GitLab

* first commit

* more commit

* fix and docstring

* add to api reference

* address comments

* Update convert.py

* added option for batching empty data, fixes #2526

* added option for batching empty data, fixes #2526

* decreased line lengths

* removed trailing whitespace

* fixed wrong feature name

* [Bugfix] stop erasing schema of frames w/ no cols (fixes #2528)

* removed arg doc
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* added option for batching empty data, fixes #2526

* added option for batching empty data, fixes #2526

* decreased line lengths

* removed trailing whitespace

* fixed wrong feature name

* now default behavior when all graphs are empty
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-59-204.ec2.internal>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* return indices from dataloader

* fixes

* fix

* fix distgraph and added some todos

* Update dataloader.py

* Update dataloader.py
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

* add graph dataloader

* add to doc

* fix

* fix

* fix docstring

* update according to torch default_collate

* add unittest

* fix

* fix lint

* fix

* fix

* fix test

* Update

* Update

* Update
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* wip

* udp

* upd

* fix typo

* lint

* lint

* upd

* upd

* lint

* lint

* upd

* upd

* tftest

* fix

* fallback numpy

* fix tf

* docstring
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* WIP

* finish lowmem impl; benchmarking

* wip

* wip

* fix benchmarks

* fix bug in searchsorted

* update readme

* update

* lint and ogb dependency

* add flags to to_homogeneous

* fix docstring

* address comments

Co-authored-by: Zihao Ye <expye@outlook.com>

* delete shared memory when receive signal.

* rename.

* fix lint.

* fix lint.

* fix compile.

* Fix.

* we need to report error if the shared memory exist.

* disable tensorflow test for shared memory.

* revert.
Co-authored-by: Ubuntu <ubuntu@ip-172-31-2-202.us-west-1.compute.internal>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* first commit

* some thoughts

* move around

* more commit

* more fixes

* now it uses torch allocator

* fix symbol export error

* fix

* fixes

* test fix

* add script

* building separate library per version

* fix for vs2019

* more fixes

* fix on windows build

* update jenkinsfile

* auto copy built dlls for windows

* lint and installation guide update

* fix

* specify conda environment

* set environment for ci

* fix

* fix

* fix

* fix again

* revert

* fix cmake

* fix

* switch to using python interpreter path

* remove scripts

* debug

* oops sorry

* Update index.rst

* Update index.rst

* copies automatically, no need for this

* do not print message if library not found

* tiny fixes

* debug on nightly

* replace add_compile_definitions to make CMake 3.5 happy

* fix linking to wrong lib for multiple pytorch envs

* changed building strategy

* fix nightly

* fix windows

* fix windows again

* setup bugfix

* address comments

* change README

* upd cmake

* upd

* format

* add machine name

* update scripts

* update script

* test commit

* change run.sh

* model acc bench for gcn and sage

* get basic pipeline setup for local benchmarking

* try to bridge pytest with asv

* fix deps

* move asv to other folders

* move dir

* update script

* new setup

* delete useless file

* delete outputs

* remove dependency on pytest

* update script

* test commit

* stuck by torch version in dgl-ci-gpu

* update readme

* update asv conf

* missing files

* remove the old regression folder

* api bench

* add batch api bench
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* Update

* Update

* upd

* upd

* update

* upd

* upd

* upd

* fix

* lint

* lint

* pylint

* doc

* support AVX512

* env DGL_CPU_INTEL_KERNEL_ENABLED=1

* env DGL_CPU_INTEL_KERNEL_LOG=1

* Add unittest test_spmm.cc
Co-authored-by: Izabela Mazur <izabela.mazur@intel.com>
Co-authored-by: Michal Szarmach <michal.szarmach@intel.com>

Review patch

* Disable copying for anywhere but the GPU

* Remove unused import and remove references to transferring from the GPU from the docs

* Skip gpu test in cpu mode
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* check whether the original labels are valid

* add unit test for gin dataset

* bug of asscalar in mxnet<=1.6

* mxnet<=1.6 asscalar requires ndarray to be shaped (1,)

* skip gpu while testing datasets

* Update test_data.py

* test of gin dataset takes too much time

* Add async transferer class

* Add async ndarray copy interface

* Add python bindings

* Fix comment

* Add python class

* Fix linting issues

* Add python unit test

* Update python interface

* move async_transferer to cuda only directory

* Fix linting issue

* Move out of contrib

* Add doc strings

* Move test compute from backend

* Update comment

* Fix test naming

* Fix argument usage

* Wrap/unwrap backend parameters

* Move to dataloading

* Move to 'dataloading'

* Make GPU/CPU compatible

* Fix unit tests

* Add docs

* Use only backend interface for datamovement in unit test

* udp

* add test

* udp

* fix mxnet

[HeteroGraph] Fix the failure of apply_nodes when the input function changes feature size for all nodes (#2223)

* Fix

* Fix

* fix cumsum

* udp
Co-authored-by: Zihao <expye@outlook.com>

* fix degree bucket edge ordering

* unit test

* fix

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* fix

* upd

* upd

* upd

* upd

* fix

* upd
Co-authored-by: VoVAllen <jz1749@nyu.edu>

* fix flatten not wrapping unit graph

* fix doc

This reverts commit 33a8bb93

.
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* bug fixes

* remove __deepcopy__; not sure what the behavior should be

* lint

* skip gpu test

* fix

* fix dist dataloader

* add comment

* remove assert

* workaround

* Allow Test for Traversal on GPU Graphs
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* upd

* upd

* add feature utils and add test for feature norm

* Add docstring and test

* upd

* dis able some test

* Update

* update doc string

* update
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal>

Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal>

* [Bug] add_edges() crashes if the input tensor is empty

* lint

* fix

* Update frame.py

* add unit test

* fix test

* fix

* fix

* fix
Co-authored-by: Quan Gan <coin2028@hotmail.com>

* [Windows] Work around the bug from CL 19.10

* fix

* add doc.

* update DistGraph.

* add DistTensor.

* update DistEmbedding.

* add partition.py

* add sampling.

* fix.

* add graph partition book and create a base class.

* fix test.

* add rst.

* update doc rst.

* update.

* fix.

* fix docs

* update distributed tensor and embeddings.

* add checks.

* update DistGraph.

* update initialization.

* fix graph partition book.

* update graph partition book.

* update partition.

* update partition.

* fix.

* add example code.

* update DistGraph

* Update python/dgl/distributed/dist_context.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_context.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_dataloader.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_dataloader.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Update python/dgl/distributed/dist_dataloader.py
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* update initialize.

* update dataloader.

* update distgraph.

* update DistGraph.

* update DistTensor.

* update.

* more updates.

* fix lint.

* add num_nodes and num_edges
Co-authored-by: Chao Ma <mctt90@gmail.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>