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Unverified Commit 03ff54e5 authored by LuGY's avatar LuGY Committed by GitHub
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remove pre_built wheel of installation and update readme (#154)

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README.md
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...@@ -53,20 +53,13 @@ python setup.py install ...@@ -53,20 +53,13 @@ python setup.py install
To leverage the power of FastFold, we recommend you to install [Triton](https://github.com/openai/triton). To leverage the power of FastFold, we recommend you to install [Triton](https://github.com/openai/triton).
**NOTE: Triron needs CUDA 11.4 to run.**
```bash ```bash
pip install triton==2.0.0.dev20221005 pip install -U --pre triton
``` ```
### Using PyPi
You can download FastFold with pre-built CUDA extensions.
Warning, only stable versions available.
```shell
pip install fastfold -f https://release.colossalai.org/fastfold
```
## Use Docker ## Use Docker
### Build On Your Own ### Build On Your Own
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docker/Dockerfile
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...@@ -6,11 +6,7 @@ RUN conda install openmm=7.7.0 pdbfixer -c conda-forge -y \ ...@@ -6,11 +6,7 @@ RUN conda install openmm=7.7.0 pdbfixer -c conda-forge -y \
RUN pip install biopython==1.79 dm-tree==0.1.6 ml-collections==0.1.0 \ RUN pip install biopython==1.79 dm-tree==0.1.6 ml-collections==0.1.0 \
scipy==1.7.1 ray pyarrow pandas einops scipy==1.7.1 ray pyarrow pandas einops
RUN pip install colossalai==0.1.10+torch1.12cu11.3 -f https://release.colossalai.org RUN pip install colossalai
RUN git clone https://github.com/openai/triton.git ~/triton \
&& cd ~/triton/python \
&& pip install -e .
Run git clone https://github.com/hpcaitech/FastFold.git \ Run git clone https://github.com/hpcaitech/FastFold.git \
&& cd ./FastFold \ && cd ./FastFold \
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