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OpenDAS
OpenFold
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72b89b59
Unverified
Commit
72b89b59
authored
Nov 22, 2021
by
Gustaf Ahdritz
Committed by
GitHub
Nov 22, 2021
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Note existence of config in README
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9329de4d
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@@ -92,6 +92,11 @@ a format recognized by the OpenFold parser. The resulting directory becomes the
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@@ -92,6 +92,11 @@ a format recognized by the OpenFold parser. The resulting directory becomes the
`alignment_dir`
used in subsequent steps. Use
`scripts/unpack_proteinnet.py`
to
`alignment_dir`
used in subsequent steps. Use
`scripts/unpack_proteinnet.py`
to
extract
`.core`
files from ProteinNet text files.
extract
`.core`
files from ProteinNet text files.
For both inference and training, the model's hyperparameters can be tuned from
`openfold/config.py`
. Of course, if you plan to perform inference using
DeepMind's pretrained parameters, you will only be able to make changes that
do not affect the shapes of model parameters.
### Inference
### Inference
To run inference on a sequence or multiple sequences using a set of DeepMind's
To run inference on a sequence or multiple sequences using a set of DeepMind's
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