environment.yml

name: openfold_venv
channels:
  - conda-forge
  - bioconda
dependencies:
  - openmm=7.7
  - pdbfixer
  - ml-collections 
  - PyYAML==5.4.1
  - requests
  - typing-extensions
  - bioconda::hmmer==3.3.2
  - bioconda::hhsuite==3.3.0
  - bioconda::kalign2==2.04
  - pip:
      - biopython==1.79
      - dm-tree==0.1.6