GitLab

* Update

* Update

* Update

* Update

* Update test_transform.py
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>

* [Dist] fix etype issue in dist part pipeline

* add comments

* [Dist] reduce startup overhead: enable to save in specified formats

* [Dist] reduce startup overhead: sort partitions when generating

* sort csc/csr only whenmultiple etypes

* refine

* add a standalone tool for change etypes to canonical etypes in part config

* [Feature] enable to save graphs in multiple formats

* use StreamWithCount to accomodate formats

* fix lint

* fix dynamic cast issue

* fix lint

* refine docstring and code naming

* update docstring

* [Dist] decouple num_chunks and num_parts for graphs with edge feature

* fix test failure

* [Dist] Reduce peak memory in DistDGL: avoid validation, release memory once loaded

* remove orig_id from ndata/edata for partition_graph()

* delete orig_id from ndata/edata in dist part pipeline

* reduce dtype size and format before saving graphs

* fix lint

* ETYPE requires to be int32/64 for CSRSortByTag

* fix test failure

* refine

* metapath2vec package

* fix bugs --metapath2vec package

* add unittest and fix bugs

* fix pyling messages

* del init.py

* fix bugs

* modify metapath2vec and add deepwalk

* metapath2vec module

* Update

* Update

* rollback to initial metapath2vec

* Update

* Update

* Update

* Update
Co-authored-by: Rhett Ying <85214957+Rhett-Ying@users.noreply.github.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>

* [Dist] enable iterate multiple dist dataloaders simultaneously

* format file

* add support for any number of dataloaders

* fix lint

* refine code

Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>

* refactor the function and module of laplacian_pe

* add blank lines between design doc

* 1st approving review

* update the unittest

* fix lint issues

* fix trailing space

* update by mufei's comments and fix backend bugs

* del test file
Co-authored-by: rudongyu <ru_dongyu@outlook.com>
Co-authored-by: Rhett Ying <85214957+Rhett-Ying@users.noreply.github.com>

* Creating ParMETIS wrapper script to run parmetis using one script from user perspective

* Addressed all the CI comments from PR https://github.com/dmlc/dgl/pull/4529

* Addressing CI comments.

* Isort, and black changes.

* Replaced python with python3

* Replaced single quote with double quotes per suggestion.

* Removed print statement

* Addressing CI Commets.

* Addressing CI review comments.

* Addressing CI comments as per chime discussion with Rui

* CI Comments, Black and isort changes

* Align with code refactoring, black, isort and code review comments.

* Addressing CI review comments, and fixing merge issues with the master branch

* Updated with proper unit test skip decorator

* Added support for edge features.

* Added comments and removing unnecessary print statements.

* updated data_shuffle.py to remove compile error.

* Repaled python3 with python to match CI test framework.

* Removed unrelated files from the pull request.

* Isort changes.

* black changes on this file.

* Addressing CI review comments.

* Addressing CI comments.

* Removed duplicated and resolved merge conflict code.

* Addressing CI Comments from Rui.

* Addressing CI comments, and fixing merge issues.

* Addressing CI comments, code refactoring, isort and black

* first commit

* add test

* fixes

* ah this is how you skip setup

* fix

* ugh

* address comments

* i like black

* [Sparse] Add SparseMatrix unittest and fix docstring problem

* Minor fix

* Update

* check permission

* rm future annonations

* Skip create_from_csr and create_from_csc tests because Pytorch 1.9.0 does not have torch.sparse_csr_tensor
Co-authored-by: Israt Nisa <nisisrat@amazon.com>

* Add elementwise operators for diagonal matrix

* minor

* resolve ambiguity of ops

* lint check

* lint check

* lint check
Co-authored-by: Israt Nisa <nisisrat@amazon.com>

* metapath2vec package

* fix bugs --metapath2vec package

* add unittest and fix bugs

* fix pyling messages

* del init.py

* fix bugs

* modify metapath2vec and add deepwalk

* deepwalk module

* del metapath2vec files

* Update

* Update

* Update

* Update

* Update

* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* sddmm init

* SDDMM with N-D nonzero values

* drop support for vector shaped non zero elements

* address comments

* skip cpu test

* skip GPU test too
Co-authored-by: Israt Nisa <nisisrat@amazon.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* [Dist] enable to partition many chunks into less partitions via pipeline

* refine

* add meta file for num_parts, add more tests, refine docstring

* remove args.num_parts

* create pydantic class for partition metadata

* refine

* rename json file

* [Dist] save original node/edge IDs into separate files

* separate nids and eids

* Update

* lint

* Fix

* Update

* Update

* Update

* update

* Fix

* Update

* Fix

* Fix

* Fix

* CI

* Update

* Update

* Update

* update test
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>

* fix test stream

* init cusparse handle

* [Sparse] Add reduction operators

* Fix linting problem

* Fix linting problem

* Fix linting problem

* Fix docstring

* Fix test cases

* Fix linting problem

* Skip reduction unittests

* initial commit

* address comments

* lint check
Co-authored-by: Israt Nisa <nisisrat@amazon.com>

* [Sparse] Add Transposition

* Fix docstring

* Fix linting problem

* Minor fix

* Minor fix
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* get_more_logs

* Update cugraph_unit_test.sh

* Update test_basics.py

* Update cugraph_unit_test.sh

* Update tests/cugraph/test_basics.py
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* [CI] Enable DGL cugaph nightly CI

* fix build issue

* remove runtime

* disable warning for tensorpipe

* fix warning

* enable lint check for cuh files

* resolve comments

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>

* fix

* Update hetero.py

* why did i remove this
Co-authored-by: Xin Yao <xiny@nvidia.com>

* updates

* Enable caching C++ result

* Add missing docstring

* Remove unused function

* Add unit test

* Address comments

* rename `DLContext` to `DGLContext`

* rename `kDLGPU` to `kDLCUDA`

* replace DLTensor with DGLArray

* fix linting

* Unify DGLType and DLDataType to DGLDataType

* Fix FFI

* rename DLDeviceType to DGLDeviceType

* decouple dlpack from the core library

* fix bug

* fix lint

* fix merge

* fix build

* address comments

* rename dl_converter to dlpack_convert

* remove redundant comments

This reverts commit ec171c64.

* Added cugraph nightly scripts

* Removed nvcr.io//nvidia/pytorch:22.04-py3 reference
Co-authored-by: Rhett Ying <85214957+Rhett-Ying@users.noreply.github.com>

* add set_stream

* add .record_stream for NDArray and HeteroGraph

* refactor dgl stream Python APIs

* test record_stream

* add unit test for record stream

* use pytorch's stream

* fix lint

* fix cpu build

* address comments

* address comments

* add record stream tests for dgl.graph

* record frames and update dataloder

* add docstring

* update frame

* add backend check for record_stream

* remove CUDAThreadEntry::stream

* record stream for newly created formats

* fix bug

* fix cpp test

* fix None c_void_p to c_handle