Skip to content

GitLab

Unverified Commit 9ab281fe authored by Fazzie-Maqianli's avatar Fazzie-Maqianli Committed by GitHub
Browse files

fix data workflow name bug (#68)

parent 43e9bd0f
Hide whitespace changes
Inline Side-by-side
Showing with 3 additions and 3 deletions
fastfold/workflow/template/fastfold_data_workflow.py
View file @ 9ab281fe
...@@ -161,15 +161,15 @@ class FastFoldDataWorkFlow: ...@@ -161,15 +161,15 @@ class FastFoldDataWorkFlow:
# Run HHBlits on BFD # Run HHBlits on BFD
bfd_out_path = os.path.join(alignment_dir, "bfd_uniclust_hits.a3m") bfd_out_path = os.path.join(alignment_dir, "bfd_uniclust_hits.a3m")
# generate workflow for STEP4 # generate workflow for STEP4
bdf_node = self.hhblits_bfd_factory.gen_node(fasta_path, bfd_out_path) bfd_node = self.hhblits_bfd_factory.gen_node(fasta_path, bfd_out_path)
else: else:
# Run Jackhmmer on small_bfd # Run Jackhmmer on small_bfd
bfd_out_path = os.path.join(alignment_dir, "bfd_uniclust_hits.a3m") bfd_out_path = os.path.join(alignment_dir, "bfd_uniclust_hits.a3m")
# generate workflow for STEP4_2 # generate workflow for STEP4_2
bdf_node = self.jackhmmer_small_bfd_factory.gen_node(fasta_path, bfd_out_path) bfd_node = self.jackhmmer_small_bfd_factory.gen_node(fasta_path, bfd_out_path)
# run workflow # run workflow
batch_run(workflow_id=workflow_id, dags=[hhs_node, mgnify_node, bdf_node]) batch_run(workflow_id=workflow_id, dags=[hhs_node, mgnify_node, bfd_node])
return return
\ No newline at end of file
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment