Commits · ac6be7d7612ffce89ebaf5b9c7c1d7e290792dfc · OpenDAS / dgl

"tests/vscode:/vscode.git/clone" did not exist on "ea8b5d7933a659b20127a852645ee1cbc5494f4e"

12 May, 2023 1 commit
- [Benchmark] update node classification for multigpu benchmark (#5674) · ac6be7d7
  Rhett Ying authored May 12, 2023
```
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
```
  ac6be7d7
11 May, 2023 1 commit
- [Example] GatedGCN (#5659) · 41baa0e4
  paoxiaode authored May 11, 2023
  
  41baa0e4
10 May, 2023 1 commit
- [Benchmark] log train time and test accuracy, choose device (#5662) · d64f7c48
  Rhett Ying authored May 10, 2023
  
  d64f7c48
20 Apr, 2023 1 commit
- [Sparse] Add conversion between DGLGraph and SparseMatrix. (#5553) · f41934df
  czkkkkkk authored Apr 20, 2023
  
  f41934df
19 Apr, 2023 1 commit
- [Example] Sparse Example for HAN (#5568) · de292c7a
  Mufei Li authored Apr 19, 2023
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
```
  de292c7a
10 Apr, 2023 1 commit
- [Example] Fix Various Examples Related to TorchMetrics (#5521) · a1f74982
  Mufei Li authored Apr 10, 2023
```
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
```
  a1f74982
29 Mar, 2023 1 commit
- [Misc] Rename number_of_edges and number_of_nodes to num_edges and num_nodes in examples. (#5492) · 5008af22
  Hongzhi (Steve), Chen authored Mar 29, 2023
```
* pytorch_example

* fix

---------
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
```
  5008af22
22 Mar, 2023 1 commit
- Update main.py (#5460) · a0730530
  Mufei Li authored Mar 22, 2023
  
  a0730530
15 Mar, 2023 1 commit
- add a link about the removed TGN example (#5456) · 8d99d30a
  Minjie Wang authored Mar 15, 2023
  
  8d99d30a
09 Mar, 2023 1 commit
- Tensorflow examples fix (#5433) · b7ce4b6a
  DominikaJedynak authored Mar 09, 2023
  
  b7ce4b6a
22 Feb, 2023 1 commit

[Model] Add `dgl.nn.CuGraphSAGEConv` model (#5137) · bcf9923b

Tingyu Wang authored Feb 22, 2023



* add CuGraphSAGEConv model

* fix lint issues

* update model to reflect changes in make_mfg_csr(), move max_in_degree to forward()

* lintrunner

* allow reset_parameters()

* remove norm option, simplify test

* allow full graph fallback option, add example

* address comments

* address reviews

---------
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

bcf9923b

19 Feb, 2023 2 commits

lintrunner (#5326) · 9fe5092c

Hongzhi (Steve), Chen authored Feb 19, 2023


Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

9fe5092c

examples (#5323) · 704bcaf6

Hongzhi (Steve), Chen authored Feb 19, 2023


Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>

704bcaf6

15 Feb, 2023 1 commit

[Model] Update `CuGraphRelGraphConv` to use `pylibcugraphops=23.02` (#5217) · 19b3cea1

Tingyu Wang authored Feb 15, 2023



* update cugraph_relgraphconv

* update equality test

* update cugraph rgcn example

* update RelGraphConvAgg based on latest API changes

* enable fallback option to fg when fanout is large

---------
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

19b3cea1

01 Feb, 2023 1 commit

Cleanup mock_sparse related code. (#5230) · b3308ae7

Hongzhi (Steve), Chen authored Feb 01, 2023



* remove_mock_sparse_example

* mock_sparse_test

* remove_mock_sparse

---------
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

b3308ae7

20 Jan, 2023 1 commit

Update example with spmatrix. (#5219) · 30fb03a6

Hongzhi (Steve), Chen authored Jan 20, 2023



* update

* graph
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

30fb03a6

12 Jan, 2023 1 commit
- Delete train_sampling_unsupervised.py (#5161) · cdfd1e38
  Xin Yao authored Jan 13, 2023
  
  cdfd1e38
06 Jan, 2023 3 commits
- [API Deprecation]Deprecate contrib module (#5114) · 56ffb650
  peizhou001 authored Jan 06, 2023
  
  56ffb650
- [API Deprecation] Remove _dataloading and tgcn example (#5118) · 436de3d1
  peizhou001 authored Jan 06, 2023
  
  436de3d1
- deprecate candidates in dataloader (#5117) · c55ab2d1
  peizhou001 authored Jan 06, 2023
  
  c55ab2d1
05 Jan, 2023 2 commits
- [Example][Refactor] Multi-gpu graphsage link prediction example refactor (#5091) · a506ebe8
  Chang Liu authored Jan 05, 2023
  
  a506ebe8
- [Example] Sparse Graph Transformer (#5069) · ec3934d0
  rudongyu authored Jan 05, 2023
```
* gt example

* update

* update

* update

* update

* lint

* Update examples/sparse/graph_transformer.py
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
```
  ec3934d0
03 Jan, 2023 1 commit

[Sparse] Polish sparse matrix creation functions (#5093) · 9169fc35

Mufei Li authored Jan 03, 2023



* update

* Update

* Update

* Update

* Update
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>

9169fc35

29 Dec, 2022 2 commits

[Sparse] Namespace migration and doc update (#5088) · 37bd0925

Mufei Li authored Dec 29, 2022



* update

* lint

* lint

* comments
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>

37bd0925

[Sparse] Add tests for sparse examples; Migrate from mock_sparse to mock_sparse2 (#5073) · 025e4321

Minjie Wang authored Dec 29, 2022



* pass gcn

* example tests

* pass gcnii, hgnn, sgc, sign

* black

* test file

* add torchmetrics

* migrate appnp, c_and_s, twirls

* fix style

* minor fix

* fix hypergraphatt and twirls

* pass gat

* fix torchmetric

* lintrunner
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

025e4321

28 Dec, 2022 1 commit

rename (#5058) · bda6a816

Hongzhi (Steve), Chen authored Dec 28, 2022


Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

bda6a816

18 Dec, 2022 1 commit
- [Sparse] GCNII example (#5008) · 6bd81758
  paoxiaode authored Dec 18, 2022
  
  6bd81758
12 Dec, 2022 1 commit
- [Misc] Small fix in sparse GCN example (#5006) · 236fac4f
  Hongzhi (Steve), Chen authored Dec 12, 2022
```
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
```
  236fac4f
09 Dec, 2022 1 commit

[Sparse] GCN Example (#4996) · e28f0781

paoxiaode authored Dec 09, 2022



* add GCN sparse matrix example

* refine GCN example

* refine GCN example

* change train function

* [Bugfix] Turn off `use_alternate_stream` when TensorAdaptor is not enabled (#4987)

* turn off use_alternate_stream when tensoradaptor is not enabled

* add docstring

* Update (#4997)
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>

* refine GCN example

* add GCN sparse matrix example

* refine GCN example

* refine GCN example

* change train function

* refine GCN example

* add highlight comment

* refine code

* refine code

* refine by black and flake8

* refine the comment to 80 char length

* refine the comment

* refine comment
Co-authored-by: Xin Yao <xiny@nvidia.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>

e28f0781

05 Dec, 2022 2 commits

[Sparse][Example] Add TWIRLS example in sparse API (#4922) · c604366d
Minjie Wang authored Dec 05, 2022
```
* add twirls

* update attention part

* update; add val_like to mock_sparse

* black
```
c604366d

GCN example correction (#4969) (#4976) · b84de903

Dylan authored Dec 05, 2022

Correction like mentioned in #4969

I noticed that there is a normalisation step on line 97 while the normalised values are not used downstream. Even if this was meant to show the normalisation step, it would not be calculating the normalisation step described in the CGN paper. The paper considers both in and out degrees while the normalisation in the code only describes normalisation using the in degrees.
In the end, the normalised values are assigned to g.ndata["norm"] but these values are not used afterwards.

Having a normalisation step here is also unnecessary since the GraphConv layer that is used already takes care of the normalisation. https://docs.dgl.ai/en/0.9.x/_modules/dgl/nn/pytorch/conv/graphconv.html#GraphConv

It confused me for a second thinking that I had to do the normalisation myself but this is already handled by the GraphConf.

b84de903

01 Dec, 2022 3 commits

[Example] add entity_sample example of using `CuGraphRelGraphConv` (#4827) · 943abba3

Tingyu Wang authored Dec 01, 2022



* add entity_sample example

* update message

* address review, update api call

* Update examples/pytorch/rgcn/entity_sample_cugraph_relgraphconv.py
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* Update examples/pytorch/rgcn/entity_sample_cugraph_relgraphconv.py
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* Update examples/pytorch/rgcn/entity_sample_cugraph_relgraphconv.py
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* address review

* move example and add description
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

943abba3

[Sparse] C&S Example (#4963) · a5a0d9ed

Mufei Li authored Dec 01, 2022



* Update

* Update

* Update

* Update
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>

a5a0d9ed

[API Deprecation] Remove candidates in DGLGraph (#4946) · 61139302
peizhou001 authored Dec 01, 2022

61139302

28 Nov, 2022 2 commits
- [Example] Hypergraph attention (#4941) · 1edc9233
  Quan (Andy) Gan authored Nov 28, 2022
```
* hypergraph attention

* address comments
```
  1edc9233
- [Sparse] GAT Example (#4955) · 7469bc92
  Mufei Li authored Nov 28, 2022
```
* Update

* Update

* Update

* CI
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
```
  7469bc92
25 Nov, 2022 3 commits

small (#4954) · 0b9f64d6

Hongzhi (Steve), Chen authored Nov 25, 2022


Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

0b9f64d6

[Misc] Auto fix by black. (#4952) · 226d1159

Hongzhi (Steve), Chen authored Nov 25, 2022



* black on explain_main

* isort

* add dot
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

226d1159

black (#4951) · f118ea95

Hongzhi (Steve), Chen authored Nov 25, 2022


Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

f118ea95

23 Nov, 2022 1 commit

[Sparse] APPNP example (#4919) · c53deb26

Mufei Li authored Nov 23, 2022



* Update

* Update

* Update

* Update
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>

c53deb26