_special_tokens=add_special_tokens,
padding=padding_strategy.value,
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, MARKUPLM_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def prepare_for_model(
self,
text: Union[TextInput, PreTokenizedInput],
text_pair: Optional[PreTokenizedInput] = None,
xpaths: Optional[List[List[int]]] = None,
node_labels: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs
) -> BatchEncoding:
"""
Prepares a sequence or a pair of sequences so that it can be used by the model. It adds special tokens,
truncates sequences if overflowing while taking into account the special tokens and manages a moving window
(with user defined stride) for overflowing tokens. Please Note, for *text_pair* different than `None` and
*truncation_strategy = longest_first* or `True`, it is not possible to return overflowing tokens. Such a
combination of arguments will raise an error.
Node-level `xpaths` are turned into token-level `xpath_tags_seq` and `xpath_subs_seq`. If provided, node-level
`node_labels` are turned into token-level `labels`. The node label is used for the first token of the node,
while remaining tokens are labeled with -100, such that they will be ignored by the loss function.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The first sequence to be encoded. This can be a string, a list of strings or a list of list of strings.
text_pair (`List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a list of strings (nodes of a single example) or a
list of list of strings (nodes of a batch of examples).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
tokens = []
pair_tokens = []
xpath_tags_seq = []
xpath_subs_seq = []
pair_xpath_tags_seq = []
pair_xpath_subs_seq = []
labels = []
if text_pair is None:
if node_labels is None:
# CASE 1: web page classification (training + inference) + CASE 2: token classification (inference)
for word, xpath in zip(text, xpaths):
if len(word) < 1: # skip empty nodes
continue
word_tokens = self.tokenize(word)
tokens.extend(word_tokens)
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpath)
xpath_tags_seq.extend([xpath_tags_list] * len(word_tokens))
xpath_subs_seq.extend([xpath_subs_list] * len(word_tokens))
else:
# CASE 2: token classification (training)
for word, xpath, label in zip(text, xpaths, node_labels):
if len(word) < 1: # skip empty nodes
continue
word_tokens = self.tokenize(word)
tokens.extend(word_tokens)
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpath)
xpath_tags_seq.extend([xpath_tags_list] * len(word_tokens))
xpath_subs_seq.extend([xpath_subs_list] * len(word_tokens))
if self.only_label_first_subword:
# Use the real label id for the first token of the word, and padding ids for the remaining tokens
labels.extend([label] + [self.pad_token_label] * (len(word_tokens) - 1))
else:
labels.extend([label] * len(word_tokens))
else:
# CASE 3: web page question answering (inference)
# text = question
# text_pair = nodes
tokens = self.tokenize(text)
xpath_tags_seq = [self.pad_xpath_tags_seq for _ in range(len(tokens))]
xpath_subs_seq = [self.pad_xpath_subs_seq for _ in range(len(tokens))]
for word, xpath in zip(text_pair, xpaths):
if len(word) < 1: # skip empty nodes
continue
word_tokens = self.tokenize(word)
pair_tokens.extend(word_tokens)
xpath_tags_list, xpath_subs_list = self.get_xpath_seq(xpath)
pair_xpath_tags_seq.extend([xpath_tags_list] * len(word_tokens))
pair_xpath_subs_seq.extend([xpath_subs_list] * len(word_tokens))
# Create ids + pair_ids
ids = self.convert_tokens_to_ids(tokens)
pair_ids = self.convert_tokens_to_ids(pair_tokens) if pair_tokens else None
if (
return_overflowing_tokens
and truncation_strategy == TruncationStrategy.LONGEST_FIRST
and pair_ids is not None
):
raise ValueError(
"Not possible to return overflowing tokens for pair of sequences with the "
"`longest_first`. Please select another truncation strategy than `longest_first`, "
"for instance `only_second` or `only_first`."
)
# Compute the total size of the returned encodings
pair = bool(pair_ids is not None)
len_ids = len(ids)
len_pair_ids = len(pair_ids) if pair else 0
total_len = len_ids + len_pair_ids + (self.num_special_tokens_to_add(pair=pair) if add_special_tokens else 0)
# Truncation: Handle max sequence length
overflowing_tokens = []
overflowing_xpath_tags_seq = []
overflowing_xpath_subs_seq = []
overflowing_labels = []
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and max_length and total_len > max_length:
(
ids,
xpath_tags_seq,
xpath_subs_seq,
pair_ids,
pair_xpath_tags_seq,
pair_xpath_subs_seq,
labels,
overflowing_tokens,
overflowing_xpath_tags_seq,
overflowing_xpath_subs_seq,
overflowing_labels,
) = self.truncate_sequences(
ids,
xpath_tags_seq=xpath_tags_seq,
xpath_subs_seq=xpath_subs_seq,
pair_ids=pair_ids,
pair_xpath_tags_seq=pair_xpath_tags_seq,
pair_xpath_subs_seq=pair_xpath_subs_seq,
labels=labels,
num_tokens_to_remove=total_len - max_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
if return_token_type_ids and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
encoded_inputs = {}
if return_overflowing_tokens:
encoded_inputs["overflowing_tokens"] = overflowing_tokens
encoded_inputs["overflowing_xpath_tags_seq"] = overflowing_xpath_tags_seq
encoded_inputs["overflowing_xpath_subs_seq"] = overflowing_xpath_subs_seq
encoded_inputs["overflowing_labels"] = overflowing_labels
encoded_inputs["num_truncated_tokens"] = total_len - max_length
# Add special tokens
if add_special_tokens:
sequence = self.build_inputs_with_special_tokens(ids, pair_ids)
token_type_ids = self.create_token_type_ids_from_sequences(ids, pair_ids)
xpath_tags_ids = self.build_xpath_tags_with_special_tokens(xpath_tags_seq, pair_xpath_tags_seq)
xpath_subs_ids = self.build_xpath_subs_with_special_tokens(xpath_subs_seq, pair_xpath_subs_seq)
if labels:
labels = [self.pad_token_label] + labels + [self.pad_token_label]
else:
sequence = ids + pair_ids if pair else ids
token_type_ids = [0] * len(ids) + ([0] * len(pair_ids) if pair else [])
xpath_tags_ids = xpath_tags_seq + pair_xpath_tags_seq if pair else xpath_tags_seq
xpath_subs_ids = xpath_subs_seq + pair_xpath_subs_seq if pair else xpath_subs_seq
# Build output dictionary
encoded_inputs["input_ids"] = sequence
encoded_inputs["xpath_tags_seq"] = xpath_tags_ids
encoded_inputs["xpath_subs_seq"] = xpath_subs_ids
if return_token_type_ids:
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(ids, pair_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(sequence)
if labels:
encoded_inputs["labels"] = labels
# Check lengths
self._eventual_warn_about_too_long_sequence(encoded_inputs["input_ids"], max_length, verbose)
# Padding
if padding_strategy != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
padding=padding_strategy.value,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
def truncate_sequences(
self,
ids: List[int],
xpath_tags_seq: List[List[int]],
xpath_subs_seq: List[List[int]],
pair_ids: Optional[List[int]] = None,
pair_xpath_tags_seq: Optional[List[List[int]]] = None,
pair_xpath_subs_seq: Optional[List[List[int]]] = None,
labels: Optional[List[int]] = None,
num_tokens_to_remove: int = 0,
truncation_strategy: Union[str, TruncationStrategy] = "longest_first",
stride: int = 0,
) -> Tuple[List[int], List[int], List[int]]:
"""
Args:
Truncates a sequence pair in-place following the strategy.
ids (`List[int]`):
Tokenized input ids of the first sequence. Can be obtained from a string by chaining the `tokenize` and
`convert_tokens_to_ids` methods.
xpath_tags_seq (`List[List[int]]`):
XPath tag IDs of the first sequence.
xpath_subs_seq (`List[List[int]]`):
XPath sub IDs of the first sequence.
pair_ids (`List[int]`, *optional*):
Tokenized input ids of the second sequence. Can be obtained from a string by chaining the `tokenize`
and `convert_tokens_to_ids` methods.
pair_xpath_tags_seq (`List[List[int]]`, *optional*):
XPath tag IDs of the second sequence.
pair_xpath_subs_seq (`List[List[int]]`, *optional*):
XPath sub IDs of the second sequence.
num_tokens_to_remove (`int`, *optional*, defaults to 0):
Number of tokens to remove using the truncation strategy.
truncation_strategy (`str` or [`~tokenization_utils_base.TruncationStrategy`], *optional*, defaults to
`False`):
The strategy to follow for truncation. Can be:
- `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will truncate
token by token, removing a token from the longest sequence in the pair if a pair of sequences (or a
batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths greater
than the model maximum admissible input size).
stride (`int`, *optional*, defaults to 0):
If set to a positive number, the overflowing tokens returned will contain some tokens from the main
sequence returned. The value of this argument defines the number of additional tokens.
Returns:
`Tuple[List[int], List[int], List[int]]`: The truncated `ids`, the truncated `pair_ids` and the list of
overflowing tokens. Note: The *longest_first* strategy returns empty list of overflowing tokens if a pair
of sequences (or a batch of pairs) is provided.
"""
if num_tokens_to_remove <= 0:
return ids, xpath_tags_seq, xpath_subs_seq, pair_ids, pair_xpath_tags_seq, pair_xpath_subs_seq, [], [], []
if not isinstance(truncation_strategy, TruncationStrategy):
truncation_strategy = TruncationStrategy(truncation_strategy)
overflowing_tokens = []
overflowing_xpath_tags_seq = []
overflowing_xpath_subs_seq = []
overflowing_labels = []
if truncation_strategy == TruncationStrategy.ONLY_FIRST or (
truncation_strategy == TruncationStrategy.LONGEST_FIRST and pair_ids is None
):
if len(ids) > num_tokens_to_remove:
window_len = min(len(ids), stride + num_tokens_to_remove)
overflowing_tokens = ids[-window_len:]
overflowing_xpath_tags_seq = xpath_tags_seq[-window_len:]
overflowing_xpath_subs_seq = xpath_subs_seq[-window_len:]
ids = ids[:-num_tokens_to_remove]
xpath_tags_seq = xpath_tags_seq[:-num_tokens_to_remove]
xpath_subs_seq = xpath_subs_seq[:-num_tokens_to_remove]
labels = labels[:-num_tokens_to_remove]
else:
error_msg = (
f"We need to remove {num_tokens_to_remove} to truncate the input "
f"but the first sequence has a length {len(ids)}. "
)
if truncation_strategy == TruncationStrategy.ONLY_FIRST:
error_msg = (
error_msg
+ "Please select another truncation strategy than "
f"{truncation_strategy}, for instance 'longest_first' or 'only_second'."
)
logger.error(error_msg)
elif truncation_strategy == TruncationStrategy.LONGEST_FIRST:
logger.warning(
"Be aware, overflowing tokens are not returned for the setting you have chosen,"
f" i.e. sequence pairs with the '{TruncationStrategy.LONGEST_FIRST.value}' "
"truncation strategy. So the returned list will always be empty even if some "
"tokens have been removed."
)
for _ in range(num_tokens_to_remove):
if pair_ids is None or len(ids) > len(pair_ids):
ids = ids[:-1]
xpath_tags_seq = xpath_tags_seq[:-1]
xpath_subs_seq = xpath_subs_seq[:-1]
labels = labels[:-1]
else:
pair_ids = pair_ids[:-1]
pair_xpath_tags_seq = pair_xpath_tags_seq[:-1]
pair_xpath_subs_seq = pair_xpath_subs_seq[:-1]
elif truncation_strategy == TruncationStrategy.ONLY_SECOND and pair_ids is not None:
if len(pair_ids) > num_tokens_to_remove:
window_len = min(len(pair_ids), stride + num_tokens_to_remove)
overflowing_tokens = pair_ids[-window_len:]
overflowing_xpath_tags_seq = pair_xpath_tags_seq[-window_len:]
overflowing_xpath_subs_seq = pair_xpath_subs_seq[-window_len:]
pair_ids = pair_ids[:-num_tokens_to_remove]
pair_xpath_tags_seq = pair_xpath_tags_seq[:-num_tokens_to_remove]
pair_xpath_subs_seq = pair_xpath_subs_seq[:-num_tokens_to_remove]
else:
logger.error(
f"We need to remove {num_tokens_to_remove} to truncate the input "
f"but the second sequence has a length {len(pair_ids)}. "
f"Please select another truncation strategy than {truncation_strategy}, "
"for instance 'longest_first' or 'only_first'."
)
return (
ids,
xpath_tags_seq,
xpath_subs_seq,
pair_ids,
pair_xpath_tags_seq,
pair_xpath_subs_seq,
labels,
overflowing_tokens,
overflowing_xpath_tags_seq,
overflowing_xpath_subs_seq,
overflowing_labels,
)
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Args:
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
>= 7.5 (Volta).
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
required_input = encoded_inputs[self.model_input_names[0]]
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(required_input)
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = padding_strategy != PaddingStrategy.DO_NOT_PAD and len(required_input) != max_length
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(required_input)
if needs_to_be_padded:
difference = max_length - len(required_input)
if self.padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = (
encoded_inputs["token_type_ids"] + [self.pad_token_type_id] * difference
)
if "xpath_tags_seq" in encoded_inputs:
encoded_inputs["xpath_tags_seq"] = (
encoded_inputs["xpath_tags_seq"] + [self.pad_xpath_tags_seq] * difference
)
if "xpath_subs_seq" in encoded_inputs:
encoded_inputs["xpath_subs_seq"] = (
encoded_inputs["xpath_subs_seq"] + [self.pad_xpath_subs_seq] * difference
)
if "labels" in encoded_inputs:
encoded_inputs["labels"] = encoded_inputs["labels"] + [self.pad_token_label] * difference
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs[self.model_input_names[0]] = required_input + [self.pad_token_id] * difference
elif self.padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [self.pad_token_type_id] * difference + encoded_inputs[
"token_type_ids"
]
if "xpath_tags_seq" in encoded_inputs:
encoded_inputs["xpath_tags_seq"] = [self.pad_xpath_tags_seq] * difference + encoded_inputs[
"xpath_tags_seq"
]
if "xpath_subs_seq" in encoded_inputs:
encoded_inputs["xpath_subs_seq"] = [self.pad_xpath_subs_seq] * difference + encoded_inputs[
"xpath_subs_seq"
]
if "labels" in encoded_inputs:
encoded_inputs["labels"] = [self.pad_token_label] * difference + encoded_inputs["labels"]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs[self.model_input_names[0]] = [self.pad_token_id] * difference + required_input
else:
raise ValueError("Invalid padding strategy:" + str(self.padding_side))
return encoded_inputs
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