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OpenDAS
OpenFold
Commits
b45a91ba
Commit
b45a91ba
authored
Oct 02, 2023
by
Sachin Kadyan
Browse files
Limit the MSA distillation clusters to 1 in seq mode
parent
3f592307
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openfold/config.py
openfold/config.py
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openfold/config.py
View file @
b45a91ba
...
@@ -156,9 +156,11 @@ def model_config(
...
@@ -156,9 +156,11 @@ def model_config(
elif
name
==
"seqemb_initial_training"
:
elif
name
==
"seqemb_initial_training"
:
c
.
data
.
train
.
max_msa_clusters
=
1
c
.
data
.
train
.
max_msa_clusters
=
1
c
.
data
.
eval
.
max_msa_clusters
=
1
c
.
data
.
eval
.
max_msa_clusters
=
1
c
.
data
.
train
.
max_distillation_msa_clusters
=
1
elif
name
==
"seqemb_finetuning"
:
elif
name
==
"seqemb_finetuning"
:
c
.
data
.
train
.
max_msa_clusters
=
1
c
.
data
.
train
.
max_msa_clusters
=
1
c
.
data
.
eval
.
max_msa_clusters
=
1
c
.
data
.
eval
.
max_msa_clusters
=
1
c
.
data
.
train
.
max_distillation_msa_clusters
=
1
c
.
data
.
train
.
crop_size
=
384
c
.
data
.
train
.
crop_size
=
384
c
.
loss
.
violation
.
weight
=
1.
c
.
loss
.
violation
.
weight
=
1.
c
.
loss
.
experimentally_resolved
.
weight
=
0.01
c
.
loss
.
experimentally_resolved
.
weight
=
0.01
...
...
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