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OpenDAS
OpenFold
Commits
67b35775
Commit
67b35775
authored
Apr 26, 2022
by
Gustaf Ahdritz
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Add FastFold link
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edb7d341
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67b35775
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@@ -26,9 +26,10 @@ OpenFold is equipped with an implementation of low-memory attention
(
[
Rabe & Staats 2021
](
https://arxiv.org/pdf/2112.05682.pdf
)
), which
enables inference on extremely long chains.
We've modified FastFold's custom CUDA kernels to support in-place attention
during inference and training. These use 4x and 5x less GPU memory than
equivalent FastFold and stock PyTorch implementations, respectively.
We've modified
[
FastFold
](
https://github.com/hpcaitech/FastFold
)
's custom CUDA
kernels to support in-place attention during inference and training. These use
4x and 5x less GPU memory than equivalent FastFold and stock PyTorch
implementations, respectively.
We also make available efficient scripts for generating alignments. We've
used them to generate millions of alignments that will be released alongside
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