Unverified Commit 0ddf27a9 authored by Gustaf Ahdritz's avatar Gustaf Ahdritz Committed by GitHub
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Update README.md

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...@@ -8,7 +8,7 @@ A faithful PyTorch reproduction of DeepMind's ...@@ -8,7 +8,7 @@ A faithful PyTorch reproduction of DeepMind's
## Features ## Features
OpenFold carefully reproduces (almost) all of the features of the original open OpenFold carefully reproduces (almost) all of the features of the original open
source inference code (v.2.0.1). The sole exception is model ensembling, which source inference code (v2.0.1). The sole exception is model ensembling, which
fared poorly in DeepMind's own ablation testing and is being phased out in future fared poorly in DeepMind's own ablation testing and is being phased out in future
DeepMind experiments. It is omitted here for the sake of reducing clutter. In DeepMind experiments. It is omitted here for the sake of reducing clutter. In
cases where the *Nature* paper differs from the source, we always defer to the cases where the *Nature* paper differs from the source, we always defer to the
...@@ -217,7 +217,7 @@ The script is a thin wrapper around Python's `unittest` suite, and recognizes ...@@ -217,7 +217,7 @@ The script is a thin wrapper around Python's `unittest` suite, and recognizes
scripts/run_unit_tests.sh -v tests.test_model scripts/run_unit_tests.sh -v tests.test_model
``` ```
Certain tests require that AlphaFold (v. 2.0.1) be installed in the same Python Certain tests require that AlphaFold (v2.0.1) be installed in the same Python
environment. These run components of AlphaFold and OpenFold side by side and environment. These run components of AlphaFold and OpenFold side by side and
ensure that output activations are adequately similar. For most modules, we ensure that output activations are adequately similar. For most modules, we
target a maximum difference of `1e-4`. target a maximum difference of `1e-4`.
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