test_distributed_retriever.py

import json
import os
import shutil
import sys
import tempfile
import unittest
from unittest import TestCase
from unittest.mock import patch

import numpy as np
from datasets import Dataset

import faiss
from transformers import BartConfig, BartTokenizer, DPRConfig, DPRQuestionEncoderTokenizer, RagConfig
from transformers.file_utils import is_datasets_available, is_faiss_available, is_psutil_available, is_torch_available
from transformers.integrations import is_ray_available
from transformers.models.bert.tokenization_bert import VOCAB_FILES_NAMES as DPR_VOCAB_FILES_NAMES
from transformers.models.rag.retrieval_rag import CustomHFIndex, RagRetriever
from transformers.models.roberta.tokenization_roberta import VOCAB_FILES_NAMES as BART_VOCAB_FILES_NAMES
from transformers.testing_utils import require_ray, require_torch_non_multi_gpu_but_fix_me


sys.path.append(os.path.join(os.getcwd()))  # noqa: E402 # noqa: E402 # isort:skip

if is_torch_available():
    from distributed_pytorch_retriever import RagPyTorchDistributedRetriever  # noqa: E402 # isort:skip
else:
    RagPyTorchDistributedRetriever = None

if is_ray_available():
    import ray  # noqa: E402 # isort:skip
    from distributed_ray_retriever import RagRayDistributedRetriever, RayRetriever  # noqa: E402 # isort:skip
else:
    ray = None
    RagRayDistributedRetriever = None
    RayRetriever = None


def require_distributed_retrieval(test_case):
    """
    Decorator marking a test that requires a set of dependencies necessary for pefrorm retrieval with
    :class:`~transformers.RagRetriever`.

    These tests are skipped when respective libraries are not installed.

    """
    if not (is_datasets_available() and is_faiss_available() and is_psutil_available()):
        test_case = unittest.skip("test requires Datasets, Faiss, psutil")(test_case)
    return test_case


@require_distributed_retrieval
class RagRetrieverTest(TestCase):
    def setUp(self):
        self.tmpdirname = tempfile.mkdtemp()
        self.retrieval_vector_size = 8

        # DPR tok
        vocab_tokens = [
            "[UNK]",
            "[CLS]",
            "[SEP]",
            "[PAD]",
            "[MASK]",
            "want",
            "##want",
            "##ed",
            "wa",
            "un",
            "runn",
            "##ing",
            ",",
            "low",
            "lowest",
        ]
        dpr_tokenizer_path = os.path.join(self.tmpdirname, "dpr_tokenizer")
        os.makedirs(dpr_tokenizer_path, exist_ok=True)
        self.vocab_file = os.path.join(dpr_tokenizer_path, DPR_VOCAB_FILES_NAMES["vocab_file"])
        with open(self.vocab_file, "w", encoding="utf-8") as vocab_writer:
            vocab_writer.write("".join([x + "\n" for x in vocab_tokens]))

        # BART tok
        vocab = [
            "l",
            "o",
            "w",
            "e",
            "r",
            "s",
            "t",
            "i",
            "d",
            "n",
            "\u0120",
            "\u0120l",
            "\u0120n",
            "\u0120lo",
            "\u0120low",
            "er",
            "\u0120lowest",
            "\u0120newer",
            "\u0120wider",
            "<unk>",
        ]
        vocab_tokens = dict(zip(vocab, range(len(vocab))))
        merges = ["#version: 0.2", "\u0120 l", "\u0120l o", "\u0120lo w", "e r", ""]
        self.special_tokens_map = {"unk_token": "<unk>"}

        bart_tokenizer_path = os.path.join(self.tmpdirname, "bart_tokenizer")
        os.makedirs(bart_tokenizer_path, exist_ok=True)
        self.vocab_file = os.path.join(bart_tokenizer_path, BART_VOCAB_FILES_NAMES["vocab_file"])
        self.merges_file = os.path.join(bart_tokenizer_path, BART_VOCAB_FILES_NAMES["merges_file"])
        with open(self.vocab_file, "w", encoding="utf-8") as fp:
            fp.write(json.dumps(vocab_tokens) + "\n")
        with open(self.merges_file, "w", encoding="utf-8") as fp:
            fp.write("\n".join(merges))

    def get_dpr_tokenizer(self) -> DPRQuestionEncoderTokenizer:
        return DPRQuestionEncoderTokenizer.from_pretrained(os.path.join(self.tmpdirname, "dpr_tokenizer"))

    def get_bart_tokenizer(self) -> BartTokenizer:
        return BartTokenizer.from_pretrained(os.path.join(self.tmpdirname, "bart_tokenizer"))

    def tearDown(self):
        shutil.rmtree(self.tmpdirname)

    def get_dummy_dataset(self):
        dataset = Dataset.from_dict(
            {
                "id": ["0", "1"],
                "text": ["foo", "bar"],
                "title": ["Foo", "Bar"],
                "embeddings": [np.ones(self.retrieval_vector_size), 2 * np.ones(self.retrieval_vector_size)],
            }
        )
        dataset.add_faiss_index("embeddings", string_factory="Flat", metric_type=faiss.METRIC_INNER_PRODUCT)
        return dataset

    def get_dummy_pytorch_distributed_retriever(
        self, init_retrieval: bool, port=12345
    ) -> RagPyTorchDistributedRetriever:
        dataset = self.get_dummy_dataset()
        config = RagConfig(
            retrieval_vector_size=self.retrieval_vector_size,
            question_encoder=DPRConfig().to_dict(),
            generator=BartConfig().to_dict(),
        )
        with patch("transformers.models.rag.retrieval_rag.load_dataset") as mock_load_dataset:
            mock_load_dataset.return_value = dataset
            retriever = RagPyTorchDistributedRetriever(
                config,
                question_encoder_tokenizer=self.get_dpr_tokenizer(),
                generator_tokenizer=self.get_bart_tokenizer(),
            )
            if init_retrieval:
                retriever.init_retrieval(port)
        return retriever

    def get_dummy_ray_distributed_retriever(self, init_retrieval: bool) -> RagRayDistributedRetriever:
        # Have to run in local mode because sys.path modifications at top of
        # file are not propogated to remote workers.
        # https://stackoverflow.com/questions/54338013/parallel-import-a-python-file-from-sibling-folder
        ray.init(local_mode=True)
        config = RagConfig(
            retrieval_vector_size=self.retrieval_vector_size,
            question_encoder=DPRConfig().to_dict(),
            generator=BartConfig().to_dict(),
        )
        remote_cls = ray.remote(RayRetriever)
        workers = [remote_cls.remote() for _ in range(1)]
        with patch("transformers.models.rag.retrieval_rag.load_dataset") as mock_load_dataset:
            mock_load_dataset.return_value = self.get_dummy_dataset()
            retriever = RagRayDistributedRetriever(
                config,
                question_encoder_tokenizer=self.get_dpr_tokenizer(),
                generator_tokenizer=self.get_bart_tokenizer(),
                retrieval_workers=workers,
            )
            if init_retrieval:
                retriever.init_retrieval()
        return retriever

    def get_dummy_custom_hf_index_pytorch_retriever(self, init_retrieval: bool, from_disk: bool, port=12345):
        dataset = self.get_dummy_dataset()
        config = RagConfig(
            retrieval_vector_size=self.retrieval_vector_size,
            question_encoder=DPRConfig().to_dict(),
            generator=BartConfig().to_dict(),
            index_name="custom",
        )
        if from_disk:
            config.passages_path = os.path.join(self.tmpdirname, "dataset")
            config.index_path = os.path.join(self.tmpdirname, "index.faiss")
            dataset.get_index("embeddings").save(os.path.join(self.tmpdirname, "index.faiss"))
            dataset.drop_index("embeddings")
            dataset.save_to_disk(os.path.join(self.tmpdirname, "dataset"))
            del dataset
            retriever = RagPyTorchDistributedRetriever(
                config,
                question_encoder_tokenizer=self.get_dpr_tokenizer(),
                generator_tokenizer=self.get_bart_tokenizer(),
            )
        else:
            retriever = RagPyTorchDistributedRetriever(
                config,
                question_encoder_tokenizer=self.get_dpr_tokenizer(),
                generator_tokenizer=self.get_bart_tokenizer(),
                index=CustomHFIndex(config.retrieval_vector_size, dataset),
            )
        if init_retrieval:
            retriever.init_retrieval(port)
        return retriever

    def get_dummy_custom_hf_index_ray_retriever(self, init_retrieval: bool, from_disk: bool):
        # Have to run in local mode because sys.path modifications at top of
        # file are not propogated to remote workers.
        # https://stackoverflow.com/questions/54338013/parallel-import-a-python-file-from-sibling-folder
        ray.init(local_mode=True)
        dataset = self.get_dummy_dataset()
        config = RagConfig(
            retrieval_vector_size=self.retrieval_vector_size,
            question_encoder=DPRConfig().to_dict(),
            generator=BartConfig().to_dict(),
            index_name="custom",
        )
        remote_cls = ray.remote(RayRetriever)
        workers = [remote_cls.remote() for _ in range(1)]
        if from_disk:
            config.passages_path = os.path.join(self.tmpdirname, "dataset")
            config.index_path = os.path.join(self.tmpdirname, "index.faiss")
            dataset.get_index("embeddings").save(os.path.join(self.tmpdirname, "index.faiss"))
            dataset.drop_index("embeddings")
            dataset.save_to_disk(os.path.join(self.tmpdirname, "dataset"))
            del dataset
            retriever = RagRayDistributedRetriever(
                config,
                question_encoder_tokenizer=self.get_dpr_tokenizer(),
                generator_tokenizer=self.get_bart_tokenizer(),
                retrieval_workers=workers,
                index=CustomHFIndex.load_from_disk(
                    vector_size=config.retrieval_vector_size,
                    dataset_path=config.passages_path,
                    index_path=config.index_path,
                ),
            )
        else:
            retriever = RagRayDistributedRetriever(
                config,
                question_encoder_tokenizer=self.get_dpr_tokenizer(),
                generator_tokenizer=self.get_bart_tokenizer(),
                retrieval_workers=workers,
                index=CustomHFIndex(config.retrieval_vector_size, dataset),
            )
        if init_retrieval:
            retriever.init_retrieval()
        return retriever

    def distributed_retriever_check(self, retriever: RagRetriever, hidden_states: np.array, n_docs: int) -> None:
        retrieved_doc_embeds, doc_ids, doc_dicts = retriever.retrieve(hidden_states, n_docs=n_docs)
        self.assertEqual(retrieved_doc_embeds.shape, (2, n_docs, self.retrieval_vector_size))
        self.assertEqual(len(doc_dicts), 2)
        self.assertEqual(sorted(doc_dicts[0]), ["embeddings", "id", "text", "title"])
        self.assertEqual(len(doc_dicts[0]["id"]), n_docs)
        self.assertEqual(doc_dicts[0]["id"][0], "1")  # max inner product is reached with second doc
        self.assertEqual(doc_dicts[1]["id"][0], "0")  # max inner product is reached with first doc
        self.assertListEqual(doc_ids.tolist(), [[1], [0]])

    @require_torch_non_multi_gpu_but_fix_me
    def test_pytorch_distributed_retriever_retrieve(self):
        n_docs = 1
        hidden_states = np.array(
            [np.ones(self.retrieval_vector_size), -np.ones(self.retrieval_vector_size)], dtype=np.float32
        )

        self.distributed_retriever_check(
            self.get_dummy_pytorch_distributed_retriever(init_retrieval=True), hidden_states, n_docs
        )

    @require_torch_non_multi_gpu_but_fix_me
    def test_custom_hf_index_pytorch_retriever_retrieve(self):
        n_docs = 1
        hidden_states = np.array(
            [np.ones(self.retrieval_vector_size), -np.ones(self.retrieval_vector_size)], dtype=np.float32
        )

        self.distributed_retriever_check(
            self.get_dummy_custom_hf_index_pytorch_retriever(init_retrieval=True, from_disk=False),
            hidden_states,
            n_docs,
        )

    @require_torch_non_multi_gpu_but_fix_me
    def test_custom_pytorch_distributed_retriever_retrieve_from_disk(self):
        n_docs = 1
        hidden_states = np.array(
            [np.ones(self.retrieval_vector_size), -np.ones(self.retrieval_vector_size)], dtype=np.float32
        )

        self.distributed_retriever_check(
            self.get_dummy_custom_hf_index_pytorch_retriever(init_retrieval=True, from_disk=True),
            hidden_states,
            n_docs,
        )

    @require_ray
    def test_ray_distributed_retriever_retrieve(self):
        n_docs = 1
        hidden_states = np.array(
            [np.ones(self.retrieval_vector_size), -np.ones(self.retrieval_vector_size)], dtype=np.float32
        )

        self.distributed_retriever_check(
            self.get_dummy_ray_distributed_retriever(init_retrieval=True), hidden_states, n_docs
        )
        ray.shutdown()

    @require_ray
    def test_custom_hf_index_ray_retriever_retrieve(self):
        n_docs = 1
        hidden_states = np.array(
            [np.ones(self.retrieval_vector_size), -np.ones(self.retrieval_vector_size)], dtype=np.float32
        )
        with self.assertRaises(ValueError):
            self.distributed_retriever_check(
                self.get_dummy_custom_hf_index_ray_retriever(init_retrieval=True, from_disk=False),
                hidden_states,
                n_docs,
            )
        ray.shutdown()

    @require_ray
    def test_custom_ray_distributed_retriever_retrieve_from_disk(self):
        n_docs = 1
        hidden_states = np.array(
            [np.ones(self.retrieval_vector_size), -np.ones(self.retrieval_vector_size)], dtype=np.float32
        )

        self.distributed_retriever_check(
            self.get_dummy_custom_hf_index_ray_retriever(init_retrieval=True, from_disk=True), hidden_states, n_docs
        )
        ray.shutdown()