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mgnify_hits.sto 3.99 KB
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Dingquan Yu's avatar
added test alignment files for dataloader unittest  
Dingquan Yu committed
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# STOCKHOLM 1.0

#=GS MGYP000613015979/52-138  DE [subseq from] PL=11 UP=0 BIOMES=0000000011000
#=GS MGYP000356782790/15-100  DE [subseq from] PL=01 UP=0 BIOMES=1000000000000
#=GS MGYP000745946800/67-150  DE [subseq from] PL=00 UP=0 BIOMES=0000000011000
#=GS MGYP000365627167/34-120  DE [subseq from] PL=01 UP=0 BIOMES=1000000000000
#=GS MGYP000326981611/4-88    DE [subseq from] PL=00 UP=0 BIOMES=0000000011000
#=GS MGYP000438079158/44-95   DE [subseq from] PL=10 UP=0 BIOMES=0000000010100
#=GS MGYP000660499351/22-69   DE [subseq from] PL=00 UP=0 BIOMES=1000000000000
#=GS MGYP000054740637/2-50    DE [subseq from] PL=00 UP=0 BIOMES=0000000010100
#=GS MGYP000111717601/1-44    DE [subseq from] PL=00 UP=0 BIOMES=0000000011000
#=GS MGYP000888755554/1-44    DE [subseq from] PL=00 UP=0 BIOMES=0000000011000
#=GS MGYP000294730968/1-44    DE [subseq from] PL=00 UP=0 BIOMES=0000000010100
#=GS MGYP000492638681/46-75   DE [subseq from] PL=00 UP=0 BIOMES=0000000000001
#=GS MGYP001120896613/151-179 DE [subseq from] PL=01 UP=0 BIOMES=0101000000000
#=GS MGYP000299282490/49-75   DE [subseq from] PL=00 UP=0 BIOMES=0000101000000
#=GS MGYP000665431927/41-61   DE [subseq from] PL=10 UP=0 BIOMES=0110000000000
#=GS MGYP000236921234/89-111  DE [subseq from] PL=01 UP=0 BIOMES=0110000000000
#=GS MGYP000139113544/297-357 DE [subseq from] PL=01 UP=0 BIOMES=0000000011000
#=GS MGYP000139113544/476-542 DE [subseq from] PL=01 UP=0 BIOMES=0000000011000

query                            GSSGSSGMEGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAHLSLELQRDSHMKQLLLIQERWKRA-KREERLKAHSGPSSG
MGYP000613015979/52-138          -----KVMEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMKQLLLIQERWKRA-QREERLKAQQ-----
MGYP000356782790/15-100          ------VMEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMKQLLLIQERWKRA-QGEARLKAQQ-----
MGYP000745946800/67-150          ------VMEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQARLSLELQRDSHMKQLLLIQERWKRA-QREERLKA-------
MGYP000365627167/34-120          -----EVMEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAVYLSEAMKLTQSKQAHLSLELQRDSHMKQLLLIQERWKRA-QGEARLKAQQ-----
MGYP000326981611/4-88            -------MEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQARLSLELQRDSHMKQLLLIQERWKRP-QHEERLKAQQ-----
MGYP000438079158/44-95           -----EVMEGPLNLAHQQSRRADHLLAAGKYEEAISCHKKAAVYLSEAMKLTQSEQV-----------------------------------------
MGYP000660499351/22-69           --------NGSLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLYEAMKLTQSEQ------------------------------------------
MGYP000054740637/2-50            -------------------------------------------YLSEAMKLTQSKQAHLSLELQRDSHMKQLLLIQERWKRA-QGEARLKAQQ-----
MGYP000111717601/1-44            ------------------------------------------------MKLTQSEQAHLSLELQRDSHMKQLLLIQERWKRA-QREERLKAQQ-----
MGYP000888755554/1-44            ------------------------------------------------MKLTQSEQARLSLELQRDSHMKQLLLIQERWKRA-QREERLKAQQ-----
MGYP000294730968/1-44            ------------------------------------------------MKLTQSKQAHLSLELQRDSHMKQLLLIQERWKRP-QHEERLKAQQ-----
MGYP000492638681/46-75           ------------NNAKFYSRLAATLSALEKYEEAIDCYQKAI--------------------------------------------------------
MGYP001120896613/151-179         -------------AAHVWNSKGDALANLGKYEEAIECYDKAI--------------------------------------------------------
MGYP000299282490/49-75           ---------------YLLNKKGDNLSRLGKFEEAIECYDKAI--------------------------------------------------------
MGYP000665431927/41-61           -----------------------ILQALGKYEEAIACYDKVITF------------------------------------------------------
MGYP000236921234/89-111          ---------------------GKILEALGKYEEAIACYDKVITF------------------------------------------------------
MGYP000139113544/297-357         ----------------REYQKALKLMTDEKYEEAIKAFEVLNNYSDSATKISECNTAILEREYQKAL--K--LMMDEKYEE-----------------
MGYP000139113544/476-542         -------------------QKATRLMEDEKYEDAIQAFEALNSYSDSTTKISECKTAILEKEYQKA--LK--LMMDEKYEEAIKAFEALN--------
#=GC RF                          xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx
//