"git@developer.sourcefind.cn:OpenDAS/openfold.git" did not exist on "57cb093ef396b8c7559d60505625baad4d731cef"
Commit 1c3d31bb authored by Gustaf Ahdritz's avatar Gustaf Ahdritz
Browse files

Add else branch to data module

parent 14cce39a
...@@ -170,13 +170,15 @@ class OpenFoldSingleDataset(torch.utils.data.Dataset): ...@@ -170,13 +170,15 @@ class OpenFoldSingleDataset(torch.utils.data.Dataset):
data = self.data_pipeline.process_core( data = self.data_pipeline.process_core(
path + ".core", alignment_dir path + ".core", alignment_dir
) )
else: elif(os.path.exists(path + ".pdb")):
data = self.data_pipeline.process_pdb( data = self.data_pipeline.process_pdb(
pdb_path=path + ".pdb", pdb_path=path + ".pdb",
alignment_dir=alignment_dir, alignment_dir=alignment_dir,
is_distillation=self.treat_pdb_as_distillation, is_distillation=self.treat_pdb_as_distillation,
chain_id=chain_id, chain_id=chain_id,
) )
else:
raise ValueError("Invalid file type")
else: else:
path = os.path.join(name, name + ".fasta") path = os.path.join(name, name + ".fasta")
data = self.data_pipeline.process_fasta( data = self.data_pipeline.process_fasta(
......
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