Commits · 9f5581781e405495b75558494fd0060ed67ca1a1 · OpenDAS / OpenFold

29 Mar, 2022 2 commits
- Fix DeepSpeed config builder · 9f558178
  Gustaf Ahdritz authored Mar 29, 2022
  
  9f558178
- Fix bug in DeepSpeed config · 47f1d66a
  Gustaf Ahdritz authored Mar 29, 2022
  
  47f1d66a
23 Mar, 2022 1 commit
- Fix bug in DRMSD function · 2e3404a1
  Gustaf Ahdritz authored Mar 23, 2022
  
  2e3404a1
21 Mar, 2022 1 commit
- Fix default in LR scheduler · 86a1f756
  Gustaf Ahdritz authored Mar 21, 2022
  
  86a1f756
20 Mar, 2022 2 commits
- Tweak training script. Install new LR scheduler · 3dcc01a7
  Gustaf Ahdritz authored Mar 20, 2022
  
  3dcc01a7
- Add DRMSD edge case · 72a971b0
  Gustaf Ahdritz authored Mar 20, 2022
  
  72a971b0
19 Mar, 2022 1 commit
- Merge pull request #90 from KiddoZhu/main · fbbb0479
  Gustaf Ahdritz authored Mar 18, 2022
```
Fix parameter restorage after loading EMA parameters 
```
  fbbb0479
18 Mar, 2022 1 commit
- fix parameter restorage in validation · 9a08acd8
  Zhaocheng Zhu authored Mar 18, 2022
  
  9a08acd8
14 Mar, 2022 1 commit
- Fix bug in mmCIF cache script · c83c42e8
  Gustaf Ahdritz authored Mar 14, 2022
  
  c83c42e8
10 Mar, 2022 1 commit
- Add custom LR scheduler · c113e110
  Gustaf Ahdritz authored Mar 09, 2022
  
  c113e110
23 Feb, 2022 1 commit
- Fix typo in training script · 4a613bbe
  Gustaf Ahdritz authored Feb 23, 2022
  
  4a613bbe
22 Feb, 2022 7 commits
- Fix another undefined reference in training script · ff29bddb
  Gustaf Ahdritz authored Feb 22, 2022
  
  ff29bddb
- Remove redundant parameter in training script · 8f9865c3
  Gustaf Ahdritz authored Feb 22, 2022
  
  8f9865c3
- Fix undefined reference in training script · fd95b577
  Gustaf Ahdritz authored Feb 22, 2022
  
  fd95b577
- Add reference to specific issue · e6263425
  Gustaf Ahdritz authored Feb 22, 2022
  
  e6263425
- One last adjustment to generate_chain_data_cache.py · 950b02f0
  Gustaf Ahdritz authored Feb 22, 2022
  
  950b02f0
- Adjust default behavior of generate_chain_data_cache.py · 39860f93
  Gustaf Ahdritz authored Feb 22, 2022
  
  39860f93
- Fix chain data cache script bug, improve logging · 4c7c30b1
  Gustaf Ahdritz authored Feb 22, 2022
  
  4c7c30b1
18 Feb, 2022 2 commits
- Fix typo · 61d004a2
  Gustaf Ahdritz authored Feb 17, 2022
  
  61d004a2
- Fix name of new trainer option · cf01fe0b
  Gustaf Ahdritz authored Feb 17, 2022
  
  cf01fe0b
17 Feb, 2022 3 commits
- Add model config preset option · 8451dc68
  Gustaf Ahdritz authored Feb 17, 2022
  
  8451dc68
- Adjust formatting in evoformer.py · 3a3717cc
  Gustaf Ahdritz authored Feb 17, 2022
  
  3a3717cc
- Fix bug in evoformer · 484ce867
  Gustaf Ahdritz authored Feb 17, 2022
  
  484ce867
14 Feb, 2022 1 commit
- Correct wording in README · 5eb86a78
  Gustaf Ahdritz authored Feb 14, 2022
  
  5eb86a78
13 Feb, 2022 1 commit
- Remove undefined reference · 49e21841
  Gustaf Ahdritz authored Feb 12, 2022
  
  49e21841
11 Feb, 2022 2 commits
- Improve logging · 50f72d45
  Gustaf Ahdritz authored Feb 10, 2022
  
  50f72d45
- Add missing function · a3e8ebbc
  Gustaf Ahdritz authored Feb 10, 2022
  
  a3e8ebbc
10 Feb, 2022 3 commits
- Change name of prot data cache · b9faee76
  Gustaf Ahdritz authored Feb 10, 2022
  
  b9faee76
- Correct description of mmCIF cache · 2864b7ca
  Gustaf Ahdritz authored Feb 09, 2022
  
  2864b7ca
- Add note about chain data cache script · 30f92c45
  Gustaf Ahdritz authored Feb 09, 2022
  
  30f92c45
08 Feb, 2022 5 commits
- Remove leftover if condition · c6e82f02
  Gustaf Ahdritz authored Feb 08, 2022
  
  c6e82f02
- Change config preset in training script · 60d3b198
  Gustaf Ahdritz authored Feb 08, 2022
  
  60d3b198
- Fix config presets · 16d75057
  Gustaf Ahdritz authored Feb 08, 2022
  
  16d75057
- Merge branch 'main' of github.com:aqlaboratory/openfold into main · 17015611
  Gustaf Ahdritz authored Feb 08, 2022
  
  17015611
- Remove unused option from config · 28a4c4d9
  Gustaf Ahdritz authored Feb 08, 2022
  
  28a4c4d9
06 Feb, 2022 3 commits
- Remove buggy DeepSpeed LR scheduler · 32c137e2
  Gustaf Ahdritz authored Feb 06, 2022
  
  32c137e2
- Add checkpointing to README sample command · 01367e36
  Gustaf Ahdritz authored Feb 06, 2022
  
  01367e36
- Update training script · fbec92cb
  Gustaf Ahdritz authored Feb 06, 2022
  
  fbec92cb
05 Feb, 2022 2 commits
- Fix bugs in chain data cache script · 70362e4b
  Gustaf Ahdritz authored Feb 05, 2022
  
  70362e4b
- Add chain data cache generator · 3b82ddb7
  Gustaf Ahdritz authored Feb 04, 2022
  
  3b82ddb7