environment.yml

name: openfold_venv
channels:
  - conda-forge
  - bioconda
dependencies:
  - conda-forge::openmm=7.5.1
  - conda-forge::pdbfixer
  - bioconda::hmmer==3.3.2
  - bioconda::hhsuite==3.3.0
  - bioconda::kalign2==2.04
  - pip:
      - biopython==1.79
      - dm-tree==0.1.6
      - ml-collections==0.1.0
      - PyYAML==5.4.1
      - requests==2.26.0
      - typing-extensions==3.10.0.2