Diff converter v2 (#30868)

* current working example!

* commit regex and result file

* update

* nit

* push the conversion file

* oups

* roadmap and nits

* attempt diffs for 3 files

* persimmon

* nit

* add diff file that is the same as the modeling_llama.py

* fix rope nits

* updates

* updates with converted versions

* give some breathing space to the code

* delete

* update

* update

* push the actual result

* update regex patterns

* update regex patterns

* fix some issues

* fix some issues

* fix some issues

* updates

* updates

* updates

* updates

* updates

* revert changes done to llama

* updates

* update gemma

* updates

* oups

* current state

* current state

* update

* ouiiii

* nit

* clear diffs

* nit

* fixup

* update

* doc 🚀

* 🔥

* for now use gemma

* deal with comments

* style

* handle funtions

* deal with assigns

* todos

* process inheritage

* keep decorators?

* 🤗

* deal with duplicates

* fixup

* correctly remove duplicate code

* run ruff post script

* ruff deals pretty well with imports, let's leave it to him

* ah maybe not lol

* for now remove all imports from child.

* nit

* conversion of llama

* okay

* convert starcoder2

* synch with main

* update llama diff

* updates

* https://docs.astral.sh/ruff/rules/redefined-while-unused/

 fixes the imports, bit needs later version of ruff

* updates

* okay actual state

* non zero exit

* update!

* revert unrelated

* remove other diff files

* updates

* cleanup

* update

* less diff!

* stash

* current updates

* updates

* No need for call

* finished fining deps

* update

* current changes

* current state

* current state

* new status

* nit

* finally

* fixes

* nits

* order is now expected

* use logger info instead of prints

* fixup

* up

* nit

* update

* nits

* update

* correct merge

* update

* update

* update

* add warning

* update caution message

* update

* better merging strategy

* copy class statements :wink

* fixups

* nits

* update

* Apply suggestions from code review
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

* nits

* smaller header

* do cleanup some stuff

* even simpler header?

* fixup

* updates

* ruff

* update examples

* nit

* TODO

* state

* OUUUUUUF

* current state

* nits

* final state

* add a readme

* fixup

* remove diff llama

* fix

* nit

* dummy noy funny

* ruff format tests src utils --check

* everless diffs

* less diffs and fix test

* fixes

* naming nit?

* update converter and add supper example

* nits

* updated for function signatures

* update

* update

* add converted dummies

* autoformat

* single target assign fix

* fixup

* fix some imports

* fixes

* don't push them

* `# noqa: F841`

---------
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>

examples/diff-conversion/README.md

+# Using the `diff_converter` linter
+
+`pip install libcst` is a must!
+
+# `sh examples/diff-conversion/convert_examples.sh` to get the converted outputs
+
+The diff converter is a new `linter` specific to `transformers`. It allows us to unpack inheritance in python to convert a modular `diff` file like `diff_gemma.py` into a `single model single file`. 
+
+Examples of possible usage are available in the `examples/diff-conversion`, or `diff_gemma` for a full model usage.
+
+`python utils/diff_model_converter.py --files_to_parse "/Users/arthurzucker/Work/transformers/examples/diff-conversion/diff_my_new_model2.py"`
+
+## How it works
+We use the `libcst` parser to produce an AST representation of the `diff_xxx.py` file. For any imports that are made from `transformers.models.modeling_xxxx` we parse the source code of that module, and build a class dependency mapping, which allows us to unpack the difference dependencies.
+
+The code from the `diff` file and the class dependency mapping are "merged" to produce the single model single file. 
+We use ruff to automatically remove the potential duplicate imports.
+
+## Why we use libcst instead of the native AST?
+AST is super powerful, but it does not keep the `docstring`, `comment` or code formatting. Thus we decided to go with `libcst`
\ No newline at end of file

examples/diff-conversion/convert_examples.sh

+#!/bin/bash
+
+# Iterate over each file in the current directory
+for file in examples/diff-conversion/diff_*; do
+    # Check if it's a regular file
+    if [ -f "$file" ]; then
+        # Call the Python script with the file name as an argument
+        python utils/diff_model_converter.py --files_to_parse "$file"
+    fi
+done
\ No newline at end of file

examples/diff-conversion/diff_dummy.py

+from math import log
+from typing import List, Optional, Tuple, Union
+
+import torch
+
+from transformers import Cache
+from transformers.modeling_outputs import CausalLMOutputWithPast
+from transformers.models.llama.modeling_llama import LlamaModel
+
+
+def _pre_process_input(input_ids):
+    print(log(input_ids))
+    return input_ids
+
+
+# example where we need some deps and some functions
+class DummyModel(LlamaModel):
+    def forward(
+        self,
+        input_ids: torch.LongTensor = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        position_ids: Optional[torch.LongTensor] = None,
+        past_key_values: Optional[Union[Cache, List[torch.FloatTensor]]] = None,
+        inputs_embeds: Optional[torch.FloatTensor] = None,
+        use_cache: Optional[bool] = None,
+        output_attentions: Optional[bool] = None,
+        output_hidden_states: Optional[bool] = None,
+        return_dict: Optional[bool] = None,
+        cache_position: Optional[torch.LongTensor] = None,
+    ) -> Union[Tuple, CausalLMOutputWithPast]:
+        input_ids = _pre_process_input(input_ids)
+
+        return super().forward(
+            None,
+            attention_mask,
+            position_ids,
+            past_key_values,
+            inputs_embeds,
+            use_cache,
+            output_attentions,
+            output_hidden_states,
+            return_dict,
+            cache_position,
+        )

examples/diff-conversion/diff_my_new_model.py

+from transformers.models.llama.configuration_llama import LlamaConfig
+
+
+# Example where we only want to only add a new config argument and new arg doc
+# here there is no `ARG` so we are gonna take parent doc
+class MyNewModelConfig(LlamaConfig):
+    r"""
+    mlp_bias (`bool`, *optional*, defaults to `False`)
+    """
+
+    def __init__(self, mlp_bias=True, new_param=0, **super_kwargs):
+        self.mlp_bias = mlp_bias
+        self.new_param = new_param
+        super().__init__(self, **super_kwargs)

examples/diff-conversion/diff_my_new_model2.py

+from transformers.models.gemma.modeling_gemma import GemmaForSequenceClassification
+from transformers.models.llama.configuration_llama import LlamaConfig
+
+
+# Example where we only want to only modify the docstring
+class MyNewModel2Config(LlamaConfig):
+    r"""
+    This is the configuration class to store the configuration of a [`GemmaModel`]. It is used to instantiate an Gemma
+    model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
+    defaults will yield a similar configuration to that of the Gemma-7B.
+    e.g. [google/gemma-7b](https://huggingface.co/google/gemma-7b)
+    Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
+    documentation from [`PretrainedConfig`] for more information.
+    Args:
+        vocab_size (`int`, *optional*, defaults to 256000):
+            Vocabulary size of the Gemma model. Defines the number of different tokens that can be represented by the
+            `inputs_ids` passed when calling [`GemmaModel`]
+    ```python
+    >>> from transformers import GemmaModel, GemmaConfig
+    >>> # Initializing a Gemma gemma-7b style configuration
+    >>> configuration = GemmaConfig()
+    >>> # Initializing a model from the gemma-7b style configuration
+    >>> model = GemmaModel(configuration)
+    >>> # Accessing the model configuration
+    >>> configuration = model.config
+    ```"""
+
+
+# Example where alllllll the dependencies are fetched to just copy the entire class
+class MyNewModel2ForSequenceClassification(GemmaForSequenceClassification):
+    pass

examples/diff-conversion/diff_new_model.py

+# Example where we only want to overwrite the defaults of an init
+
+from transformers.models.gemma.configuration_gemma import GemmaConfig
+
+
+class NewModelConfig(GemmaConfig):
+    def __init__(
+        self,
+        vocab_size=256030,
+        hidden_size=64,
+        intermediate_size=90,
+        num_hidden_layers=28,
+        num_attention_heads=16,
+        num_key_value_heads=16,
+        head_dim=256,
+        hidden_act="gelu_pytorch_tanh",
+        hidden_activation=None,
+        max_position_embeddings=1500,
+        initializer_range=0.02,
+        rms_norm_eps=1e-6,
+        use_cache=True,
+        pad_token_id=0,
+        eos_token_id=1,
+        bos_token_id=2,
+        tie_word_embeddings=True,
+        rope_theta=10000.0,
+        attention_bias=False,
+        attention_dropout=0.0,
+    ):
+        super().__init__(self)

examples/diff-conversion/diff_super.py

+from typing import List, Optional, Tuple, Union
+
+import torch
+
+from transformers import Cache
+from transformers.modeling_outputs import CausalLMOutputWithPast
+from transformers.models.llama.modeling_llama import LlamaModel
+
+
+# example where we need some deps and some functions
+class SuperModel(LlamaModel):
+    def forward(
+        self,
+        input_ids: torch.LongTensor = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        position_ids: Optional[torch.LongTensor] = None,
+        past_key_values: Optional[Union[Cache, List[torch.FloatTensor]]] = None,
+        inputs_embeds: Optional[torch.FloatTensor] = None,
+        use_cache: Optional[bool] = None,
+        output_attentions: Optional[bool] = None,
+        output_hidden_states: Optional[bool] = None,
+        return_dict: Optional[bool] = None,
+        cache_position: Optional[torch.LongTensor] = None,
+    ) -> Union[Tuple, CausalLMOutputWithPast]:
+        out = super().forward(
+            input_ids,
+            attention_mask,
+            position_ids,
+            past_key_values,
+            inputs_embeds,
+            use_cache,
+            output_attentions,
+            output_hidden_states,
+            return_dict,
+            cache_position,
+        )
+        out.logits *= 2**4
+        return out

src/transformers/models/gemma/configuration_gemma.py

+#           🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
+#               This file was automatically generated from <path_to_diff_file.py>.
+#         Do NOT edit this file manually as any edits will be overwritten by the generation of
+#         the file from the diff. If any change should be done, please apply the change to the
+#                                    diff.py file directly.
+#           🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
 # coding=utf-8
-# Copyright 2024 The HuggingFace Inc. team. All rights reserved.
+# Copyright 2024 Google Inc. HuggingFace Inc. team. All rights reserved.
+#
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -12,13 +19,9 @@
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
-"""Gemma model configuration"""
-
-from ...configuration_utils import PretrainedConfig
-from ...utils import logging
 
 
-logger = logging.get_logger(__name__)
+from transformers import PretrainedConfig
 
 
 class GemmaConfig(PretrainedConfig):
@@ -26,13 +29,9 @@ class GemmaConfig(PretrainedConfig):
     This is the configuration class to store the configuration of a [`GemmaModel`]. It is used to instantiate an Gemma
     model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
     defaults will yield a similar configuration to that of the Gemma-7B.
-
     e.g. [google/gemma-7b](https://huggingface.co/google/gemma-7b)
-
     Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
     documentation from [`PretrainedConfig`] for more information.
-
-
     Args:
         vocab_size (`int`, *optional*, defaults to 256000):
             Vocabulary size of the Gemma model. Defines the number of different tokens that can be represented by the
@@ -83,16 +82,12 @@ class GemmaConfig(PretrainedConfig):
             Whether to use a bias in the query, key, value and output projection layers during self-attention.
         attention_dropout (`float`, *optional*, defaults to 0.0):
             The dropout ratio for the attention probabilities.
-
     ```python
     >>> from transformers import GemmaModel, GemmaConfig
-
     >>> # Initializing a Gemma gemma-7b style configuration
     >>> configuration = GemmaConfig()
-
     >>> # Initializing a model from the gemma-7b style configuration
     >>> model = GemmaModel(configuration)
-
     >>> # Accessing the model configuration
     >>> configuration = model.config
     ```"""

src/transformers/models/gemma/modeling_gemma.py

+#           🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
+#               This file was automatically generated from <path_to_diff_file.py>.
+#         Do NOT edit this file manually as any edits will be overwritten by the generation of
+#         the file from the diff. If any change should be done, please apply the change to the
+#                                    diff.py file directly.
+#           🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨🚨
 # coding=utf-8
 # Copyright 2024 Google Inc. HuggingFace Inc. team. All rights reserved.
 #
@@ -13,8 +19,6 @@
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
-"""PyTorch Gemma model."""
-
 import math
 from typing import List, Optional, Tuple, Union
 
@@ -26,10 +30,7 @@ from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
 
 from ...activations import ACT2FN
 from ...cache_utils import Cache, DynamicCache, StaticCache
-from ...modeling_attn_mask_utils import (
-    AttentionMaskConverter,
-    _prepare_4d_causal_attention_mask,
-)
+from ...modeling_attn_mask_utils import AttentionMaskConverter
 from ...modeling_outputs import (
     BaseModelOutputWithPast,
     CausalLMOutputWithPast,
@@ -37,7 +38,7 @@ from ...modeling_outputs import (
     TokenClassifierOutput,
 )
 from ...modeling_utils import PreTrainedModel
-from ...pytorch_utils import ALL_LAYERNORM_LAYERS, is_torch_greater_or_equal_than_1_13
+from ...pytorch_utils import ALL_LAYERNORM_LAYERS
 from ...utils import (
     add_start_docstrings,
     add_start_docstrings_to_model_forward,
@@ -46,7 +47,6 @@ from ...utils import (
     logging,
     replace_return_docstrings,
 )
-from ...utils.import_utils import is_torch_fx_available
 from .configuration_gemma import GemmaConfig
 
 
@@ -55,25 +55,14 @@ if is_flash_attn_2_available():
     from flash_attn.bert_padding import index_first_axis, pad_input, unpad_input  # noqa
 
 
-# This makes `_prepare_4d_causal_attention_mask` a leaf function in the FX graph.
-# It means that the function will not be traced through and simply appear as a node in the graph.
-if is_torch_fx_available():
-    if not is_torch_greater_or_equal_than_1_13:
-        import torch.fx
-
-    _prepare_4d_causal_attention_mask = torch.fx.wrap(_prepare_4d_causal_attention_mask)
-
-
 logger = logging.get_logger(__name__)
 
-_CONFIG_FOR_DOC = "GemmaConfig"
-
 
 def _get_unpad_data(attention_mask):
     seqlens_in_batch = attention_mask.sum(dim=-1, dtype=torch.int32)
     indices = torch.nonzero(attention_mask.flatten(), as_tuple=False).flatten()
     max_seqlen_in_batch = seqlens_in_batch.max().item()
-    cu_seqlens = F.pad(torch.cumsum(seqlens_in_batch, dim=0, dtype=torch.torch.int32), (1, 0))
+    cu_seqlens = F.pad(torch.cumsum(seqlens_in_batch, dim=0, dtype=torch.int32), (1, 0))
     return (
         indices,
         cu_seqlens,
@@ -108,7 +97,6 @@ class GemmaRotaryEmbedding(nn.Module):
         self.dim = dim
         self.max_position_embeddings = max_position_embeddings
         self.base = base
-
         inv_freq = 1.0 / (self.base ** (torch.arange(0, self.dim, 2, dtype=torch.int64).float() / self.dim))
         self.register_buffer("inv_freq", tensor=inv_freq, persistent=False)
 
@@ -130,7 +118,35 @@ class GemmaRotaryEmbedding(nn.Module):
         return cos.to(dtype=x.dtype), sin.to(dtype=x.dtype)
 
 
-# Copied from transformers.models.llama.modeling_llama.rotate_half
+class GemmaLinearScalingRotaryEmbedding(GemmaRotaryEmbedding):
+    """GemmaRotaryEmbedding extended with linear scaling. Credits to the Reddit user /u/kaiokendev"""
+
+    def forward(self, x, position_ids):
+        # difference to the original RoPE: a scaling factor is aplied to the position ids
+        position_ids = position_ids.float() / self.scaling_factor
+        cos, sin = super().forward(x, position_ids)
+        return cos, sin
+
+
+class GemmaDynamicNTKScalingRotaryEmbedding(GemmaRotaryEmbedding):
+    """GemmaRotaryEmbedding extended with Dynamic NTK scaling. Credits to the Reddit users /u/bloc97 and /u/emozilla"""
+
+    def forward(self, x, position_ids):
+        # difference to the original RoPE: inv_freq is recomputed when the sequence length > original length
+        seq_len = torch.max(position_ids) + 1
+        if seq_len > self.max_position_embeddings:
+            base = self.base * (
+                (self.scaling_factor * seq_len / self.max_position_embeddings) - (self.scaling_factor - 1)
+            ) ** (self.dim / (self.dim - 2))
+            inv_freq = 1.0 / (
+                base ** (torch.arange(0, self.dim, 2, dtype=torch.int64).float().to(x.device) / self.dim)
+            )
+            self.register_buffer("inv_freq", inv_freq, persistent=False)  # TODO joao: this may break with compilation
+
+        cos, sin = super().forward(x, position_ids)
+        return cos, sin
+
+
 def rotate_half(x):
     """Rotates half the hidden dims of the input."""
     x1 = x[..., : x.shape[-1] // 2]
@@ -138,7 +154,6 @@ def rotate_half(x):
     return torch.cat((-x2, x1), dim=-1)
 
 
-# Copied from transformers.models.llama.modeling_llama.apply_rotary_pos_emb
 def apply_rotary_pos_emb(q, k, cos, sin, position_ids=None, unsqueeze_dim=1):
     """Applies Rotary Position Embedding to the query and key tensors.
 
@@ -190,7 +205,6 @@ class GemmaMLP(nn.Module):
         return self.down_proj(self.act_fn(self.gate_proj(x)) * self.up_proj(x))
 
 
-# Copied from transformers.models.llama.modeling_llama.repeat_kv
 def repeat_kv(hidden_states: torch.Tensor, n_rep: int) -> torch.Tensor:
     """
     This is the equivalent of torch.repeat_interleave(x, dim=1, repeats=n_rep). The hidden states go from (batch,
@@ -206,7 +220,6 @@ def repeat_kv(hidden_states: torch.Tensor, n_rep: int) -> torch.Tensor:
 class GemmaAttention(nn.Module):
     """Multi-headed attention from 'Attention Is All You Need' paper"""
 
-    # Ignore copy
     def __init__(self, config: GemmaConfig, layer_idx: Optional[int] = None):
         super().__init__()
         self.config = config
@@ -303,7 +316,6 @@ class GemmaAttention(nn.Module):
         return attn_output, attn_weights, past_key_value
 
 
-# Copied from transformers.models.llama.modeling_llama.LlamaFlashAttention2 with Llama->Gemma
 class GemmaFlashAttention2(GemmaAttention):
     """
     Gemma flash attention module. This module inherits from `GemmaAttention` as the weights of the module stays
@@ -319,7 +331,6 @@ class GemmaFlashAttention2(GemmaAttention):
         # Beware that with flash_attn<2.1, using q_seqlen != k_seqlen (except for the case q_seqlen == 1) produces a wrong mask (top-left).
         self._flash_attn_uses_top_left_mask = not is_flash_attn_greater_or_equal_2_10()
 
-    # Ignore copy
     def forward(
         self,
         hidden_states: torch.Tensor,
@@ -329,13 +340,13 @@ class GemmaFlashAttention2(GemmaAttention):
         output_attentions: bool = False,
         use_cache: bool = False,
         cache_position: Optional[torch.LongTensor] = None,
-        **kwargs,
     ) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
         if isinstance(past_key_value, StaticCache):
             raise ValueError(
                 "`static` cache implementation is not compatible with `attn_implementation==flash_attention_2` "
                 "make sure to use `sdpa` in the mean time, and open an issue at https://github.com/huggingface/transformers"
             )
+
         output_attentions = False
 
         bsz, q_len, _ = hidden_states.size()
@@ -351,8 +362,8 @@ class GemmaFlashAttention2(GemmaAttention):
         key_states = key_states.view(bsz, q_len, self.num_key_value_heads, self.head_dim).transpose(1, 2)
         value_states = value_states.view(bsz, q_len, self.num_key_value_heads, self.head_dim).transpose(1, 2)
 
-        cos, sin = self.rotary_emb(value_states, position_ids, seq_len=None)
-        query_states, key_states = apply_rotary_pos_emb(query_states, key_states, cos, sin, None)
+        cos, sin = self.rotary_emb(value_states, position_ids)
+        query_states, key_states = apply_rotary_pos_emb(query_states, key_states, cos, sin)
 
         if past_key_value is not None:
             # sin and cos are specific to RoPE models; cache_position needed for the static cache
@@ -397,7 +408,7 @@ class GemmaFlashAttention2(GemmaAttention):
             query_states, key_states, value_states, attention_mask, q_len, dropout=dropout_rate
         )
 
-        attn_output = attn_output.reshape(bsz, q_len, -1).contiguous()
+        attn_output = attn_output.reshape(bsz, q_len, self.hidden_size).contiguous()
         attn_output = self.o_proj(attn_output)
 
         if not output_attentions:
@@ -503,7 +514,6 @@ class GemmaFlashAttention2(GemmaAttention):
         )
 
 
-# Copied from transformers.models.llama.modeling_llama.LlamaSdpaAttention with Llama->Gemma
 class GemmaSdpaAttention(GemmaAttention):
     """
     Gemma attention module using torch.nn.functional.scaled_dot_product_attention. This module inherits from
@@ -511,7 +521,7 @@ class GemmaSdpaAttention(GemmaAttention):
     SDPA API.
     """
 
-    # Ignore copy
+    # Adapted from GemmaAttention.forward
     def forward(
         self,
         hidden_states: torch.Tensor,
@@ -548,8 +558,8 @@ class GemmaSdpaAttention(GemmaAttention):
         key_states = key_states.view(bsz, q_len, self.num_key_value_heads, self.head_dim).transpose(1, 2)
         value_states = value_states.view(bsz, q_len, self.num_key_value_heads, self.head_dim).transpose(1, 2)
 
-        cos, sin = self.rotary_emb(value_states, position_ids, seq_len=None)
-        query_states, key_states = apply_rotary_pos_emb(query_states, key_states, cos, sin, None)
+        cos, sin = self.rotary_emb(value_states, position_ids)
+        query_states, key_states = apply_rotary_pos_emb(query_states, key_states, cos, sin)
 
         if past_key_value is not None:
             # sin and cos are specific to RoPE models; cache_position needed for the static cache
@@ -584,7 +594,7 @@ class GemmaSdpaAttention(GemmaAttention):
         )
 
         attn_output = attn_output.transpose(1, 2).contiguous()
-        attn_output = attn_output.view(bsz, q_len, -1)
+        attn_output = attn_output.view(bsz, q_len, self.hidden_size)
 
         attn_output = self.o_proj(attn_output)
 
@@ -598,7 +608,6 @@ GEMMA_ATTENTION_CLASSES = {
 }
 
 
-# Copied from transformers.models.llama.modeling_llama.LlamaDecoderLayer with LLAMA->GEMMA,Llama->Gemma
 class GemmaDecoderLayer(nn.Module):
     def __init__(self, config: GemmaConfig, layer_idx: int):
         super().__init__()
@@ -692,9 +701,8 @@ class GemmaPreTrainedModel(PreTrainedModel):
     config_class = GemmaConfig
     base_model_prefix = "model"
     supports_gradient_checkpointing = True
-    _keep_in_fp32_modules = ["inv_freq", "rotary_emb", "cos_cached", "sin_cached"]
     _no_split_modules = ["GemmaDecoderLayer"]
-    _skip_keys_device_placement = ["past_key_values", "causal_mask"]
+    _skip_keys_device_placement = ["past_key_values"]
     _supports_flash_attn_2 = True
     _supports_sdpa = True
     _supports_cache_class = True
@@ -713,6 +721,9 @@ class GemmaPreTrainedModel(PreTrainedModel):
                 module.weight.data[module.padding_idx].zero_()
 
 
+_CONFIG_FOR_DOC = "GemmaConfig"
+
+
 GEMMA_INPUTS_DOCSTRING = r"""
     Args:
         input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
@@ -821,7 +832,6 @@ class GemmaModel(GemmaPreTrainedModel):
         self.embed_tokens = value
 
     @add_start_docstrings_to_model_forward(GEMMA_INPUTS_DOCSTRING)
-    # Ignore copy
     def forward(
         self,
         input_ids: torch.LongTensor = None,
@@ -989,6 +999,8 @@ class GemmaModel(GemmaPreTrainedModel):
 
         if attention_mask is not None and attention_mask.dim() == 4:
             # in this case we assume that the mask comes already in inverted form and requires no inversion or slicing
+            if attention_mask.max() != 0:
+                raise ValueError("Custom 4D attention mask should be passed in inverted form with max==0`")
             causal_mask = attention_mask
         else:
             causal_mask = torch.full(
@@ -1020,7 +1032,6 @@ class GemmaModel(GemmaPreTrainedModel):
         return causal_mask
 
 
-# Copied from transformers.models.llama.modeling_llama.LlamaForCausalLM with LLAMA->GEMMA,Llama->Gemma,llama->gemma
 class GemmaForCausalLM(GemmaPreTrainedModel):
     _tied_weights_keys = ["lm_head.weight"]
 
@@ -1051,7 +1062,6 @@ class GemmaForCausalLM(GemmaPreTrainedModel):
     def get_decoder(self):
         return self.model
 
-    # Ignore copy
     @add_start_docstrings_to_model_forward(GEMMA_INPUTS_DOCSTRING)
     @replace_return_docstrings(output_type=CausalLMOutputWithPast, config_class=_CONFIG_FOR_DOC)
     def forward(
@@ -1244,7 +1254,6 @@ class GemmaForCausalLM(GemmaPreTrainedModel):
     """,
     GEMMA_START_DOCSTRING,
 )
-# Copied from transformers.models.llama.modeling_llama.LlamaForSequenceClassification with LLAMA->GEMMA,Llama->Gemma
 class GemmaForSequenceClassification(GemmaPreTrainedModel):
     def __init__(self, config):
         super().__init__(config)
@@ -1360,7 +1369,6 @@ class GemmaForSequenceClassification(GemmaPreTrainedModel):
     """,
     GEMMA_START_DOCSTRING,
 )
-# Copied from transformers.models.llama.modeling_llama.LlamaForTokenClassification with Llama->Gemma, LLAMA->GEMMA
 class GemmaForTokenClassification(GemmaPreTrainedModel):
     def __init__(self, config):
         super().__init__(config)

src/transformers/models/llama/modeling_llama.py

@@ -17,8 +17,6 @@
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
-"""PyTorch LLaMA model."""
-
 import math
 from typing import List, Optional, Tuple, Union
 

utils/check_copies.py

@@ -559,8 +559,11 @@ def get_indent(code: str) -> str:
     return ""
 
 
-def run_ruff(code):
-    command = ["ruff", "format", "-", "--config", "pyproject.toml", "--silent"]
+def run_ruff(code, check=False):
+    if check:
+        command = ["ruff", "check", "-", "--fix", "--exit-zero"]
+    else:
+        command = ["ruff", "format", "-", "--config", "pyproject.toml", "--silent"]
     process = subprocess.Popen(command, stdout=subprocess.PIPE, stderr=subprocess.PIPE, stdin=subprocess.PIPE)
     stdout, _ = process.communicate(input=code.encode())
     return stdout.decode()