"...gpu/git@developer.sourcefind.cn:gaoqiong/migraphx.git" did not exist on "8ff4b151fff25bcd03cc8ccf4bb63203801ea967"
Dockerfile 405 Bytes
Newer Older
LuGY's avatar
LuGY committed
1
FROM hpcaitech/colossalai:0.1.8
2

LuGY's avatar
LuGY committed
3
4
RUN conda install openmm=7.7.0 pdbfixer -c conda-forge -y \
 && conda install hmmer==3.3.2 hhsuite=3.3.0 kalign2=2.04 -c bioconda -y
5

LuGY's avatar
LuGY committed
6
7
RUN pip install biopython==1.79 dm-tree==0.1.6 ml-collections==0.1.0 \
scipy==1.7.1 ray pyarrow pandas einops
8
9
10
11
12

# prepare environment
Run git clone https://github.com/hpcaitech/FastFold.git\
 && cd ./FastFold \
 && python setup.py install