ego_sample_cpu.cpp 4.37 KB
Newer Older
rusty1s's avatar
rusty1s committed
1
2
3
#include "ego_sample_cpu.h"

#include <ATen/Parallel.h>
rusty1s's avatar
rusty1s committed
4
#include <process.h>
rusty1s's avatar
rusty1s committed
5
6
7
8
9
10
11

#include "utils.h"

inline torch::Tensor vec2tensor(std::vector<int64_t> vec) {
  return torch::from_blob(vec.data(), {(int64_t)vec.size()}, at::kLong).clone();
}

rusty1s's avatar
rusty1s committed
12
// Returns `rowptr`, `col`, `n_id`, `e_id`, `ptr`, `root_n_id`
rusty1s's avatar
rusty1s committed
13
std::tuple<torch::Tensor, torch::Tensor, torch::Tensor, torch::Tensor,
rusty1s's avatar
rusty1s committed
14
           torch::Tensor, torch::Tensor>
rusty1s's avatar
rusty1s committed
15
16
17
18
ego_k_hop_sample_adj_cpu(torch::Tensor rowptr, torch::Tensor col,
                         torch::Tensor idx, int64_t depth,
                         int64_t num_neighbors, bool replace) {

rusty1s's avatar
rusty1s committed
19
20
  srand(time(NULL) + 1000 * getpid()); // Initialize random seed.

rusty1s's avatar
rusty1s committed
21
22
23
24
  std::vector<torch::Tensor> out_rowptrs(idx.numel() + 1);
  std::vector<torch::Tensor> out_cols(idx.numel());
  std::vector<torch::Tensor> out_n_ids(idx.numel());
  std::vector<torch::Tensor> out_e_ids(idx.numel());
rusty1s's avatar
rusty1s committed
25
  auto out_root_n_id = torch::empty({idx.numel()}, at::kLong);
rusty1s's avatar
rusty1s committed
26
27
28
29
30
  out_rowptrs[0] = torch::zeros({1}, at::kLong);

  auto rowptr_data = rowptr.data_ptr<int64_t>();
  auto col_data = col.data_ptr<int64_t>();
  auto idx_data = idx.data_ptr<int64_t>();
rusty1s's avatar
rusty1s committed
31
  auto out_root_n_id_data = out_root_n_id.data_ptr<int64_t>();
rusty1s's avatar
rusty1s committed
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78

  at::parallel_for(0, idx.numel(), 1, [&](int64_t begin, int64_t end) {
    int64_t row_start, row_end, row_count, vec_start, vec_end, v, w;
    for (int64_t g = begin; g < end; g++) {
      std::set<int64_t> n_id_set;
      n_id_set.insert(idx_data[g]);
      std::vector<int64_t> n_ids;
      n_ids.push_back(idx_data[g]);

      vec_start = 0, vec_end = n_ids.size();
      for (int64_t d = 0; d < depth; d++) {
        for (int64_t i = vec_start; i < vec_end; i++) {
          v = n_ids[i];
          row_start = rowptr_data[v], row_end = rowptr_data[v + 1];
          row_count = row_end - row_start;

          if (row_count <= num_neighbors) {
            for (int64_t e = row_start; e < row_end; e++) {
              w = col_data[e];
              n_id_set.insert(w);
              n_ids.push_back(w);
            }
          } else if (replace) {
            for (int64_t j = 0; j < num_neighbors; j++) {
              w = col_data[row_start + (rand() % row_count)];
              n_id_set.insert(w);
              n_ids.push_back(w);
            }
          } else {
            std::unordered_set<int64_t> perm;
            for (int64_t j = row_count - num_neighbors; j < row_count; j++) {
              if (!perm.insert(rand() % j).second) {
                perm.insert(j);
              }
            }
            for (int64_t j : perm) {
              w = col_data[row_start + j];
              n_id_set.insert(w);
              n_ids.push_back(w);
            }
          }
        }
        vec_start = vec_end;
        vec_end = n_ids.size();
      }

      n_ids.clear();
rusty1s's avatar
update  
rusty1s committed
79
80
      std::map<int64_t, int64_t> n_id_map;
      std::map<int64_t, int64_t>::iterator iter;
rusty1s's avatar
rusty1s committed
81
82
83
84
85
86
87
88

      int64_t i = 0;
      for (int64_t v : n_id_set) {
        n_ids.push_back(v);
        n_id_map[v] = i;
        i++;
      }

rusty1s's avatar
rusty1s committed
89
90
      out_root_n_id_data[g] = n_id_map[idx_data[g]];

rusty1s's avatar
rusty1s committed
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
      std::vector<int64_t> rowptrs, cols, e_ids;
      for (int64_t v : n_ids) {
        row_start = rowptr_data[v], row_end = rowptr_data[v + 1];
        for (int64_t e = row_start; e < row_end; e++) {
          w = col_data[e];
          iter = n_id_map.find(w);
          if (iter != n_id_map.end()) {
            cols.push_back(iter->second);
            e_ids.push_back(e);
          }
        }
        rowptrs.push_back(cols.size());
      }

      out_rowptrs[g + 1] = vec2tensor(rowptrs);
      out_cols[g] = vec2tensor(cols);
      out_n_ids[g] = vec2tensor(n_ids);
      out_e_ids[g] = vec2tensor(e_ids);
    }
  });

  auto out_ptr = torch::empty({idx.numel() + 1}, at::kLong);
  auto out_ptr_data = out_ptr.data_ptr<int64_t>();
  out_ptr_data[0] = 0;

  int64_t node_cumsum = 0, edge_cumsum = 0;
rusty1s's avatar
update  
rusty1s committed
117
118
119
120
121
122
  for (int64_t g = 1; g < idx.numel(); g++) {
    node_cumsum += out_n_ids[g - 1].numel();
    edge_cumsum += out_cols[g - 1].numel();
    out_rowptrs[g + 1].add_(edge_cumsum);
    out_cols[g].add_(node_cumsum);
    out_ptr_data[g] = node_cumsum;
rusty1s's avatar
rusty1s committed
123
    out_root_n_id_data[g] += node_cumsum;
rusty1s's avatar
rusty1s committed
124
125
126
127
128
129
  }
  node_cumsum += out_n_ids[idx.numel() - 1].numel();
  out_ptr_data[idx.numel()] = node_cumsum;

  return std::make_tuple(torch::cat(out_rowptrs, 0), torch::cat(out_cols, 0),
                         torch::cat(out_n_ids, 0), torch::cat(out_e_ids, 0),
rusty1s's avatar
rusty1s committed
130
                         out_ptr, out_root_n_id);
rusty1s's avatar
rusty1s committed
131
}