Commit c785b534 authored by zhuww's avatar zhuww
Browse files

check version and modify alphafold.py

parent e5d72d41
...@@ -427,7 +427,9 @@ class AlphaFold(nn.Module): ...@@ -427,7 +427,9 @@ class AlphaFold(nn.Module):
z_prev = z z_prev = z
# [*, N, 3] # [*, N, 3]
x_prev = outputs["final_atom_positions"] x_prev = atom14_to_atom37(
outputs_sm["positions"][-1], feats
)
if no_iter != 3: if no_iter != 3:
return None, m_1_prev, z_prev, x_prev return None, m_1_prev, z_prev, x_prev
......
...@@ -411,7 +411,7 @@ def inference_monomer_model(args): ...@@ -411,7 +411,7 @@ def inference_monomer_model(args):
batch = processed_feature_dict batch = processed_feature_dict
manager = mp.Manager() manager = mp.Manager()
result_q = manager.Queue() result_q = manager.Queue()
torch.multiprocessing.spawn(inference_model, nprocs=args.gpus, args=(args.gpus, result_q, batch, args)) torch.multiprocessing.spawn(inference_model, nprocs=args.gpus, args=(args.gpus, result_q, batch, args))
out = result_q.get() out = result_q.get()
......
...@@ -118,7 +118,7 @@ def get_version_add(sha: Optional[str] = None) -> str: ...@@ -118,7 +118,7 @@ def get_version_add(sha: Optional[str] = None) -> str:
version += "." + version_dtk version += "." + version_dtk
with open(add_version_path, encoding="utf-8", mode="w") as file: with open(add_version_path, encoding="utf-8", mode="w") as file:
file.write("__version__='0.2.0'+'+{}'\n".format(version)) file.write("__version__='0.2.1'+'+{}'\n".format(version))
file.close() file.close()
...@@ -132,7 +132,6 @@ def get_version(): ...@@ -132,7 +132,6 @@ def get_version():
setup( setup(
name='fastfold', name='fastfold',
#version='0.2.0',
version=get_version(), version=get_version(),
packages=find_packages(exclude=( packages=find_packages(exclude=(
'assets', 'assets',
......
__version__ = "0.2.0" __version__ = "0.2.1"
\ No newline at end of file \ No newline at end of file
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