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OpenDAS
OpenFold
Commits
226d6011
Commit
226d6011
authored
Jul 07, 2023
by
Geoffrey Yu
Browse files
hard code template_featurizer to be hmmsearch for now just to run the unittest
parent
31c976b5
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openfold/data/data_modules.py
openfold/data/data_modules.py
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openfold/data/data_modules.py
View file @
226d6011
...
...
@@ -151,7 +151,8 @@ class OpenFoldSingleDataset(torch.utils.data.Dataset):
chain
:
i
for
i
,
chain
in
enumerate
(
self
.
_chain_ids
)
}
template_featurizer
=
templates
.
TemplateHitFeaturizer
(
# changed template_featurizer to hmmsearch for now just to run the test
template_featurizer
=
templates
.
HmmsearchHitFeaturizer
(
mmcif_dir
=
template_mmcif_dir
,
max_template_date
=
max_template_date
,
max_hits
=
max_template_hits
,
...
...
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