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OpenDAS
OpenFold
Commits
e40900d8
Commit
e40900d8
authored
Oct 14, 2022
by
Sachin Kadyan
Browse files
Added dummy MSA generation for seq-emb mode.
- New method for generating dummy MSA features.
parent
21a88b6f
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openfold/data/data_pipeline.py
openfold/data/data_pipeline.py
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openfold/data/data_pipeline.py
View file @
e40900d8
...
...
@@ -260,6 +260,17 @@ def make_msa_features(
return
features
def
make_dummy_msa_feats
(
input_sequence
):
msas
=
[[
input_sequence
]]
deletion_matrices
=
[[[
0
for
_
in
input_sequence
]]]
msa_features
=
make_msa_features
(
msas
=
msas
,
deletion_matrices
=
deletion_matrices
,
)
return
msa_features
def
make_sequence_features_with_custom_template
(
sequence
:
str
,
mmcif_path
:
str
,
...
...
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