run_glue.py

# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION.  All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""BERT finetuning runner."""

from __future__ import absolute_import, division, print_function

import argparse
import logging
import os
import random
from tqdm import tqdm, trange

import numpy as np

import torch
from torch.utils.data import (DataLoader, RandomSampler, SequentialSampler,
                              TensorDataset)
from torch.utils.data.distributed import DistributedSampler

from tensorboardX import SummaryWriter

from pytorch_transformers import WEIGHTS_NAME, CONFIG_NAME
from pytorch_transformers.modeling_bert import BertForSequenceClassification
from pytorch_transformers.tokenization_bert import BertTokenizer
from pytorch_transformers.optimization import BertAdam, WarmupLinearSchedule

from utils_glue import processors, output_modes, convert_examples_to_features, compute_metrics


logger = logging.getLogger(__name__)


def train(args, train_features, model):
    """ Train the model """
    if args.local_rank in [-1, 0]:
        tb_writer = SummaryWriter()

    # Convert in tensors and build dataloader
    all_input_ids = torch.tensor([f.input_ids for f in train_features], dtype=torch.long)
    all_input_mask = torch.tensor([f.input_mask for f in train_features], dtype=torch.long)
    all_segment_ids = torch.tensor([f.segment_ids for f in train_features], dtype=torch.long)
    if args.output_mode == "classification":
        all_label_ids = torch.tensor([f.label_id for f in train_features], dtype=torch.long)
    elif args.output_mode == "regression":
        all_label_ids = torch.tensor([f.label_id for f in train_features], dtype=torch.float)

    args.train_batch_size = args.train_batch_size // args.gradient_accumulation_steps

    train_data = TensorDataset(all_input_ids, all_input_mask, all_segment_ids, all_label_ids)
    train_sampler = RandomSampler(train_data) if args.local_rank == -1 else DistributedSampler(train_data)
    train_dataloader = DataLoader(train_data, sampler=train_sampler, batch_size=args.train_batch_size)

    num_train_optimization_steps = len(train_dataloader) // args.gradient_accumulation_steps * args.num_train_epochs

    # Prepare optimizer
    param_optimizer = list(model.named_parameters())
    no_decay = ['bias', 'LayerNorm.bias', 'LayerNorm.weight']
    optimizer_grouped_parameters = [
        {'params': [p for n, p in param_optimizer if not any(nd in n for nd in no_decay)], 'weight_decay': 0.01},
        {'params': [p for n, p in param_optimizer if any(nd in n for nd in no_decay)], 'weight_decay': 0.0}
        ]
    if args.fp16:
        try:
            from apex.optimizers import FP16_Optimizer, FusedAdam
        except ImportError:
            raise ImportError("Please install apex from https://www.github.com/nvidia/apex to use fp16 training.")
        optimizer = FusedAdam(optimizer_grouped_parameters, lr=args.learning_rate, bias_correction=False, max_grad_norm=1.0)
        if args.loss_scale == 0:
            optimizer = FP16_Optimizer(optimizer, dynamic_loss_scale=True)
        else:
            optimizer = FP16_Optimizer(optimizer, static_loss_scale=args.loss_scale)
        warmup_linear = WarmupLinearSchedule(warmup=args.warmup_proportion, t_total=num_train_optimization_steps)

    else:
        optimizer = BertAdam(optimizer_grouped_parameters,
                                lr=args.learning_rate,
                                warmup=args.warmup_proportion,
                                t_total=num_train_optimization_steps)

    # Train!
    logger.info("***** Running training *****")
    logger.info("  Num examples = %d", len(train_features))
    logger.info("  Batch size = %d", args.train_batch_size)
    logger.info("  Num steps = %d", num_train_optimization_steps)

    global_step = 0
    tr_loss = 0
    model.train()
    for _ in trange(int(args.num_train_epochs), desc="Epoch", disable=args.local_rank not in [-1, 0]):
        for step, batch in enumerate(tqdm(train_dataloader, desc="Iteration", disable=args.local_rank not in [-1, 0])):
            batch = tuple(t.to(args.device) for t in batch)
            input_ids, input_mask, segment_ids, label_ids = batch

            ouputs = model(input_ids, token_type_ids=segment_ids, attention_mask=input_mask, labels=label_ids)
            loss = ouputs[0]

            if args.n_gpu > 1:
                loss = loss.mean() # mean() to average on multi-gpu parallel training
            if args.gradient_accumulation_steps > 1:
                loss = loss / args.gradient_accumulation_steps

            loss.backward() if not args.fp16 else optimizer.backward(loss)

            tr_loss += loss.item()
            if (step + 1) % args.gradient_accumulation_steps == 0:
                if args.fp16:
                    # modify learning rate with special warm up BERT uses
                    # if args.fp16 is False, BertAdam is used that handles this automatically
                    lr_this_step = args.learning_rate * warmup_linear.get_lr(global_step, args.warmup_proportion)
                    for param_group in optimizer.param_groups:
                        param_group['lr'] = lr_this_step
                optimizer.step()
                optimizer.zero_grad()
                global_step += 1
                if args.local_rank in [-1, 0]:
                    if not args.fp16:
                        tb_writer.add_scalar('lr', optimizer.get_lr()[0], global_step)
                    tb_writer.add_scalar('loss', loss.item(), global_step)

    return global_step, tr_loss / global_step


def evalutate(args, eval_task, eval_output_dir, eval_features, model):
    """ Evaluate the model """
    if os.path.exists(eval_output_dir) and os.listdir(eval_output_dir) and args.do_train and not args.overwrite_output_dir:
        raise ValueError("Output directory ({}) already exists and is not empty. Use --overwrite_output_dir to overcome.".format(eval_output_dir))
    if not os.path.exists(eval_output_dir) and args.local_rank in [-1, 0]:
        os.makedirs(eval_output_dir)

    # Convert in tensors and build dataloader
    all_input_ids = torch.tensor([f.input_ids for f in eval_features], dtype=torch.long)
    all_input_mask = torch.tensor([f.input_mask for f in eval_features], dtype=torch.long)
    all_segment_ids = torch.tensor([f.segment_ids for f in eval_features], dtype=torch.long)
    if args.output_mode == "classification":
        all_label_ids = torch.tensor([f.label_id for f in eval_features], dtype=torch.long)
    elif args.output_mode == "regression":
        all_label_ids = torch.tensor([f.label_id for f in eval_features], dtype=torch.float)

    eval_data = TensorDataset(all_input_ids, all_input_mask, all_segment_ids, all_label_ids)
    # Note that DistributedSampler samples randomly
    eval_sampler = SequentialSampler(eval_data) if args.local_rank == -1 else DistributedSampler(eval_data)
    eval_dataloader = DataLoader(eval_data, sampler=eval_sampler, batch_size=args.eval_batch_size)

    # Eval!
    logger.info("***** Running evaluation *****")
    logger.info("  Num examples = %d", len(eval_examples))
    logger.info("  Batch size = %d", args.eval_batch_size)
    model.eval()
    eval_loss = 0
    nb_eval_steps = 0
    preds = None
    out_label_ids = None
    for batch in tqdm(eval_dataloader, desc="Evaluating"):
        batch = tuple(t.to(args.device) for t in batch)
        input_ids, input_mask, segment_ids, label_ids = batch

        with torch.no_grad():
            outputs = model(input_ids,
                            token_type_ids=segment_ids,
                            attention_mask=input_mask,
                            labels=label_ids)
            tmp_eval_loss, logits = outputs[:2]

        eval_loss += tmp_eval_loss.mean().item()
        nb_eval_steps += 1
        if preds is None:
            preds = logits.detach().cpu().numpy()
            out_label_ids = label_ids.detach().cpu().numpy()
        else:
            preds = np.append(preds, logits.detach().cpu().numpy(), axis=0)
            out_label_ids = np.append(out_label_ids, label_ids.detach().cpu().numpy(), axis=0)

    eval_loss = eval_loss / nb_eval_steps
    if args.output_mode == "classification":
        preds = np.argmax(preds, axis=1)
    elif args.output_mode == "regression":
        preds = np.squeeze(preds)
    result = compute_metrics(eval_task, preds, out_label_ids)

    output_eval_file = os.path.join(eval_output_dir, "eval_results.txt")
    with open(output_eval_file, "w") as writer:
        logger.info("***** Eval results *****")
        for key in sorted(result.keys()):
            logger.info("  %s = %s", key, str(result[key]))
            writer.write("%s = %s\n" % (key, str(result[key])))


def load_and_cache_examples(args, task, tokenizer, eval=False):
    processor = processors[task]()
    output_mode = output_modes[task]
    label_list = processor.get_labels()

    # Load and cache data
    processor = processors[task]()
    examples = processor.get_dev_examples(args.data_dir)
    cached_features_file = os.path.join(args.data_dir, '{}_{}_{}_{}'.format(
        'dev' if eval else 'train',
        list(filter(None, args.bert_model.split('/'))).pop(),
        str(args.max_seq_length),
        str(task)))

    if os.path.exists(cached_features_file):
        logger.info("Loading features from cached file %s", cached_features_file)
        features = torch.load(cached_features_file)
    else:
        features = convert_examples_to_features(examples, label_list, args.max_seq_length, tokenizer, output_mode)
        if args.local_rank == -1 or torch.distributed.get_rank() == 0:
            logger.info("Saving features into cached file %s", cached_features_file)
            torch.save(features, cached_features_file)

    return features


def main():
    parser = argparse.ArgumentParser()

    ## Required parameters
    parser.add_argument("--data_dir", default=None, type=str, required=True,
                        help="The input data dir. Should contain the .tsv files (or other data files) for the task.")
    parser.add_argument("--bert_model", default=None, type=str, required=True,
                        help="Bert pre-trained model selected in the list: bert-base-uncased, "
                        "bert-large-uncased, bert-base-cased, bert-large-cased, bert-base-multilingual-uncased, "
                        "bert-base-multilingual-cased, bert-base-chinese.")
    parser.add_argument("--task_name", default=None, type=str, required=True,
                        help="The name of the task to train.")
    parser.add_argument("--output_dir", default=None, type=str, required=True,
                        help="The output directory where the model predictions and checkpoints will be written.")

    ## Other parameters
    parser.add_argument("--cache_dir", default="", type=str,
                        help="Where do you want to store the pre-trained models downloaded from s3")
    parser.add_argument("--max_seq_length", default=128, type=int,
                        help="The maximum total input sequence length after WordPiece tokenization. \n"
                             "Sequences longer than this will be truncated, and sequences shorter \n"
                             "than this will be padded.")
    parser.add_argument("--do_train", action='store_true',
                        help="Whether to run training.")
    parser.add_argument("--do_eval", action='store_true',
                        help="Whether to run eval on the dev set.")
    parser.add_argument("--do_lower_case", action='store_true',
                        help="Set this flag if you are using an uncased model.")
    parser.add_argument("--train_batch_size", default=32, type=int,
                        help="Total batch size for training.")
    parser.add_argument("--eval_batch_size", default=8, type=int,
                        help="Total batch size for eval.")
    parser.add_argument('--gradient_accumulation_steps', type=int, default=1,
                        help="Number of updates steps to accumulate before performing a backward/update pass.")
    parser.add_argument("--learning_rate", default=5e-5, type=float,
                        help="The initial learning rate for Adam.")
    parser.add_argument("--num_train_epochs", default=3.0, type=float,
                        help="Total number of training epochs to perform.")
    parser.add_argument("--warmup_proportion", default=0.1, type=float,
                        help="Proportion of training to perform linear learning rate warmup for. "
                             "E.g., 0.1 = 10%% of training.")
    parser.add_argument("--no_cuda", action='store_true',
                        help="Avoid using CUDA when available")
    parser.add_argument('--overwrite_output_dir', action='store_true',
                        help="Overwrite the content of the output directory")
    parser.add_argument('--seed', type=int, default=42,
                        help="random seed for initialization")

    parser.add_argument('--fp16', action='store_true',
                        help="Whether to use 16-bit float precision instead of 32-bit")
    parser.add_argument('--loss_scale', type=float, default=0,
                        help="Loss scaling to improve fp16 numeric stability. Only used when fp16 set to True.\n"
                             "0 (default value): dynamic loss scaling.\n"
                             "Positive power of 2: static loss scaling value.\n")

    parser.add_argument("--local_rank", type=int, default=-1,
                        help="local_rank for distributed training on gpus")

    parser.add_argument('--server_ip', type=str, default='', help="Can be used for distant debugging.")
    parser.add_argument('--server_port', type=str, default='', help="Can be used for distant debugging.")
    args = parser.parse_args()

    # Setup distant debugging if needed
    if args.server_ip and args.server_port:
        # Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
        import ptvsd
        print("Waiting for debugger attach")
        ptvsd.enable_attach(address=(args.server_ip, args.server_port), redirect_output=True)
        ptvsd.wait_for_attach()

    # Setup CUDA, GPU & distributed training
    if args.local_rank == -1 or args.no_cuda:
        device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
        args.n_gpu = torch.cuda.device_count()
    else:  # Initializes the distributed backend which will take care of sychronizing nodes/GPUs
        torch.cuda.set_device(args.local_rank)
        device = torch.device("cuda", args.local_rank)
        torch.distributed.init_process_group(backend='nccl')
        args.n_gpu = 1
    args.device = device

    # Setup logging
    logging.basicConfig(level = logging.INFO if args.local_rank in [-1, 0] else logging.WARN)
    logger.info("device: {} n_gpu: {}, distributed training: {}, 16-bits training: {}".format(
        device, args.n_gpu, bool(args.local_rank != -1), args.fp16))

    # Setup seeds
    random.seed(args.seed)
    np.random.seed(args.seed)
    torch.manual_seed(args.seed)
    if args.n_gpu > 0:
        torch.cuda.manual_seed_all(args.seed)

    # Prepare GLUE task
    args.task_name = args.task_name.lower()
    if args.task_name not in processors:
        raise ValueError("Task not found: %s" % (args.task_name))
    processor = processors[args.task_name]()
    args.output_mode = output_modes[args.task_name]
    label_list = processor.get_labels()
    num_labels = len(label_list)

    # Load pretrained model and tokenizer
    if args.local_rank not in [-1, 0]:
        # Make sure only the first process in distributed training will download model & vocab
        torch.distributed.barrier()

    tokenizer = BertTokenizer.from_pretrained(args.bert_model, do_lower_case=args.do_lower_case)
    model = BertForSequenceClassification.from_pretrained(args.bert_model, num_labels=num_labels)

    if args.local_rank == 0:
        torch.distributed.barrier()

    # Distributed, parrallel and fp16 model
    if args.fp16:
        model.half()
    model.to(args.device)
    if args.local_rank != -1:
        model = torch.nn.parallel.DistributedDataParallel(model,
                                                          device_ids=[args.local_rank],
                                                          output_device=args.local_rank,
                                                          find_unused_parameters=True)
    elif args.n_gpu > 1:
        model = torch.nn.DataParallel(model)

    # Training
    if args.do_train:
        train_features = load_and_cache_examples(args, args.task_name, tokenizer, eval=False)
        global_step, tr_loss = train(args, train_features, model)
        logger.info(" global_step = %s, average loss = %s", global_step, tr_loss)


    # Saving best-practices: if you use defaults names for the model, you can reload it using from_pretrained()
    if args.do_train and (args.local_rank == -1 or torch.distributed.get_rank() == 0):
        # Save a trained model, configuration and tokenizer
        model_to_save = model.module if hasattr(model, 'module') else model  # Only save the model it-self

        # If we save using the predefined names, we can load using `from_pretrained`
        output_model_file = os.path.join(args.output_dir, WEIGHTS_NAME)
        output_config_file = os.path.join(args.output_dir, CONFIG_NAME)

        torch.save(model_to_save.state_dict(), output_model_file)
        model_to_save.config.to_json_file(output_config_file)
        tokenizer.save_vocabulary(args.output_dir)

        # Load a trained model and vocabulary that you have fine-tuned
        model = BertForSequenceClassification.from_pretrained(args.output_dir)
        tokenizer = BertTokenizer.from_pretrained(args.output_dir)

        # Good practice: save your training arguments together with the trained model
        output_args_file = os.path.join(args.output_dir, 'training_args.bin')
        torch.save(args, output_args_file)
    else:
        model = BertForSequenceClassification.from_pretrained(args.bert_model)

    model.to(args.device)

    # Evaluation
    if args.do_eval and (args.local_rank == -1 or torch.distributed.get_rank() == 0):
        # Handle MNLI double evaluation
        eval_task_names = ("mnli", "mnli-mm") if args.task_name == "mnli" else (args.task_name,)
        eval_outputs_dirs = (args.output_dir, args.output_dir + '-MM') if args.task_name == "mnli" else (args.output_dir,)

        for eval_task, eval_output_dir in zip(eval_task_names, eval_outputs_dirs):
            eval_features = load_and_cache_examples(args, eval_task, tokenizer, eval=True)

            evalutate(args, eval_task, eval_output_dir, eval_features, model)


if __name__ == "__main__":
    main()