"src/vscode:/vscode.git/clone" did not exist on "2c60f7d14e5297a61301c8bb2698717c244d3e43"
  1. 15 Jun, 2020 1 commit
  2. 22 May, 2020 1 commit
    • Chao Ma's avatar
      [RPC] New RPC infrastructure. (#1549) · 3e696922
      Chao Ma authored
      
      
      * WIP: rpc components
      
      * client & server
      
      * move network package to rpc
      
      * fix include
      
      * fix compile
      
      * c api
      
      * wip: test
      
      * add basic tests
      
      * missing file
      
      * [RPC] Zero copy serializer (#1517)
      
      * zerocopy serialization
      
      * add test for HeteroGraph
      
      * fix lint
      
      * remove unnecessary codes
      
      * add comment
      
      * lint
      
      * lint
      
      * disable pylint for now
      
      * add include for win
      
      * windows guard
      
      * lint
      
      * lint
      
      * skip test on windows
      
      * refactor
      
      * add comment
      
      * fix
      
      * comment
      
      * 1111
      
      * fix
      
      * Update Jenkinsfile
      
      * [RPC] Implementation of RPC infra (#1544)
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * remove client.cc and server.cc
      
      * fix lint
      
      * update
      
      * update
      
      * fix linr
      
      * update
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update test
      
      * update
      
      * update test
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update comment
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      Co-authored-by: default avatarMinjie Wang <wmjlyjemaine@gmail.com>
      Co-authored-by: default avatarJinjing Zhou <VoVAllen@users.noreply.github.com>
      3e696922
  3. 30 Mar, 2020 1 commit
  4. 07 Mar, 2020 1 commit
  5. 05 Mar, 2020 1 commit
  6. 02 Mar, 2020 1 commit
    • Minjie Wang's avatar
      [Feature] Improve sampling speed; Better pickle/unpickle; other fixes (#1299) · 5dd35580
      Minjie Wang authored
      * improve performance of sample_neighbors
      
      * some more improve
      
      * test script
      
      * benchmarks
      
      * multi process
      
      * update more tests
      
      * WIP
      
      * adding two API for state saving
      
      * add create from state
      
      * upd test
      
      * missing file
      
      * wip: pickle/unpickle
      
      * more c apis
      
      * find the problem of empty data array
      
      * add null array; pickling speed is bad
      
      * still bad perf
      
      * still bad perf
      
      * wip
      
      * fix the pickle speed test; now everything looks good
      
      * minor fix
      
      * bugfix
      
      * some lint fix
      
      * address comments
      
      * more fix
      
      * fix lint
      
      * add utest for random.choice
      
      * add utest for dgl.rand_graph
      
      * fix cpp utests
      
      * try fix ci
      
      * fix bug in TF backend
      
      * upd choice docstring
      
      * address comments
      
      * upd
      
      * try fix compile
      
      * add comment
      5dd35580
  7. 28 Feb, 2020 1 commit
    • Quan (Andy) Gan's avatar
      [Feature] PinSAGE sampler (#1249) · c3a33407
      Quan (Andy) Gan authored
      
      
      * [WIP] PinSAGE operators
      
      * moved the edge remapping mess into C
      
      * some docstrings
      
      * lint
      
      * lint x2
      
      * lint x3
      
      * skip gpu test on topk
      
      * extend pinsage to any metapath
      
      * lint x4
      
      * addresses #1265
      
      * add always_preserve (fixes #1266) and fix a silly bug
      
      * disable gpu test on compaction
      
      * lint
      
      * fix a horrible bug and add more tests
      
      * lint
      
      * addresses comments
      
      * lint
      
      * bugfix
      
      * addresses comments
      Co-authored-by: default avatarMinjie Wang <minjie.wang@nyu.edu>
      c3a33407
  8. 11 Sep, 2019 1 commit
  9. 23 Aug, 2019 1 commit
    • Quan (Andy) Gan's avatar
      [Hetero][RFC] Heterogeneous graph Python interfaces & Message Passing (#752) · 52d4535b
      Quan (Andy) Gan authored
      * moving heterograph index to another file
      
      * node view
      
      * python interfaces
      
      * heterograph init
      
      * bug fixes
      
      * docstring for readonly
      
      * more docstring
      
      * unit tests & lint
      
      * oops
      
      * oops x2
      
      * removed node/edge addition
      
      * addressed comments
      
      * lint
      
      * rw on frames with one node/edge type
      
      * homograph with underlying heterograph demo
      
      * view is not necessary
      
      * bugfix
      
      * replace
      
      * scheduler, builtins not working yet
      
      * moving bipartite.h to header
      
      * moving back bipartite to bipartite.h
      
      * oops
      
      * asbits and copyto for bipartite
      
      * tested update_all and send_and_recv
      
      * lightweight node & edge type retrieval
      
      * oops
      
      * sorry
      
      * removing obsolete code
      
      * oops
      
      * lint
      
      * various bug fixes & more tests
      
      * UDF tests
      
      * multiple type number_of_nodes and number_of_edges
      
      * docstring fixes
      
      * more tests
      
      * going for dict in initialization
      
      * lint
      
      * updated api as per discussions
      
      * lint
      
      * bug
      
      * bugfix
      
      * moving back bipartite impl to cc
      
      * note on views
      
      * fix
      52d4535b
  10. 27 Jul, 2019 1 commit
    • Minjie Wang's avatar
      [Hetero] Heterograph C++ implementation; Bipartite and Python wrapper (#725) · 7ad663c3
      Minjie Wang authored
      * finish bipartite graph implementation; compiled
      
      * finished heterograph implementation; compiled
      
      * WIP: apis
      
      * C API codes
      
      * compiled
      
      * WIP: python
      
      * HeteroGraphIndex
      
      * WIP: test
      
      * add DGLContext support in ffi
      
      * fix bug in has edge
      
      * unittests except edge subgraph
      
      * edge subgraph
      
      * fix lint
      
      * address comments
      
      * poke ci
      
      * try fix
      
      * fix msvc
      7ad663c3
  11. 23 Jul, 2019 1 commit
    • Minjie Wang's avatar
      [Refactor] Use object system for all CAPIs (#716) · 67dc1197
      Minjie Wang authored
      * WIP: using object system for graph
      
      * c++ side refactoring done; compiled
      
      * remove stale apis
      
      * fix bug in DGLGraphCreate; passed test_graph.py
      
      * fix bug in python modify; passed utest for pytorch/cpu
      
      * fix lint
      
      * address comments
      67dc1197
  12. 17 Jul, 2019 1 commit
    • Minjie Wang's avatar
      [Refactor] Separating graph and sparse matrix operations (#699) · b0d9e7aa
      Minjie Wang authored
      * WIP: array refactoring
      
      * WIP: implementation
      
      * wip
      
      * most csr part
      
      * WIP: on coo
      
      * WIP: coo
      
      * finish refactoring immutable graph
      
      * compiled
      
      * fix undefined ndarray copy bug; add COOToCSR when coo has no data array
      
      * fix bug in COOToCSR
      
      * fix bug in CSR constructor
      
      * fix bug in in_edges(vid)
      
      * fix OutEdges bug
      
      * pass test_graph
      
      * pass test_graph
      
      * fix bug in CSR constructor
      
      * fix bug in CSR constructor
      
      * fix bug in CSR constructor
      
      * fix stupid bug
      
      * pass gpu test
      
      * remove debug printout
      
      * fix lint
      
      * rm biparate grpah
      
      * fix lint
      
      * address comments
      
      * fix bug in Clone
      
      * cpp utests
      b0d9e7aa
  13. 07 Jun, 2019 1 commit
  14. 06 Jun, 2019 1 commit
    • Lingfan Yu's avatar
      [Feature][Kernel] DGL kernel support (#596) · 653428bd
      Lingfan Yu authored
      * [Kernel] Minigun integration and fused kernel support (#519)
      
      * kernel interface
      
      * add minigun
      
      * Add cuda build
      
      * functors
      
      * working on binary elewise
      
      * binary reduce
      
      * change kernel interface
      
      * WIP
      
      * wip
      
      * fix minigun
      
      * compile
      
      * binary reduce kernels
      
      * compile
      
      * simple test passed
      
      * more reducers
      
      * fix thrust problem
      
      * fix cmake
      
      * fix cmake; add proper guard for atomic
      
      * WIP: bcast
      
      * WIP
      
      * bcast kernels
      
      * update to new minigun pass-by-value practice
      
      * broadcasting dim
      
      * add copy src and copy edge
      
      * fix linking
      
      * fix none array problem
      
      * fix copy edge
      
      * add device_type and device_id to backend operator
      
      * cache csr adj, remove cache for adjmat and incmat
      
      * custom ops in backend and pytorch impl
      
      * change dgl-mg kernel python interface
      
      * add id_mapping var
      
      * clean up plus v2e spmv schedule
      
      * spmv schedule & clean up fall back
      
      * symbolic message and reduce func, remove bundle func
      
      * new executors
      
      * new backend interface for dgl kernels and pytorch impl
      
      * minor fix
      
      * fix
      
      * fix docstring, comments, func names
      
      * nodeflow
      
      * fix message id mapping and bugs...
      
      * pytorch test case & fix
      
      * backward binary reduce
      
      * fix bug
      
      * WIP: cusparse
      
      * change to int32 csr for cusparse workaround
      
      * disable cusparse
      
      * change back to int64
      
      * broadcasting backward
      
      * cusparse; WIP: add rev_csr
      
      * unit test for kernels
      
      * pytorch backward with dgl kernel
      
      * edge softmax
      
      * fix backward
      
      * improve softmax
      
      * cache edge on device
      
      * cache mappings on device
      
      * fix partial forward code
      
      * cusparse done
      
      * copy_src_sum with cusparse
      
      * rm id getter
      
      * reduce grad for broadcast
      
      * copy edge reduce backward
      
      * kernel unit test for broadcasting
      
      * full kernel unit test
      
      * add cpu kernels
      
      * edge softmax unit test
      
      * missing ref
      
      * fix compile and small bugs
      
      * fix bug in bcast
      
      * Add backward both
      
      * fix torch utests
      
      * expose infershape
      
      * create out tensor in python
      
      * fix c++ lint
      
      * [Kernel] Add GPU utest and kernel utest (#524)
      
      * fix gpu utest
      
      * cuda utest runnable
      
      * temp disable test nodeflow; unified test for kernel
      
      * cuda test kernel done
      
      * [Kernel] Update kernel branch (#550)
      
      * [Model] add multiprocessing training with sampling. (#484)
      
      * reorganize sampling code.
      
      * add multi-process training.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * add new API in graph store.
      
      * update barrier impl.
      
      * support both local and distributed training.
      
      * fix multiprocess train.
      
      * fix.
      
      * fix barrier.
      
      * add script for loading data.
      
      * multiprocessing sampling.
      
      * accel training.
      
      * replace pull with spmv for speedup.
      
      * nodeflow copy from parent with context.
      
      * enable GPU.
      
      * fix a bug in graph store.
      
      * enable multi-GPU training.
      
      * fix lint.
      
      * add comments.
      
      * rename to run_store_server.py
      
      * fix gcn_cv.
      
      * fix a minor bug in sampler.
      
      * handle error better in graph store.
      
      * improve graphsage_cv for distributed mode.
      
      * update README.
      
      * fix.
      
      * update.
      
      * [Tutorial] add sampling tutorial. (#522)
      
      * add sampling tutorial.
      
      * add readme
      
      * update author list.
      
      * fix indent in the code.
      
      * rename the file.
      
      * update tutorial.
      
      * fix the last API.
      
      * update image.
      
      * [BUGFIX] fix the problems in the sampling tutorial. (#523)
      
      * add index.
      
      * update.
      
      * update tutorial.
      
      * fix gpu utest
      
      * cuda utest runnable
      
      * temp disable test nodeflow; unified test for kernel
      
      * cuda test kernel done
      
      * Fixing typo in JTNN after interface change (#536)
      
      * [BugFix] Fix getting src and dst id of ALL edges in NodeFlow.apply_block (#515)
      
      * [Bug Fix] Fix inplace op at backend (#546)
      
      * Fix inplace operation
      
      * fix line seprator
      
      * [Feature] Add batch and unbatch for immutable graph (#539)
      
      * Add batch and unbatch for immutable graph
      
      * fix line seprator
      
      * fix lintr
      
      * remove unnecessary include
      
      * fix code review
      
      * [BUGFix] Improve multi-processing training (#526)
      
      * fix.
      
      * add comment.
      
      * remove.
      
      * temp fix.
      
      * initialize for shared memory.
      
      * fix graphsage.
      
      * fix gcn.
      
      * add more unit tests.
      
      * add more tests.
      
      * avoid creating shared-memory exclusively.
      
      * redefine remote initializer.
      
      * improve initializer.
      
      * fix unit test.
      
      * fix lint.
      
      * fix lint.
      
      * initialize data in the graph store server properly.
      
      * fix test.
      
      * fix test.
      
      * fix test.
      
      * small fix.
      
      * add comments.
      
      * cleanup server.
      
      * test graph store with a random port.
      
      * print.
      
      * print to stderr.
      
      * test1
      
      * test2
      
      * remove comment.
      
      * adjust the initializer signature.
      
      * [API] update graph store API. (#549)
      
      * add init_ndata and init_edata in DGLGraph.
      
      * adjust SharedMemoryGraph API.
      
      * print warning.
      
      * fix comment.
      
      * update example
      
      * fix.
      
      * fix examples.
      
      * add unit tests.
      
      * add comments.
      
      * [Refactor] Immutable graph index (#543)
      
      * WIP
      
      * header
      
      * WIP .cc
      
      * WIP
      
      * transpose
      
      * wip
      
      * immutable graph .h and .cc
      
      * WIP: nodeflow.cc
      
      * compile
      
      * remove all tmp dl managed ctx; they caused refcount issue
      
      * one simple test
      
      * WIP: testing
      
      * test_graph
      
      * fix graph index
      
      * fix bug in sampler; pass pytorch utest
      
      * WIP on mxnet
      
      * fix lint
      
      * fix mxnet unittest w/ unfortunate workaround
      
      * fix msvc
      
      * fix lint
      
      * SliceRows and test_nodeflow
      
      * resolve reviews
      
      * resolve reviews
      
      * try fix win ci
      
      * try fix win ci
      
      * poke win ci again
      
      * poke
      
      * lazy multigraph flag; stackoverflow error
      
      * revert node subgraph test
      
      * lazy object
      
      * try fix win build
      
      * try fix win build
      
      * poke ci
      
      * fix build script
      
      * fix compile
      
      * add a todo
      
      * fix reviews
      
      * fix compile
      
      * [Kernel] Update kernel branch (#576)
      
      * [Model] add multiprocessing training with sampling. (#484)
      
      * reorganize sampling code.
      
      * add multi-process training.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * add new API in graph store.
      
      * update barrier impl.
      
      * support both local and distributed training.
      
      * fix multiprocess train.
      
      * fix.
      
      * fix barrier.
      
      * add script for loading data.
      
      * multiprocessing sampling.
      
      * accel training.
      
      * replace pull with spmv for speedup.
      
      * nodeflow copy from parent with context.
      
      * enable GPU.
      
      * fix a bug in graph store.
      
      * enable multi-GPU training.
      
      * fix lint.
      
      * add comments.
      
      * rename to run_store_server.py
      
      * fix gcn_cv.
      
      * fix a minor bug in sampler.
      
      * handle error better in graph store.
      
      * improve graphsage_cv for distributed mode.
      
      * update README.
      
      * fix.
      
      * update.
      
      * [Tutorial] add sampling tutorial. (#522)
      
      * add sampling tutorial.
      
      * add readme
      
      * update author list.
      
      * fix indent in the code.
      
      * rename the file.
      
      * update tutorial.
      
      * fix the last API.
      
      * update image.
      
      * [BUGFIX] fix the problems in the sampling tutorial. (#523)
      
      * add index.
      
      * update.
      
      * update tutorial.
      
      * fix gpu utest
      
      * cuda utest runnable
      
      * temp disable test nodeflow; unified test for kernel
      
      * cuda test kernel done
      
      * Fixing typo in JTNN after interface change (#536)
      
      * [BugFix] Fix getting src and dst id of ALL edges in NodeFlow.apply_block (#515)
      
      * [Bug Fix] Fix inplace op at backend (#546)
      
      * Fix inplace operation
      
      * fix line seprator
      
      * [Feature] Add batch and unbatch for immutable graph (#539)
      
      * Add batch and unbatch for immutable graph
      
      * fix line seprator
      
      * fix lintr
      
      * remove unnecessary include
      
      * fix code review
      
      * [BUGFix] Improve multi-processing training (#526)
      
      * fix.
      
      * add comment.
      
      * remove.
      
      * temp fix.
      
      * initialize for shared memory.
      
      * fix graphsage.
      
      * fix gcn.
      
      * add more unit tests.
      
      * add more tests.
      
      * avoid creating shared-memory exclusively.
      
      * redefine remote initializer.
      
      * improve initializer.
      
      * fix unit test.
      
      * fix lint.
      
      * fix lint.
      
      * initialize data in the graph store server properly.
      
      * fix test.
      
      * fix test.
      
      * fix test.
      
      * small fix.
      
      * add comments.
      
      * cleanup server.
      
      * test graph store with a random port.
      
      * print.
      
      * print to stderr.
      
      * test1
      
      * test2
      
      * remove comment.
      
      * adjust the initializer signature.
      
      * [API] update graph store API. (#549)
      
      * add init_ndata and init_edata in DGLGraph.
      
      * adjust SharedMemoryGraph API.
      
      * print warning.
      
      * fix comment.
      
      * update example
      
      * fix.
      
      * fix examples.
      
      * add unit tests.
      
      * add comments.
      
      * [Refactor] Immutable graph index (#543)
      
      * WIP
      
      * header
      
      * WIP .cc
      
      * WIP
      
      * transpose
      
      * wip
      
      * immutable graph .h and .cc
      
      * WIP: nodeflow.cc
      
      * compile
      
      * remove all tmp dl managed ctx; they caused refcount issue
      
      * one simple test
      
      * WIP: testing
      
      * test_graph
      
      * fix graph index
      
      * fix bug in sampler; pass pytorch utest
      
      * WIP on mxnet
      
      * fix lint
      
      * fix mxnet unittest w/ unfortunate workaround
      
      * fix msvc
      
      * fix lint
      
      * SliceRows and test_nodeflow
      
      * resolve reviews
      
      * resolve reviews
      
      * try fix win ci
      
      * try fix win ci
      
      * poke win ci again
      
      * poke
      
      * lazy multigraph flag; stackoverflow error
      
      * revert node subgraph test
      
      * lazy object
      
      * try fix win build
      
      * try fix win build
      
      * poke ci
      
      * fix build script
      
      * fix compile
      
      * add a todo
      
      * fix reviews
      
      * fix compile
      
      * all demo use python-3 (#555)
      
      * [DEMO] Reproduce numbers of distributed training in AMLC giant graph paper (#556)
      
      * update
      
      * update
      
      * update
      
      * update num_hops
      
      * fix bug
      
      * update
      
      * report numbers of distributed training in AMLC giant graph paper
      
      * [DEMO] Remove duplicate code for sampling (#557)
      
      * update
      
      * update
      
      * re-use single-machine code
      
      * update
      
      * use relative path
      
      * update
      
      * update
      
      * update
      
      * add __init__.py
      
      * add __init__.py
      
      * import sys, os
      
      * fix typo
      
      * update
      
      * [Perf] Improve performance of graph store. (#554)
      
      * fix.
      
      * use inplace.
      
      * move to shared memory graph store.
      
      * fix.
      
      * add more unit tests.
      
      * fix.
      
      * fix test.
      
      * fix test.
      
      * disable test.
      
      * fix.
      
      * [BUGIFX] fix a bug in edge_ids (#560)
      
      * add test.
      
      * fix compute.
      
      * fix test.
      
      * turn on test.
      
      * fix a bug.
      
      * add test.
      
      * fix.
      
      * disable test.
      
      * [DEMO] Add Pytorch demo for distributed sampler (#562)
      
      * update
      
      * update
      
      * update
      
      * add sender
      
      * update
      
      * remove duplicate cpde
      
      * [Test] Add gtest to project (#547)
      
      * add gtest module
      
      * add gtest
      
      * fix
      
      * Update CMakeLists.txt
      
      * Update README.md
      
      * [Perf] lazily create msg_index. (#563)
      
      * lazily create msg_index.
      
      * update test.
      
      * [BUGFIX] fix bugs for running GCN on giant graphs. (#561)
      
      * load mxnet csr.
      
      * enable load large csr.
      
      * fix
      
      * fix.
      
      * fix int overflow.
      
      * fix test.
      
      * [BugFix] Fix error when bfs_level = 0 in Entity Classification with RGCN (#559)
      
      * [DEMO] Update demo of distributed sampler (#564)
      
      * update
      
      * update
      
      * update demo
      
      * add network cpp test (#565)
      
      * Add unittest for C++ RPC (#566)
      
      * [CI] Fix CI for cpp test (#570)
      
      * fix CI for cpp test
      
      * update port number
      
      * [Docker] update docker image (#575)
      
      * update docker image
      
      * specify lint version
      
      * rm torch import from unified tests
      
      * [Kernel][Scheduler][MXNet] Scheduler for DGL kernels and MXNet backend support (#541)
      
      * [Model] add multiprocessing training with sampling. (#484)
      
      * reorganize sampling code.
      
      * add multi-process training.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * add new API in graph store.
      
      * update barrier impl.
      
      * support both local and distributed training.
      
      * fix multiprocess train.
      
      * fix.
      
      * fix barrier.
      
      * add script for loading data.
      
      * multiprocessing sampling.
      
      * accel training.
      
      * replace pull with spmv for speedup.
      
      * nodeflow copy from parent with context.
      
      * enable GPU.
      
      * fix a bug in graph store.
      
      * enable multi-GPU training.
      
      * fix lint.
      
      * add comments.
      
      * rename to run_store_server.py
      
      * fix gcn_cv.
      
      * fix a minor bug in sampler.
      
      * handle error better in graph store.
      
      * improve graphsage_cv for distributed mode.
      
      * update README.
      
      * fix.
      
      * update.
      
      * [Tutorial] add sampling tutorial. (#522)
      
      * add sampling tutorial.
      
      * add readme
      
      * update author list.
      
      * fix indent in the code.
      
      * rename the file.
      
      * update tutorial.
      
      * fix the last API.
      
      * update image.
      
      * [BUGFIX] fix the problems in the sampling tutorial. (#523)
      
      * add index.
      
      * update.
      
      * update tutorial.
      
      * fix gpu utest
      
      * cuda utest runnable
      
      * temp disable test nodeflow; unified test for kernel
      
      * cuda test kernel done
      
      * edge softmax module
      
      * WIP
      
      * Fixing typo in JTNN after interface change (#536)
      
      * mxnet backend support
      
      * improve reduce grad
      
      * add max to unittest backend
      
      * fix kernel unittest
      
      * [BugFix] Fix getting src and dst id of ALL edges in NodeFlow.apply_block (#515)
      
      * lint
      
      * lint
      
      * win build
      
      * [Bug Fix] Fix inplace op at backend (#546)
      
      * Fix inplace operation
      
      * fix line seprator
      
      * [Feature] Add batch and unbatch for immutable graph (#539)
      
      * Add batch and unbatch for immutable graph
      
      * fix line seprator
      
      * fix lintr
      
      * remove unnecessary include
      
      * fix code review
      
      * [BUGFix] Improve multi-processing training (#526)
      
      * fix.
      
      * add comment.
      
      * remove.
      
      * temp fix.
      
      * initialize for shared memory.
      
      * fix graphsage.
      
      * fix gcn.
      
      * add more unit tests.
      
      * add more tests.
      
      * avoid creating shared-memory exclusively.
      
      * redefine remote initializer.
      
      * improve initializer.
      
      * fix unit test.
      
      * fix lint.
      
      * fix lint.
      
      * initialize data in the graph store server properly.
      
      * fix test.
      
      * fix test.
      
      * fix test.
      
      * small fix.
      
      * add comments.
      
      * cleanup server.
      
      * test graph store with a random port.
      
      * print.
      
      * print to stderr.
      
      * test1
      
      * test2
      
      * remove comment.
      
      * adjust the initializer signature.
      
      * try
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * try
      
      * test
      
      * test
      
      * test
      
      * try
      
      * try
      
      * try
      
      * test
      
      * fix
      
      * try gen_target
      
      * fix gen_target
      
      * fix msvc var_args expand issue
      
      * fix
      
      * [API] update graph store API. (#549)
      
      * add init_ndata and init_edata in DGLGraph.
      
      * adjust SharedMemoryGraph API.
      
      * print warning.
      
      * fix comment.
      
      * update example
      
      * fix.
      
      * fix examples.
      
      * add unit tests.
      
      * add comments.
      
      * [Refactor] Immutable graph index (#543)
      
      * WIP
      
      * header
      
      * WIP .cc
      
      * WIP
      
      * transpose
      
      * wip
      
      * immutable graph .h and .cc
      
      * WIP: nodeflow.cc
      
      * compile
      
      * remove all tmp dl managed ctx; they caused refcount issue
      
      * one simple test
      
      * WIP: testing
      
      * test_graph
      
      * fix graph index
      
      * fix bug in sampler; pass pytorch utest
      
      * WIP on mxnet
      
      * fix lint
      
      * fix mxnet unittest w/ unfortunate workaround
      
      * fix msvc
      
      * fix lint
      
      * SliceRows and test_nodeflow
      
      * resolve reviews
      
      * resolve reviews
      
      * try fix win ci
      
      * try fix win ci
      
      * poke win ci again
      
      * poke
      
      * lazy multigraph flag; stackoverflow error
      
      * revert node subgraph test
      
      * lazy object
      
      * try fix win build
      
      * try fix win build
      
      * poke ci
      
      * fix build script
      
      * fix compile
      
      * add a todo
      
      * fix reviews
      
      * fix compile
      
      * WIP
      
      * WIP
      
      * all demo use python-3 (#555)
      
      * ToImmutable and CopyTo
      
      * [DEMO] Reproduce numbers of distributed training in AMLC giant graph paper (#556)
      
      * update
      
      * update
      
      * update
      
      * update num_hops
      
      * fix bug
      
      * update
      
      * report numbers of distributed training in AMLC giant graph paper
      
      * [DEMO] Remove duplicate code for sampling (#557)
      
      * update
      
      * update
      
      * re-use single-machine code
      
      * update
      
      * use relative path
      
      * update
      
      * update
      
      * update
      
      * add __init__.py
      
      * add __init__.py
      
      * import sys, os
      
      * fix typo
      
      * update
      
      * [Perf] Improve performance of graph store. (#554)
      
      * fix.
      
      * use inplace.
      
      * move to shared memory graph store.
      
      * fix.
      
      * add more unit tests.
      
      * fix.
      
      * fix test.
      
      * fix test.
      
      * disable test.
      
      * fix.
      
      * [BUGIFX] fix a bug in edge_ids (#560)
      
      * add test.
      
      * fix compute.
      
      * fix test.
      
      * turn on test.
      
      * fix a bug.
      
      * add test.
      
      * fix.
      
      * disable test.
      
      * DGLRetValue DGLContext conversion
      
      * [DEMO] Add Pytorch demo for distributed sampler (#562)
      
      * update
      
      * update
      
      * update
      
      * add sender
      
      * update
      
      * remove duplicate cpde
      
      * [Test] Add gtest to project (#547)
      
      * add gtest module
      
      * add gtest
      
      * fix
      
      * Update CMakeLists.txt
      
      * Update README.md
      
      * Add support to convert immutable graph to 32 bits
      
      * [Perf] lazily create msg_index. (#563)
      
      * lazily create msg_index.
      
      * update test.
      
      * fix binary reduce following new minigun template
      
      * enable both int64 and int32 kernels
      
      * [BUGFIX] fix bugs for running GCN on giant graphs. (#561)
      
      * load mxnet csr.
      
      * enable load large csr.
      
      * fix
      
      * fix.
      
      * fix int overflow.
      
      * fix test.
      
      * new kernel interface done for CPU
      
      * docstring
      
      * rename & docstring
      
      * copy reduce and backward
      
      * [BugFix] Fix error when bfs_level = 0 in Entity Classification with RGCN (#559)
      
      * [DEMO] Update demo of distributed sampler (#564)
      
      * update
      
      * update
      
      * update demo
      
      * adapt cuda kernels to the new interface
      
      * add network cpp test (#565)
      
      * fix bug
      
      * Add unittest for C++ RPC (#566)
      
      * [CI] Fix CI for cpp test (#570)
      
      * fix CI for cpp test
      
      * update port number
      
      * [Docker] update docker image (#575)
      
      * update docker image
      
      * specify lint version
      
      * rm torch import from unified tests
      
      * remove pytorch-specific test_function
      
      * fix unittest
      
      * fix
      
      * fix unittest backend bug in converting tensor to numpy array
      
      * fix
      
      * mxnet version
      
      * [BUGFIX] fix for MXNet 1.5. (#552)
      
      * remove clone.
      
      * turn on numpy compatible.
      
      * Revert "remove clone."
      
      This reverts commit 17bbf76ed72ff178df6b3f35addc428048672457.
      
      * revert format changes
      
      * fix mxnet api name
      
      * revert mistakes in previous revert
      
      * roll back CI to 20190523 build
      
      * fix unittest
      
      * disable test_shared_mem_store.py for now
      
      * remove mxnet/test_specialization.py
      
      * sync win64 test script
      
      * fix lowercase
      
      * missing backend in gpu unit test
      
      * transpose to get forward graph
      
      * pass update all
      
      * add sanity check
      
      * passing test_specialization.py
      
      * fix and pass test_function
      
      * fix check
      
      * fix pytorch softmax
      
      * mxnet kernels
      
      * c++ lint
      
      * pylint
      
      * try
      
      * win build
      
      * fix
      
      * win
      
      * ci enable gpu build
      
      * init submodule recursively
      
      * backend docstring
      
      * try
      
      * test win dev
      
      * doc string
      
      * disable pytorch test_nn
      
      * try to fix windows issue
      
      * bug fixed, revert changes
      
      * [Test] fix CI. (#586)
      
      * disable unit test in mxnet tutorial.
      
      * retry socket connection.
      
      * roll back to set_np_compat
      
      * try to fix multi-processing test hangs when it fails.
      
      * fix test.
      
      * fix.
      
      * doc string
      
      * doc string and clean up
      
      * missing field in ctypes
      
      * fix node flow schedule and unit test
      
      * rename
      
      * pylint
      
      * copy from parent default context
      
      * fix unit test script
      
      * fix
      
      * demo bug in nodeflow gpu test
      
      * [Kernel][Bugfix] fix nodeflow bug (#604)
      
      * fix nodeflow bug
      
      * remove debug code
      
      * add build gtest option
      
      * fix cmake; fix graph index bug in spmv.py
      
      * remove clone
      
      * fix div rhs grad bug
      
      * [Kernel] Support full builtin method, edge softmax and unit tests (#605)
      
      * add full builtin support
      
      * unit test
      
      * unit test backend
      
      * edge softmax
      
      * apply edge with builtin
      
      * fix kernel unit test
      
      * disable mxnet test_shared_mem_store
      
      * gen builtin reduce
      
      * enable mxnet gpu unittest
      
      * revert some changes
      
      * docstring
      
      * add note for the hack
      
      * [Kernel][Unittest][CI] Fix MXNet GPU CI (#607)
      
      * update docker image for MXNet GPU CI
      
      * force all dgl graph input and output on CPU
      
      * fix gpu unittest
      
      * speedup compilation
      
      * add some comments
      
      * lint
      
      * add more comments
      
      * fix as requested
      
      * add some comments
      
      * comment
      
      * lint
      
      * lint
      
      * update pylint
      
      * fix as requested
      
      * lint
      
      * lint
      
      * lint
      
      * docstrings of python DGL kernel entries
      
      * disable lint warnings on arguments in kernel.py
      
      * fix docstring in scheduler
      
      * fix some bug in unittest; try again
      
      * Revert "Merge branch 'kernel' of github.com:zzhang-cn/dgl into kernel"
      
      This reverts commit 1d2299e68b004182ea6130b088de1f1122b18a49, reversing
      changes made to ddc97fbf1bec2b7815c0da7c74f7ecb2f428889b.
      
      * Revert "fix some bug in unittest; try again"
      
      This reverts commit ddc97fbf1bec2b7815c0da7c74f7ecb2f428889b.
      
      * more comprehensive kernel test
      
      * remove shape check in test_specialization
      653428bd
  15. 02 Jun, 2019 1 commit
    • Minjie Wang's avatar
      [Graph] Add API to convert graph to simple graph (#587) · 01a4cc5b
      Minjie Wang authored
      * to simple
      
      * WIP: multigraph flag
      
      * graph index refactor; pass basic testing
      
      * graph index refactor; pass basic testing
      
      * fix bug in to_simple; pass torch test
      
      * fix mx utest
      
      * fix example
      
      * fix lint
      
      * fix ci
      
      * poke ci
      
      * poke ci
      
      * WIP
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * change ci workspace
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * delete ci
      
      * use enum for multigraph flag
      01a4cc5b
  16. 21 May, 2019 1 commit
    • Minjie Wang's avatar
      [Refactor] Immutable graph index (#543) · 605b5185
      Minjie Wang authored
      * WIP
      
      * header
      
      * WIP .cc
      
      * WIP
      
      * transpose
      
      * wip
      
      * immutable graph .h and .cc
      
      * WIP: nodeflow.cc
      
      * compile
      
      * remove all tmp dl managed ctx; they caused refcount issue
      
      * one simple test
      
      * WIP: testing
      
      * test_graph
      
      * fix graph index
      
      * fix bug in sampler; pass pytorch utest
      
      * WIP on mxnet
      
      * fix lint
      
      * fix mxnet unittest w/ unfortunate workaround
      
      * fix msvc
      
      * fix lint
      
      * SliceRows and test_nodeflow
      
      * resolve reviews
      
      * resolve reviews
      
      * try fix win ci
      
      * try fix win ci
      
      * poke win ci again
      
      * poke
      
      * lazy multigraph flag; stackoverflow error
      
      * revert node subgraph test
      
      * lazy object
      
      * try fix win build
      
      * try fix win build
      
      * poke ci
      
      * fix build script
      
      * fix compile
      
      * add a todo
      
      * fix reviews
      
      * fix compile
      605b5185
  17. 29 Mar, 2019 1 commit
    • Chao Ma's avatar
      [RPC] add C++ RPC infrastructure and distributed sampler (#465) · 5d494c62
      Chao Ma authored
      * add C++ rpc infrastructure and distributed sampler
      
      * update
      
      * update lint
      
      * update lint
      
      * update lint
      
      * update
      
      * update
      
      * update
      
      * updare
      
      * update
      
      * update
      
      * update
      
      * update serialize and unittest
      
      * update serialize
      
      * lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update unittest
      
      * put Finalize() to __del__
      
      * update unittest
      
      * update
      
      * delete buffer in Finalize
      
      * update unittest
      
      * update unittest
      
      * update unittest
      
      * update unittest
      
      * update
      
      * update
      
      * fix small bug
      
      * windows socket impl
      
      * update API
      
      * fix bug in serialize
      
      * fix bug in serialzie
      
      * set parent graph
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * fix lint
      
      * fix
      
      * fix windows compilation error
      
      * fix windows error
      
      * change API to lower-case
      
      * update test
      
      * fix typo
      
      * update
      
      * add SamplerPool
      
      * add SamplerPool
      
      * update
      
      * update test
      
      * update
      
      * update
      
      * update
      
      * update
      
      * add example
      
      * update
      
      * update
      5d494c62
  18. 05 Mar, 2019 1 commit
    • Minjie Wang's avatar
      [Refactor] Nodeflow, sampling, CAPI (#430) · ca2a7e1c
      Minjie Wang authored
      * enable cython
      
      * add helper function and data structure for void_p vector return
      
      * move sampler from graph index to contrib.sampling
      
      * WIP
      
      * WIP
      
      * refactor layer sampling
      
      * pass tests
      
      * fix lint
      
      * fix graphsage
      
      * remove comments
      
      * pickle test
      
      * fix comments
      
      * update dev guide for cython build
      ca2a7e1c
  19. 05 Dec, 2018 1 commit
    • Lingfan Yu's avatar
      [Refactor] Rename before release (#261) · a1d50f0f
      Lingfan Yu authored
      * include/dgl/runtime
      
      * include
      
      * src/runtime
      
      * src/graph
      
      * src/scheduler
      
      * src
      
      * clean up CMakeLists
      
      * further clean up in cmake
      
      * install commands
      
      * python/dgl/_ffi/_cython
      
      * python/dgl/_ffi/_ctypes
      
      * python/dgl/_ffi
      
      * python/dgl
      
      * some fix
      
      * copy right
      a1d50f0f
  20. 08 Nov, 2018 1 commit
    • GaiYu0's avatar
      [API] Graph traversal (#103) · 23191674
      GaiYu0 authored
      * bfs, dfs and topological traversal
      
      * dfs and test cases
      
      * Conflicts:
      	python/dgl/graph.py
      	src/graph/graph.cc
      	src/graph/graph_op.cc
      
      * documentation
      
      * requested changes
      
      * Conflicts:
      	Jenkinsfile
      	examples/pytorch/gcn/gcn.py
      	examples/pytorch/gcn/gcn_spmv.py
      	python/dgl/graph.py
      	python/dgl/graph_index.py
      	src/graph/graph.cc
      	src/graph/graph_op.cc
      
      * Conflicts:
      	Jenkinsfile
      	python/dgl/graph_index.py
      
      * fix lint errors
      
      * fix lint errors
      
      * fix lint errors
      
      * fix test cases
      
      * requested changes
      
      * traversal interface
      
      * [Bug] fixed a typo that caused syntax error (#120)
      
      * WIP
      
      * bfs nodes generator works
      
      * topological traversal
      
      * WIP: dfs_edges
      
      * dfs edges
      
      * dfs labeled edges
      
      * utest for traversal
      
      * fix lint
      
      * fix utest
      
      * code clean
      
      * changes as requested
      23191674
  21. 19 Oct, 2018 1 commit
  22. 17 Oct, 2018 1 commit
    • Lingfan Yu's avatar
      Efficient send_and_recv (#83) · 750e5037
      Lingfan Yu authored
      * python side send_and_recv shortcut
      
      * common util function for c apis
      
      * degree bucketing scheduler
      
      * scheduler c apis
      
      * cmake
      
      * python side logics
      
      * minor
      
      * fix multiple msg/red func cases
      
      * remove shell echo command in Jenkinsfile...
      
      * fuse apply for send_and_recv
      
      * fuse update func for update_all
      
      * typo...
      
      * handle anonymous
      
      * add degree bucketing for entire graph
      
      * degree bucketing executor
      
      * minor
      
      * style
      
      * rename graph_mapping to recv_nodes
      
      * fix some comments
      750e5037