Disable zero centering

openfold/data/templates.py

@@ -503,7 +503,7 @@ def _get_atom_positions(
     mmcif_object: mmcif_parsing.MmcifObject,
     auth_chain_id: str,
     max_ca_ca_distance: float,
-    _zero_center_positions: bool = True,
+    _zero_center_positions: bool = False,
 ) -> Tuple[np.ndarray, np.ndarray]:
     """Gets atom positions and mask from a list of Biopython Residues."""
     coords_with_mask = mmcif_parsing.get_atom_coords(
@@ -1045,6 +1045,7 @@ class TemplateHitFeaturizer:
         filtered = list(
             sorted(filtered, key=lambda x: x.sum_probs, reverse=True)
         )
+
         idx = list(range(len(filtered)))
         if(self._shuffle_top_k_prefiltered):
             stk = self._shuffle_top_k_prefiltered