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Commit 29864369 authored by Gustaf Ahdritz's avatar Gustaf Ahdritz
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Squeeze templates

parent 913903e0
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Showing with 2 additions and 2 deletions
openfold/model/model.py
View file @ 29864369
......@@ -138,7 +138,7 @@ class AlphaFold(nn.Module):
for i in range(n_templ):
idx = batch["template_aatype"].new_tensor(i)
single_template_feats = tensor_tree_map(
lambda t: torch.index_select(t, templ_dim, idx),
lambda t: torch.index_select(t, templ_dim, idx).squeeze(templ_dim),
batch,
)
......
openfold/model/template.py
View file @ 29864369
......@@ -448,7 +448,7 @@ def embed_templates_offload(
for i in range(n_templ):
idx = batch["template_aatype"].new_tensor(i)
single_template_feats = tensor_tree_map(
lambda t: torch.index_select(t, templ_dim, idx),
lambda t: torch.index_select(t, templ_dim, idx).squeeze(templ_dim),
batch,
)
......
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