utils.py 15.9 KB
Newer Older
limm's avatar
limm committed
1
2
3
4
import bz2
import gzip
import hashlib
import lzma
soumith's avatar
soumith committed
5
import os
soumith's avatar
soumith committed
6
import os.path
limm's avatar
limm committed
7
import pathlib
8
import re
limm's avatar
limm committed
9
import sys
10
import tarfile
11
12
import urllib
import urllib.error
limm's avatar
limm committed
13
14
15
16
import urllib.request
import zipfile
from typing import Any, Callable, Dict, IO, Iterable, List, Optional, Tuple, TypeVar, Union
from urllib.parse import urlparse
17

limm's avatar
limm committed
18
import numpy as np
19
import torch
20
from torch.utils.model_zoo import tqdm
21

limm's avatar
limm committed
22
from .._internally_replaced_utils import _download_file_from_remote_location, _is_remote_location_available
23

24
25
26
USER_AGENT = "pytorch/vision"


limm's avatar
limm committed
27
28
29
30
31
32
def _urlretrieve(url: str, filename: Union[str, pathlib.Path], chunk_size: int = 1024 * 32) -> None:
    with urllib.request.urlopen(urllib.request.Request(url, headers={"User-Agent": USER_AGENT})) as response:
        with open(filename, "wb") as fh, tqdm(total=response.length) as pbar:
            while chunk := response.read(chunk_size):
                fh.write(chunk)
                pbar.update(len(chunk))
33

soumith's avatar
soumith committed
34

limm's avatar
limm committed
35
36
37
38
39
40
41
42
43
44
def calculate_md5(fpath: Union[str, pathlib.Path], chunk_size: int = 1024 * 1024) -> str:
    # Setting the `usedforsecurity` flag does not change anything about the functionality, but indicates that we are
    # not using the MD5 checksum for cryptography. This enables its usage in restricted environments like FIPS. Without
    # it torchvision.datasets is unusable in these environments since we perform a MD5 check everywhere.
    if sys.version_info >= (3, 9):
        md5 = hashlib.md5(usedforsecurity=False)
    else:
        md5 = hashlib.md5()
    with open(fpath, "rb") as f:
        while chunk := f.read(chunk_size):
45
46
47
48
            md5.update(chunk)
    return md5.hexdigest()


limm's avatar
limm committed
49
def check_md5(fpath: Union[str, pathlib.Path], md5: str, **kwargs: Any) -> bool:
50
51
52
    return md5 == calculate_md5(fpath, **kwargs)


limm's avatar
limm committed
53
def check_integrity(fpath: Union[str, pathlib.Path], md5: Optional[str] = None) -> bool:
54
55
    if not os.path.isfile(fpath):
        return False
56
57
    if md5 is None:
        return True
58
    return check_md5(fpath, md5)
59
60


61
62
63
def _get_redirect_url(url: str, max_hops: int = 3) -> str:
    initial_url = url
    headers = {"Method": "HEAD", "User-Agent": USER_AGENT}
64

65
66
67
68
    for _ in range(max_hops + 1):
        with urllib.request.urlopen(urllib.request.Request(url, headers=headers)) as response:
            if response.url == url or response.url is None:
                return url
69

70
            url = response.url
71
    else:
72
73
74
        raise RecursionError(
            f"Request to {initial_url} exceeded {max_hops} redirects. The last redirect points to {url}."
        )
75
76


77
78
79
80
81
82
83
84
85
86
87
88
89
def _get_google_drive_file_id(url: str) -> Optional[str]:
    parts = urlparse(url)

    if re.match(r"(drive|docs)[.]google[.]com", parts.netloc) is None:
        return None

    match = re.match(r"/file/d/(?P<id>[^/]*)", parts.path)
    if match is None:
        return None

    return match.group("id")


90
def download_url(
limm's avatar
limm committed
91
92
93
94
95
    url: str,
    root: Union[str, pathlib.Path],
    filename: Optional[Union[str, pathlib.Path]] = None,
    md5: Optional[str] = None,
    max_redirect_hops: int = 3,
96
) -> None:
97
98
99
100
101
    """Download a file from a url and place it in root.

    Args:
        url (str): URL to download file from
        root (str): Directory to place downloaded file in
102
103
        filename (str, optional): Name to save the file under. If None, use the basename of the URL
        md5 (str, optional): MD5 checksum of the download. If None, do not check
104
        max_redirect_hops (int, optional): Maximum number of redirect hops allowed
105
    """
106
    root = os.path.expanduser(root)
107
108
    if not filename:
        filename = os.path.basename(url)
limm's avatar
limm committed
109
    fpath = os.fspath(os.path.join(root, filename))
110

111
    os.makedirs(root, exist_ok=True)
112

113
    # check if file is already present locally
114
    if check_integrity(fpath, md5):
limm's avatar
limm committed
115
        print("Using downloaded and verified file: " + fpath)
116
117
        return

118
    if _is_remote_location_available():
119
        _download_file_from_remote_location(fpath, url)
120
121
122
123
124
125
126
127
128
129
130
    else:
        # expand redirect chain if needed
        url = _get_redirect_url(url, max_hops=max_redirect_hops)

        # check if file is located on Google Drive
        file_id = _get_google_drive_file_id(url)
        if file_id is not None:
            return download_file_from_google_drive(file_id, root, filename, md5)

        # download the file
        try:
limm's avatar
limm committed
131
            print("Downloading " + url + " to " + fpath)
132
            _urlretrieve(url, fpath)
limm's avatar
limm committed
133
134
135
136
        except (urllib.error.URLError, OSError) as e:  # type: ignore[attr-defined]
            if url[:5] == "https":
                url = url.replace("https:", "http:")
                print("Failed download. Trying https -> http instead. Downloading " + url + " to " + fpath)
137
138
139
140
                _urlretrieve(url, fpath)
            else:
                raise e

141
142
143
    # check integrity of downloaded file
    if not check_integrity(fpath, md5):
        raise RuntimeError("File not found or corrupted.")
Sanyam Kapoor's avatar
Sanyam Kapoor committed
144
145


limm's avatar
limm committed
146
def list_dir(root: Union[str, pathlib.Path], prefix: bool = False) -> List[str]:
Sanyam Kapoor's avatar
Sanyam Kapoor committed
147
148
149
150
151
152
153
154
    """List all directories at a given root

    Args:
        root (str): Path to directory whose folders need to be listed
        prefix (bool, optional): If true, prepends the path to each result, otherwise
            only returns the name of the directories found
    """
    root = os.path.expanduser(root)
155
    directories = [p for p in os.listdir(root) if os.path.isdir(os.path.join(root, p))]
Sanyam Kapoor's avatar
Sanyam Kapoor committed
156
157
158
159
160
    if prefix is True:
        directories = [os.path.join(root, d) for d in directories]
    return directories


limm's avatar
limm committed
161
def list_files(root: Union[str, pathlib.Path], suffix: str, prefix: bool = False) -> List[str]:
Sanyam Kapoor's avatar
Sanyam Kapoor committed
162
163
164
165
166
167
168
169
170
171
    """List all files ending with a suffix at a given root

    Args:
        root (str): Path to directory whose folders need to be listed
        suffix (str or tuple): Suffix of the files to match, e.g. '.png' or ('.jpg', '.png').
            It uses the Python "str.endswith" method and is passed directly
        prefix (bool, optional): If true, prepends the path to each result, otherwise
            only returns the name of the files found
    """
    root = os.path.expanduser(root)
172
    files = [p for p in os.listdir(root) if os.path.isfile(os.path.join(root, p)) and p.endswith(suffix)]
Sanyam Kapoor's avatar
Sanyam Kapoor committed
173
174
175
    if prefix is True:
        files = [os.path.join(root, d) for d in files]
    return files
176
177


limm's avatar
limm committed
178
179
180
181
182
183
def download_file_from_google_drive(
    file_id: str,
    root: Union[str, pathlib.Path],
    filename: Optional[Union[str, pathlib.Path]] = None,
    md5: Optional[str] = None,
):
184
185
186
187
188
189
190
191
    """Download a Google Drive file from  and place it in root.

    Args:
        file_id (str): id of file to be downloaded
        root (str): Directory to place downloaded file in
        filename (str, optional): Name to save the file under. If None, use the id of the file.
        md5 (str, optional): MD5 checksum of the download. If None, do not check
    """
limm's avatar
limm committed
192
193
194
195
196
197
    try:
        import gdown
    except ModuleNotFoundError:
        raise RuntimeError(
            "To download files from GDrive, 'gdown' is required. You can install it with 'pip install gdown'."
        )
198
199
200
201

    root = os.path.expanduser(root)
    if not filename:
        filename = file_id
limm's avatar
limm committed
202
    fpath = os.fspath(os.path.join(root, filename))
203

204
    os.makedirs(root, exist_ok=True)
205

limm's avatar
limm committed
206
207
208
    if check_integrity(fpath, md5):
        print(f"Using downloaded {'and verified ' if md5 else ''}file: {fpath}")
        return
209

limm's avatar
limm committed
210
    gdown.download(id=file_id, output=fpath, quiet=False, user_agent=USER_AGENT)
211

limm's avatar
limm committed
212
213
    if not check_integrity(fpath, md5):
        raise RuntimeError("File not found or corrupted.")
214
215


limm's avatar
limm committed
216
217
def _extract_tar(
    from_path: Union[str, pathlib.Path], to_path: Union[str, pathlib.Path], compression: Optional[str]
218
) -> None:
219
220
    with tarfile.open(from_path, f"r:{compression[1:]}" if compression else "r") as tar:
        tar.extractall(to_path)
Ardalan's avatar
Ardalan committed
221
222


223
_ZIP_COMPRESSION_MAP: Dict[str, int] = {
limm's avatar
limm committed
224
    ".bz2": zipfile.ZIP_BZIP2,
225
226
    ".xz": zipfile.ZIP_LZMA,
}
227
228


limm's avatar
limm committed
229
230
231
def _extract_zip(
    from_path: Union[str, pathlib.Path], to_path: Union[str, pathlib.Path], compression: Optional[str]
) -> None:
232
233
234
235
    with zipfile.ZipFile(
        from_path, "r", compression=_ZIP_COMPRESSION_MAP[compression] if compression else zipfile.ZIP_STORED
    ) as zip:
        zip.extractall(to_path)
236
237


limm's avatar
limm committed
238
_ARCHIVE_EXTRACTORS: Dict[str, Callable[[Union[str, pathlib.Path], Union[str, pathlib.Path], Optional[str]], None]] = {
239
240
241
    ".tar": _extract_tar,
    ".zip": _extract_zip,
}
limm's avatar
limm committed
242
243
244
245
246
247
248
249
250
251
_COMPRESSED_FILE_OPENERS: Dict[str, Callable[..., IO]] = {
    ".bz2": bz2.open,
    ".gz": gzip.open,
    ".xz": lzma.open,
}
_FILE_TYPE_ALIASES: Dict[str, Tuple[Optional[str], Optional[str]]] = {
    ".tbz": (".tar", ".bz2"),
    ".tbz2": (".tar", ".bz2"),
    ".tgz": (".tar", ".gz"),
}
252

253

limm's avatar
limm committed
254
255
def _detect_file_type(file: Union[str, pathlib.Path]) -> Tuple[str, Optional[str], Optional[str]]:
    """Detect the archive type and/or compression of a file.
256

limm's avatar
limm committed
257
258
    Args:
        file (str): the filename
259

limm's avatar
limm committed
260
261
    Returns:
        (tuple): tuple of suffix, archive type, and compression
262

limm's avatar
limm committed
263
264
265
    Raises:
        RuntimeError: if file has no suffix or suffix is not supported
    """
266
267
268
269
270
    suffixes = pathlib.Path(file).suffixes
    if not suffixes:
        raise RuntimeError(
            f"File '{file}' has no suffixes that could be used to detect the archive type and compression."
        )
limm's avatar
limm committed
271
    suffix = suffixes[-1]
272
273

    # check if the suffix is a known alias
limm's avatar
limm committed
274
    if suffix in _FILE_TYPE_ALIASES:
275
276
277
        return (suffix, *_FILE_TYPE_ALIASES[suffix])

    # check if the suffix is an archive type
limm's avatar
limm committed
278
    if suffix in _ARCHIVE_EXTRACTORS:
279
280
281
        return suffix, suffix, None

    # check if the suffix is a compression
limm's avatar
limm committed
282
283
284
285
286
287
288
289
290
    if suffix in _COMPRESSED_FILE_OPENERS:
        # check for suffix hierarchy
        if len(suffixes) > 1:
            suffix2 = suffixes[-2]

            # check if the suffix2 is an archive type
            if suffix2 in _ARCHIVE_EXTRACTORS:
                return suffix2 + suffix, suffix2, suffix

291
292
        return suffix, None, suffix

limm's avatar
limm committed
293
294
    valid_suffixes = sorted(set(_FILE_TYPE_ALIASES) | set(_ARCHIVE_EXTRACTORS) | set(_COMPRESSED_FILE_OPENERS))
    raise RuntimeError(f"Unknown compression or archive type: '{suffix}'.\nKnown suffixes are: '{valid_suffixes}'.")
295
296


limm's avatar
limm committed
297
298
299
300
301
def _decompress(
    from_path: Union[str, pathlib.Path],
    to_path: Optional[Union[str, pathlib.Path]] = None,
    remove_finished: bool = False,
) -> pathlib.Path:
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
    r"""Decompress a file.

    The compression is automatically detected from the file name.

    Args:
        from_path (str): Path to the file to be decompressed.
        to_path (str): Path to the decompressed file. If omitted, ``from_path`` without compression extension is used.
        remove_finished (bool): If ``True``, remove the file after the extraction.

    Returns:
        (str): Path to the decompressed file.
    """
    suffix, archive_type, compression = _detect_file_type(from_path)
    if not compression:
        raise RuntimeError(f"Couldn't detect a compression from suffix {suffix}.")

318
    if to_path is None:
limm's avatar
limm committed
319
        to_path = pathlib.Path(os.fspath(from_path).replace(suffix, archive_type if archive_type is not None else ""))
320

321
322
323
324
325
    # We don't need to check for a missing key here, since this was already done in _detect_file_type()
    compressed_file_opener = _COMPRESSED_FILE_OPENERS[compression]

    with compressed_file_opener(from_path, "rb") as rfh, open(to_path, "wb") as wfh:
        wfh.write(rfh.read())
326
327

    if remove_finished:
328
329
        os.remove(from_path)

limm's avatar
limm committed
330
    return pathlib.Path(to_path)
331
332


limm's avatar
limm committed
333
334
335
336
337
def extract_archive(
    from_path: Union[str, pathlib.Path],
    to_path: Optional[Union[str, pathlib.Path]] = None,
    remove_finished: bool = False,
) -> Union[str, pathlib.Path]:
338
339
340
341
342
343
344
345
346
347
348
349
350
351
    """Extract an archive.

    The archive type and a possible compression is automatically detected from the file name. If the file is compressed
    but not an archive the call is dispatched to :func:`decompress`.

    Args:
        from_path (str): Path to the file to be extracted.
        to_path (str): Path to the directory the file will be extracted to. If omitted, the directory of the file is
            used.
        remove_finished (bool): If ``True``, remove the file after the extraction.

    Returns:
        (str): Path to the directory the file was extracted to.
    """
limm's avatar
limm committed
352
353
354
355
356
357
358

    def path_or_str(ret_path: pathlib.Path) -> Union[str, pathlib.Path]:
        if isinstance(from_path, str):
            return os.fspath(ret_path)
        else:
            return ret_path

359
360
361
362
363
    if to_path is None:
        to_path = os.path.dirname(from_path)

    suffix, archive_type, compression = _detect_file_type(from_path)
    if not archive_type:
limm's avatar
limm committed
364
        ret_path = _decompress(
365
366
367
368
            from_path,
            os.path.join(to_path, os.path.basename(from_path).replace(suffix, "")),
            remove_finished=remove_finished,
        )
limm's avatar
limm committed
369
        return path_or_str(ret_path)
370
371
372
373
374

    # We don't need to check for a missing key here, since this was already done in _detect_file_type()
    extractor = _ARCHIVE_EXTRACTORS[archive_type]

    extractor(from_path, to_path, compression)
limm's avatar
limm committed
375
376
    if remove_finished:
        os.remove(from_path)
377

limm's avatar
limm committed
378
    return path_or_str(pathlib.Path(to_path))
379

380

381
382
def download_and_extract_archive(
    url: str,
limm's avatar
limm committed
383
384
385
    download_root: Union[str, pathlib.Path],
    extract_root: Optional[Union[str, pathlib.Path]] = None,
    filename: Optional[Union[str, pathlib.Path]] = None,
386
387
388
    md5: Optional[str] = None,
    remove_finished: bool = False,
) -> None:
389
390
391
392
393
    download_root = os.path.expanduser(download_root)
    if extract_root is None:
        extract_root = download_root
    if not filename:
        filename = os.path.basename(url)
394

395
    download_url(url, download_root, filename, md5)
396

397
    archive = os.path.join(download_root, filename)
limm's avatar
limm committed
398
    print(f"Extracting {archive} to {extract_root}")
399
    extract_archive(archive, extract_root, remove_finished)
400
401


402
def iterable_to_str(iterable: Iterable) -> str:
403
404
405
    return "'" + "', '".join([str(item) for item in iterable]) + "'"


406
407
408
409
T = TypeVar("T", str, bytes)


def verify_str_arg(
limm's avatar
limm committed
410
411
412
413
    value: T,
    arg: Optional[str] = None,
    valid_values: Optional[Iterable[T]] = None,
    custom_msg: Optional[str] = None,
414
) -> T:
limm's avatar
limm committed
415
    if not isinstance(value, str):
416
417
418
419
420
421
422
423
424
425
426
427
428
429
        if arg is None:
            msg = "Expected type str, but got type {type}."
        else:
            msg = "Expected type str for argument {arg}, but got type {type}."
        msg = msg.format(type=type(value), arg=arg)
        raise ValueError(msg)

    if valid_values is None:
        return value

    if value not in valid_values:
        if custom_msg is not None:
            msg = custom_msg
        else:
limm's avatar
limm committed
430
431
            msg = "Unknown value '{value}' for argument {arg}. Valid values are {{{valid_values}}}."
            msg = msg.format(value=value, arg=arg, valid_values=iterable_to_str(valid_values))
432
433
434
        raise ValueError(msg)

    return value
limm's avatar
limm committed
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476


def _read_pfm(file_name: Union[str, pathlib.Path], slice_channels: int = 2) -> np.ndarray:
    """Read file in .pfm format. Might contain either 1 or 3 channels of data.

    Args:
        file_name (str): Path to the file.
        slice_channels (int): Number of channels to slice out of the file.
            Useful for reading different data formats stored in .pfm files: Optical Flows, Stereo Disparity Maps, etc.
    """

    with open(file_name, "rb") as f:
        header = f.readline().rstrip()
        if header not in [b"PF", b"Pf"]:
            raise ValueError("Invalid PFM file")

        dim_match = re.match(rb"^(\d+)\s(\d+)\s$", f.readline())
        if not dim_match:
            raise Exception("Malformed PFM header.")
        w, h = (int(dim) for dim in dim_match.groups())

        scale = float(f.readline().rstrip())
        if scale < 0:  # little-endian
            endian = "<"
            scale = -scale
        else:
            endian = ">"  # big-endian

        data = np.fromfile(f, dtype=endian + "f")

    pfm_channels = 3 if header == b"PF" else 1

    data = data.reshape(h, w, pfm_channels).transpose(2, 0, 1)
    data = np.flip(data, axis=1)  # flip on h dimension
    data = data[:slice_channels, :, :]
    return data.astype(np.float32)


def _flip_byte_order(t: torch.Tensor) -> torch.Tensor:
    return (
        t.contiguous().view(torch.uint8).view(*t.shape, t.element_size()).flip(-1).view(*t.shape[:-1], -1).view(t.dtype)
    )