Commits · cd204a4ac9960aada8e01fce84792e63798b1ee5 · OpenDAS / dgl

21 Aug, 2020 3 commits
- [Distributed] Use barrier instead of sleep in DistDataloader (#2086) · cd204a4a
  Jinjing Zhou authored Aug 21, 2020
```
* use barrier instead of sleep

* lint
```
  cd204a4a
- [User Guide] Split the Graph Chapter into Multiple RST Files (#2081) · 6d212983
  Mufei Li authored Aug 21, 2020
```
* Graph chapter, user guide

* Split

* Update
```
  6d212983
- [Readme] 0.5.0 release and bump to new prerelease versions (#2082) · ad8530a4
  Quan (Andy) Gan authored Aug 21, 2020
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* [Readme] 0.5.0 release and bump to new prerelease versions

* bump version
```
  ad8530a4
20 Aug, 2020 6 commits

[Doc] Scan the API docs and make many changes (#2080) · f13b9b62

Minjie Wang authored Aug 20, 2020



* WIP: api

* dgl.sampling, dgl.data

* dgl.sampling; dgl.dataloading

* sampling packages

* convert

* subgraph

* deprecate

* subgraph APIs

* All docstrings for convert/subgraph/transform

* almost all funcs under dgl namespace

* WIP: DGLGraph

* done graph query

* message passing functions

* lint

* fix merge error

* fix test

* lint

* fix
Co-authored-by: Quan Gan <coin2028@hotmail.com>

f13b9b62

Update version check of PyTorch to 1.5 (#2079) · 35e25914
Jinjing Zhou authored Aug 20, 2020

35e25914
Graph chapter, user guide (#2078) · debfd4bf
Mufei Li authored Aug 20, 2020

debfd4bf
Fix docs (#2073) · ef78d675
Jinjing Zhou authored Aug 20, 2020
```
* remove mxnet tutorial

* remove sse

* fix docs
```
ef78d675
[Model] fix PinSAGE example for 0.5 release (#2072) · 28deee4d
Quan (Andy) Gan authored Aug 20, 2020

28deee4d

Fix (#2070) · dba8c825

Mufei Li authored Aug 20, 2020


Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>

dba8c825

19 Aug, 2020 16 commits
- update Readme (#2068) · 8f3e423c
  xiang song(charlie.song) authored Aug 19, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
```
  8f3e423c
- [Bug][Doc] Fix NodeDataLoader docstrings and code (#2063) · ef976be1
  Quan (Andy) Gan authored Aug 19, 2020
  
  ef976be1
- [Example] Fix GCMC (#2067) · 2b77ad41
  Mufei Li authored Aug 19, 2020
```
* Fix

* Update data.py

* Update README.md

* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
```
  2b77ad41
- fix tu dataset (#2064) · 83654fdc
  Tong He authored Aug 19, 2020
  
  83654fdc
- Update (#2062) · 100d9328
  Mufei Li authored Aug 19, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
```
  100d9328
- [Example] Fix GATNE-T (#2061) · a260a6e6
  Mufei Li authored Aug 19, 2020
```
* Update README.md

* Update

* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
```
  a260a6e6
- [Frame] Fix for Column Index Device (#2055) · 3af0e91c
  Mufei Li authored Aug 19, 2020
```
* Update frame.py

* add unit test

* fix test

* fix

* fix

* fix
Co-authored-by: Quan Gan <coin2028@hotmail.com>
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  3af0e91c
- deprecated some mxnet example (#2054) · 4c5136c8
  xiang song(charlie.song) authored Aug 19, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
```
  4c5136c8
- [Windows] Work around the bug from CL 19.10 (#2059) · 167536db
  Quan (Andy) Gan authored Aug 19, 2020
```
* [Windows] Work around the bug from CL 19.10

* fix
```
  167536db
- [BugFix] Fix a small bug on kvstore (#2058) · a4a7e02f
  Chao Ma authored Aug 19, 2020
```
* small fix

* update
```
  a4a7e02f
- Update (#2057) · 6e8f7605
  Mufei Li authored Aug 19, 2020
  
  6e8f7605
- remove debug information (#2056) · 75e89a15
  Quan (Andy) Gan authored Aug 19, 2020
  
  75e89a15
- [Distributed] Some small fixes on doc (#2049) · 9da1629c
  Da Zheng authored Aug 18, 2020
```
* quick fix.

* update sparse optimizer.

* fix.

* fix
```
  9da1629c
- Fix tree lstm (#2052) · 4edde000
  xiang song(charlie.song) authored Aug 19, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
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  4edde000
- Update README.md (#1367) · c8a44c78
  Rajarshi Das authored Aug 18, 2020
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updating readme to reflect argparse args
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
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  c8a44c78
- Fix (#2051) · f3f35098
  xiang song(charlie.song) authored Aug 19, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
```
  f3f35098
18 Aug, 2020 13 commits

[Example] Rgcn distributed training (#1999) · 0052f121

xiang song(charlie.song) authored Aug 19, 2020



* add entity_classify_dist

* upd

* update

* Fix

* Fix

* upd

* upd

* upd

* upd

* global eval

* Fix

* Fix

* Fix

* Fix

* FIx

* upd

* upd

* update

* support pytorch sparse embedding

* Fix

* Fix

* update Readme

* update with new API

* Fix

* update Readme

* add fanout for validation neighbor sampling
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-24-210.ec2.internal>
Co-authored-by: Chao Ma <mctt90@gmail.com>
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

0052f121

[Doc] Update the docstring of distributed APIs. (#2025) · 75ffc31f

Da Zheng authored Aug 18, 2020



* add doc.

* update DistGraph.

* add DistTensor.

* update DistEmbedding.

* add partition.py

* add sampling.

* fix.

* add graph partition book and create a base class.

* fix test.

* add rst.

* update doc rst.

* update.

* fix.

* fix docs

* update distributed tensor and embeddings.

* add checks.

* update DistGraph.

* update initialization.

* fix graph partition book.

* update graph partition book.

* update partition.

* update partition.

* fix.

* add example code.

* update DistGraph

* Update python/dgl/distributed/dist_context.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_context.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_dataloader.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_dataloader.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_dataloader.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* update initialize.

* update dataloader.

* update distgraph.

* update DistGraph.

* update DistTensor.

* update.

* more updates.

* fix lint.

* add num_nodes and num_edges
Co-authored-by: Chao Ma <mctt90@gmail.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

75ffc31f

Fix mxnet gin (#2048) · 3d654843
xiang song(charlie.song) authored Aug 19, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
```
3d654843
[NN] [Doc] Fix nn api doc (#2047) · 65866989
Tianjun Xiao authored Aug 18, 2020
```
* fix mxnet nn doc and no note on chebconv

* change notes to note to highlight
```
65866989
[Convert] Reserve node/edge IDs in to_heterogeneous (#2045) · dacc7afe
Mufei Li authored Aug 18, 2020
```
* Fix

* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
```
dacc7afe
[Feature] Change the Default Value of transpose in DGLGraph.adj (#2046) · 9088c635
Mufei Li authored Aug 18, 2020
```
* Update adj

* Fix
```
9088c635
[Feature] Make sample_neighbors copy features on demand (#2042) · edfbee2c
Quan (Andy) Gan authored Aug 18, 2020
```
* fix

* fix

* lint

* fix

* test

* fix

* fix
```
edfbee2c

[Example] rm gcn spmv (#2044) · 09ec6020

xiang song(charlie.song) authored Aug 18, 2020



* rm gcn spmv

* remove useless test

* remove useless test
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>

09ec6020

upd (#2043) · 6d346281
Zihao Ye authored Aug 18, 2020

6d346281
remove kvstore example which is not maintianed and is out of date (#2041) · 1a1f38e3
xiang song(charlie.song) authored Aug 18, 2020
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
```
1a1f38e3
[Model] use dask to parallelize preprocessing (#2040) · 6367318f
Quan (Andy) Gan authored Aug 18, 2020

6367318f
[Test] Remove Test for metapath_random_walk (#2039) · 47c96dd1
Mufei Li authored Aug 18, 2020
```
* Update test_randomwalk.py

* Update test_randomwalk.py
```
47c96dd1

[Bugfix] Fix batching isolated node types (#2035) · aa19df1b

Quan (Andy) Gan authored Aug 18, 2020



* [Bugfix] Fix batching isolated ntypes

* fix test

* remove test.py
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

aa19df1b

17 Aug, 2020 2 commits

[Doc/Feature] Refactor, doc update and behavior fix for graphs (#1983) · be444e52

Mufei Li authored Aug 18, 2020



* Update graph

* Fix for dgl.graph

* from_scipy

* Replace canonical_etypes with relations

* from_networkx

* Update for hetero_from_relations

* Roll back the change of canonical_etypes to relations

* heterograph

* bipartite

* Update doc

* Fix lint

* Fix lint

* Fix test cases

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Update

* Fix test

* Fix

* Update

* Use DGLError

* Update

* Update

* Update

* Update

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* rewrite sanity checks

* delete unnecessary checks

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Update

* Update

* Update

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Fix

* Update

* Fix

* Update

* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan Gan <coin2028@hotmail.com>

be444e52

[NN] Add ChebConv for Tensorflow (#2038) · 0afc3cf8
Jinjing Zhou authored Aug 17, 2020
```
* add chebconv

* fix

* lint

* fix lint

* docs
```
0afc3cf8