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Commits
04410d5e
Commit
04410d5e
authored
May 05, 2024
by
Lukas Jarosch
Browse files
Improve import formatting
parent
78b97065
Changes
1
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scripts/alignment_data_to_fasta.py
scripts/alignment_data_to_fasta.py
+3
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scripts/alignment_data_to_fasta.py
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04410d5e
...
@@ -3,12 +3,13 @@ This script generates a FASTA file for all chains in an alignment directory or
...
@@ -3,12 +3,13 @@ This script generates a FASTA file for all chains in an alignment directory or
alignment DB.
alignment DB.
"""
"""
from
concurrent.futures
import
ThreadPoolExecutor
,
as_completed
import
json
import
json
from
argparse
import
ArgumentParser
from
concurrent.futures
import
ThreadPoolExecutor
,
as_completed
from
pathlib
import
Path
from
pathlib
import
Path
from
typing
import
Optional
from
typing
import
Optional
from
tqdm
import
tqdm
from
tqdm
import
tqdm
from
argparse
import
ArgumentParser
def
chain_dir_to_fasta
(
dir
:
Path
)
->
str
:
def
chain_dir_to_fasta
(
dir
:
Path
)
->
str
:
...
...
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