Move parameter downloads

scripts/download_data.sh

@@ -39,13 +39,15 @@ fi
 
 SCRIPT_DIR="$(dirname "$(realpath "$0")")"
 
-echo "Downloading AlphaFold parameters..."
-bash "${SCRIPT_DIR}/download_alphafold_params.sh" "${DOWNLOAD_DIR}"
-
 echo "Downloading PDB70..."
 bash "${SCRIPT_DIR}/download_pdb70.sh" "${DOWNLOAD_DIR}"
 
 echo "Downloading PDB mmCIF files..."
 bash "${SCRIPT_DIR}/download_pdb_mmcif.sh" "${DOWNLOAD_DIR}"
 
+if [[ -d openfold/resources/params ]]; then
+    ln -s openfold/resources/params "${DOWNLOAD_DIR}/params"
+    ln -s openfold/resources/openfold_params "${DOWNLOAD_DIR}/params"
+fi
+
 echo "All data downloaded."

scripts/install_third_party_dependencies.sh

@@ -31,8 +31,11 @@ wget -q -P openfold/resources \
 mkdir -p tests/test_data/alphafold/common
 ln -rs openfold/resources/stereo_chemical_props.txt tests/test_data/alphafold/common
 
-# Download pretrained openfold weights
-scripts/download_alphafold_params.sh openfold/resources
+echo "Downloading OpenFold parameters..."
+bash scripts/download_openfold_params.sh openfold/resources
+
+echo "Downloading AlphaFold parameters..."
+bash scripts/download_alphafold_params.sh openfold/resources
 
 # Decompress test data
 gunzip tests/test_data/sample_feats.pickle.gz