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OpenDAS
OpenFold
Commits
81ca652e
Unverified
Commit
81ca652e
authored
Jan 31, 2024
by
Jennifer Wei
Committed by
GitHub
Jan 31, 2024
Browse files
Update README.md
fixed a typo in the readme for soloseq params path
parent
40d9e7d7
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README.md
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81ca652e
...
@@ -351,7 +351,7 @@ python3 run_pretrained_openfold.py \
...
@@ -351,7 +351,7 @@ python3 run_pretrained_openfold.py \
--output_dir
./
\
--output_dir
./
\
--model_device
"cuda:0"
\
--model_device
"cuda:0"
\
--config_preset
"seq_model_esm1b_ptm"
\
--config_preset
"seq_model_esm1b_ptm"
\
--openfold_checkpoint_path
openfold/resources/openfold_params/seq_model_esm1b_ptm.pt
\
--openfold_checkpoint_path
openfold/resources/openfold_
soloseq_
params/seq_model_esm1b_ptm.pt
\
--uniref90_database_path
data/uniref90/uniref90.fasta
\
--uniref90_database_path
data/uniref90/uniref90.fasta
\
--pdb70_database_path
data/pdb70/pdb70
\
--pdb70_database_path
data/pdb70/pdb70
\
--jackhmmer_binary_path
lib/conda/envs/openfold_venv/bin/jackhmmer
\
--jackhmmer_binary_path
lib/conda/envs/openfold_venv/bin/jackhmmer
\
...
...
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