GitLab

* add knn benchmark result

* update

* update knn benchmark to test on multiple algorithms

* update benchmark script

* update

Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* [Feature] Add dgl.reorder() to re-order graph according to specified strategy

* fix unit test failure for metis reorder

* fix unit test failure on mxnet_cpu

* refine unit test for dgl.reorder

* fix unit test failure on mxnet

* fix array_equal error for mxnet unit test

* fix unit test failure for mxnet

* convert metis output to numpy array explicitly
Co-authored-by: Tong He <hetong007@gmail.com>

Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* add instructions for VC2015 redist install

* fix typo

* Fix example datasplitting

* Remove left-over split parameter

* Remove unused parameter

* Set epoch when using multiple GPUs
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

* fix

* lint

* Revert "lint"

This reverts commit 263f913f02a9ece8491e9a9f812e50892da899ba.
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* add knn benchmark result

* update

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* fix

* remove nvidiasmi

* fix

* fix docs

* fix

* fix

* 1

* fix

* remove

* skip deprecated kernel

* fix

* Revert "skip deprecated kernel"

This reverts commit c5ceb7f60dbbaf065b81cc3680757fd611d90ad3.

* fix

* skip deprecated kernels

* Revert "skip deprecated kernels"

This reverts commit 2ee7f212d11d0858a0f863349a5e02ad04e4bc3c.

* fix

* update docstrings and tidy code

* add docs

* address comments

* Update __init__.py

* address comments

* csr and csc creation

* fix

* fix

* fixes to adj transpose

* fine

* raise error if indptr did not match number of nodes

* fix

* huh?

* oh
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

[Bug fix] Use shared memory for grad sync when NCCL is not avaliable as PyTorch distributed backend. (#3034)

* Use shared memory for grad sync when NCCL is not avaliable as PyTorch distributed backend.

Fix small bugs and update unitests

* Fix bug

* update test

* update test

* Fix unitest

* Fix unitest

* Fix test

* Fix

* simple update
Co-authored-by: Ubuntu <ubuntu@ip-172-31-24-212.ec2.internal>

Co-authored-by: maqy1995 <maqingyun0718>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* update

* update

* update

* update

* lint

* lint

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* lint

* update

* clone

* update

* update

* update

* update

* replace idarray with ndarray

* refactor cpp part

* refactor python part

* debug

* refactor interface

* test and doc

* lint and test

* lint

* fix

* fix

* fix

* const

* doc

* fix

* fix

* fix

* fix

* fix & doc

* fix

* fix

* update

* update

* update

* merge

* doc

* doc

* lint

* fix

* more tests

* doc

* fix

* fix

* update

* update

* update

* fix

* fix
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* Fix example

* Remove register_data_args and revert  to dataset
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* add seal example

* 1. add paper infomation in examples/README
2. adjust codes
3. option test

* use latest `to_simple` to replace coalesce graph function

* remove outdated codes

* remove useless comment

* Node2vec
1.implement node2vec random walk c++ op
2.implement node2vec model
3.implement node2vec example

* add CMakeLists file modify

* refine c++ codes

* refine c++ codes

* add missing whitespace

* refine python codes

* add codes

* add node2vec_impl.h

* fix codes

* fix code style problem

* fixes

* remove

* lots of changes

* add benchmark

* fixes
Co-authored-by: smilexuhc <smile.xuhc@gmail.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* add unit test

* Extend NDArrayPartition object

* Add method for setting embedding, and improve documentation

* Sync before returning

* Use name unique to sparse embedding class to avoid delete
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* Added heterograph support SpMM, SDDMM

* bug fix cuda stream

* add cudaStrm destroy and fix whitespace

* Added heterograph support SpMM, SDDMM

* bug fix cuda stream

* add cudaStrm destroy and fix whitespace

* changed max stream = 1

* Fixed ctx

* using default stream

* Added heterograph support SpMM, SDDMM

* bug fix cuda stream

* add cudaStrm destroy and fix whitespace

* changed max stream = 1

* Fixed ctx

* using default stream

* fix bug in copy_rhs

* changed by mistake

* minor datatype change

* added datatype check
Co-authored-by: Israt Nisa <nisisrat@amazon.com>

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Update

* Fix subgraph tests

* Capture stdout for distributed test

* Capture stdout for distributed test

* Update

* Update

* Update

* Update subgraph.cc
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-17.us-west-2.compute.internal>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* [Feature] add positive negative statistics

* [Feature] add permission information and fix import problem

* fix backend incompatible problem

* modify random split to remove sklearn usage

* modify file read to remove pandas usage

* add datasets into doc

* add random seed in data splitting

* add dataset unit test

* usage permission information update
Co-authored-by: zhjwy9343 <6593865@qq.com>

* fix

* remove nvidiasmi

* fix

* fix docs

* fix

* fix

This reverts commit cba5b188

.
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* Update cmake to build Ampere

* Fix version check

* add multigpu sage

* Fix #2808

* multigpu test

* try

* fix remote url

* fix

* Revert "Fix #2808"

This reverts commit 19741f7d546df34b33759d8d0c9a85992ebc6118.

* add back thread_wrapped_func for backward compatibility

* fix

* fix multigpu

* print nvidia-smi

* use new docker image

* fix

* fix

* add ogb mag

* [Feature] add positive negative statistics

* [Feature] add permission information and fix import problem

* fix backend incompatible problem

* modify random split to remove sklearn usage

* modify file read to remove pandas usage

* add datasets into doc
Co-authored-by: zhjwy9343 <6593865@qq.com>

* add.

* fix.

* fix.

* fix.

* fix.

* add tests.

* support node split and edge split.

* support 1 partition.

* add tests.

* fix.

* fix test.

* use hierarchical partition.

* add check.
Co-authored-by: Zheng <dzzhen@3c22fba32af5.ant.amazon.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-22-57.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-71-112.ec2.internal>

Co-authored-by: zhjwy9343 <6593865@qq.com>

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* [Example] GCN on ogbn-arxiv dataset

* Add README.md

* Update GCN implementation on ogbn-arxiv

* Update GCN on ogbn-arxiv

* Fix typo

* Use evaluator to get results

* Fix duplicated

* Fix duplicated

* Update GCN on ogbn-arxiv

* Add GAT for ogbn-arxiv

* Update README.md

* Update GAT on ogbn-arxiv

* Update README.md

* Update README

* Update README.md

* Update README.md

* Add GAT implementation for ogbn-proteins

* Add GAT implementation for ogbn-proteins

* Add GAT implementation for ogbn-proteins

* Add GAT implementation for ogbn-proteins

* Add GAT implementation for ogbn-proteins

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Update examples for ogbn-arxiv

* Add examples for ogbn-products.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-proteins.

* Update examples for ogbn-products.

* Update examples for ogbn-products.

* Update examples for ogbn-arxiv.

* Update examples for ogbn-arxiv.

* Update examples for ogbn-arxiv.

* Update examples for ogbn-proteins.

* Update examples for ogbn-products.

* Update examples for ogbn-proteins.

* Update examples for ogbn-arxiv.

* Update examples for ogbn-proteins.

* Update README.md

* [Example] ogbn-arxiv & ogbn-proteins

* [Example] ogbn-arxiv & ogbn-proteins

* [Example] ogbn-arxiv & ogbn-proteins

* [Example] ogbn-arxiv & ogbn-proteins
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>

* Fix sparse optimizer to wait on copies to the CPU

* Fix linting

* Fix typo
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>