1. 01 Jul, 2019 1 commit
    • HQ's avatar
      [Model] DiffPool with both DGL and tensorized operatons (#665) · 684a61ad
      HQ authored
      * diffpool original file added
      
      * make diffpool fuse up and running
      
      * minor tweak on tu dataset statistics method
      
      * fix tu
      
      * break
      
      * delete break
      
      * pre_org
      
      * diffpool fuse reorg
      
      * fix random shuffling
      
      * fix bn
      
      * add dgl layers
      
      * early stopping
      
      * add readme
      
      * fix
      
      * add diffpool preprocess script
      
      * tweak tu dataset
      
      * tweak
      
      * tweak
      
      * tweak
      
      * tweak
      
      * tweak
      
      * preprocess dataset
      
      * fix early stopping
      
      * fix
      
      * fix
      
      * fix
      
      * tweak
      
      * readme
      
      * code review
      
      * code review
      
      * dataset code review
      
      * update README
      
      * code review
      
      * tu doc
      684a61ad
  2. 20 Jun, 2019 1 commit
  3. 15 Jun, 2019 1 commit
  4. 14 Jun, 2019 1 commit
  5. 12 Jun, 2019 1 commit
  6. 10 Jun, 2019 1 commit
    • Da Zheng's avatar
      [BUGFIX] extand DGLGraph graph_data. (#632) · 411bcd7e
      Da Zheng authored
      * enable tutorial test in CI.
      
      * extand DGLGraph graph_data.
      
      * update doc.
      
      * Revert "enable tutorial test in CI."
      
      This reverts commit cd774067180922bb6ae979bde4aecbffc61c8147.
      
      * accept DGLGraph in graph store.
      411bcd7e
  7. 09 Jun, 2019 3 commits
    • Da Zheng's avatar
      Define node/edge Ids in NodeFlow more clearly (#628) · fc7775a2
      Da Zheng authored
      * add tests.
      
      * distinguish layer-local nid and nodeflow nid.
      
      * use numpy assert_array_equal and assert_allclose
      
      * fix map_from_parent_nid
      
      * fix test
      
      * fix test.
      
      * renmae remap.
      
      * update doc.
      
      * update doc.
      
      * update doc.
      
      * fix test.
      
      * fix test.
      fc7775a2
    • Minjie Wang's avatar
      [Examples] Run all the examples (#623) · dec8b49b
      Minjie Wang authored
      * all pytorch examples
      
      * scan through mxnet examples
      
      * change reddit data
      
      * tweak numerical range for unittest
      
      * fix ci
      
      * fix ci
      
      * fix
      
      * add seed to workaround
      dec8b49b
    • Lingfan Yu's avatar
      [Model] Update GAT model code (#622) · 74e13eea
      Lingfan Yu authored
      * fix gat code to use latest edge softmax module
      
      * avoid transpose
      
      * update README
      
      * use edge_softmax op
      
      * mxnet edge softmax op
      
      * mxnet gat
      
      * update README
      
      * fix unittest
      
      * fix ci
      
      * fix mxnet nn test; relax criteria for prod reducer
      74e13eea
  8. 02 Jun, 2019 1 commit
    • Minjie Wang's avatar
      [Graph] Add API to convert graph to simple graph (#587) · 01a4cc5b
      Minjie Wang authored
      * to simple
      
      * WIP: multigraph flag
      
      * graph index refactor; pass basic testing
      
      * graph index refactor; pass basic testing
      
      * fix bug in to_simple; pass torch test
      
      * fix mx utest
      
      * fix example
      
      * fix lint
      
      * fix ci
      
      * poke ci
      
      * poke ci
      
      * WIP
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * change ci workspace
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * delete ci
      
      * use enum for multigraph flag
      01a4cc5b
  9. 30 May, 2019 2 commits
  10. 28 May, 2019 1 commit
  11. 26 May, 2019 1 commit
  12. 25 May, 2019 1 commit
  13. 24 May, 2019 1 commit
  14. 23 May, 2019 4 commits
  15. 21 May, 2019 1 commit
    • Da Zheng's avatar
      [API] update graph store API. (#549) · b2b8be25
      Da Zheng authored
      * add init_ndata and init_edata in DGLGraph.
      
      * adjust SharedMemoryGraph API.
      
      * print warning.
      
      * fix comment.
      
      * update example
      
      * fix.
      
      * fix examples.
      
      * add unit tests.
      
      * add comments.
      b2b8be25
  16. 20 May, 2019 1 commit
    • Da Zheng's avatar
      [BUGFix] Improve multi-processing training (#526) · cdfca992
      Da Zheng authored
      * fix.
      
      * add comment.
      
      * remove.
      
      * temp fix.
      
      * initialize for shared memory.
      
      * fix graphsage.
      
      * fix gcn.
      
      * add more unit tests.
      
      * add more tests.
      
      * avoid creating shared-memory exclusively.
      
      * redefine remote initializer.
      
      * improve initializer.
      
      * fix unit test.
      
      * fix lint.
      
      * fix lint.
      
      * initialize data in the graph store server properly.
      
      * fix test.
      
      * fix test.
      
      * fix test.
      
      * small fix.
      
      * add comments.
      
      * cleanup server.
      
      * test graph store with a random port.
      
      * print.
      
      * print to stderr.
      
      * test1
      
      * test2
      
      * remove comment.
      
      * adjust the initializer signature.
      cdfca992
  17. 16 May, 2019 1 commit
  18. 07 May, 2019 1 commit
    • Da Zheng's avatar
      [Model] add multiprocessing training with sampling. (#484) · 3a1392e6
      Da Zheng authored
      * reorganize sampling code.
      
      * add multi-process training.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * add new API in graph store.
      
      * update barrier impl.
      
      * support both local and distributed training.
      
      * fix multiprocess train.
      
      * fix.
      
      * fix barrier.
      
      * add script for loading data.
      
      * multiprocessing sampling.
      
      * accel training.
      
      * replace pull with spmv for speedup.
      
      * nodeflow copy from parent with context.
      
      * enable GPU.
      
      * fix a bug in graph store.
      
      * enable multi-GPU training.
      
      * fix lint.
      
      * add comments.
      
      * rename to run_store_server.py
      
      * fix gcn_cv.
      
      * fix a minor bug in sampler.
      
      * handle error better in graph store.
      
      * improve graphsage_cv for distributed mode.
      
      * update README.
      
      * fix.
      
      * update.
      3a1392e6
  19. 28 Apr, 2019 1 commit
  20. 25 Apr, 2019 1 commit
  21. 23 Apr, 2019 1 commit
  22. 22 Apr, 2019 2 commits
  23. 18 Apr, 2019 1 commit
    • Aymen Waheb's avatar
      [Model] Add edge dropout to APPNP (#493) · 3f464591
      Aymen Waheb authored
      * [Model] Add edge dropout to APPNP
      
      [Model] Add edge dropout to APPNP
      
      * [Model] Refactor the sampling examples (#498)
      
      * reorganize sampling code.
      
      * speedup gcn_ns.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * undo the modification.
      
      * accel training.
      
      * update readme.
      
      * [Model] Add edge dropout to APPNP
      
      [Model] Add edge dropout to APPNP
      
      update
      3f464591
  24. 17 Apr, 2019 2 commits
    • Da Zheng's avatar
      [Model] Refactor the sampling examples (#498) · 6124667f
      Da Zheng authored
      * reorganize sampling code.
      
      * speedup gcn_ns.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * undo the modification.
      
      * accel training.
      
      * update readme.
      6124667f
    • kitaev-chen's avatar
      [Model] Add GIN Model (#471) · a3febc06
      kitaev-chen authored
      * add gin model
      
      * convert dataset.py to data_ont_the_fly way and put it into dgl.data module
      
      * convert dataset.py to data_ont_the_fly way and put it into dgl.data module
      python code checked
      
      * modified document and reference TUDataset; checked python part and bypass cpp part due to error
      
      * change tensor to numpy in dataset and transform in collate@Dataloader
      
      * Change minor format issue
      
      Change minor format issue
      
      * moved logging; adjusted tqdm etc
      a3febc06
  25. 16 Apr, 2019 1 commit
    • Chao Ma's avatar
      [RPC] Refactoring networking APIs (#496) · b89dcce1
      Chao Ma authored
      * Refactoring network API
      
      * update demo
      
      * update
      
      * update demo
      
      * update demo
      
      * add num_sender
      
      * update
      
      * fix lint
      
      * fix lint
      
      * fix lint
      
      * update
      b89dcce1
  26. 11 Apr, 2019 2 commits
  27. 10 Apr, 2019 1 commit
  28. 09 Apr, 2019 1 commit
    • Aymen Waheb's avatar
      [Model] Add APPNP model (#480) · fa887f69
      Aymen Waheb authored
      * [Model] Add APPNP model
      
      * update
      
      * Revert "update"
      
      This reverts commit a8e42d19c8b421fb382305a8f04d7426e78ea53c.
      
      * update
      
      * Update appnp.py
      fa887f69
  29. 05 Apr, 2019 1 commit
  30. 03 Apr, 2019 1 commit
    • Chao Ma's avatar
      Add demo for distributed sampler (#474) · da3ab84c
      Chao Ma authored
      * add C++ rpc infrastructure and distributed sampler
      
      * update
      
      * update lint
      
      * update lint
      
      * update lint
      
      * update
      
      * update
      
      * update
      
      * updare
      
      * update
      
      * update
      
      * update
      
      * update serialize and unittest
      
      * update serialize
      
      * lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update unittest
      
      * put Finalize() to __del__
      
      * update unittest
      
      * update
      
      * delete buffer in Finalize
      
      * update unittest
      
      * update unittest
      
      * update unittest
      
      * update unittest
      
      * update
      
      * update
      
      * fix small bug
      
      * windows socket impl
      
      * update API
      
      * fix bug in serialize
      
      * fix bug in serialzie
      
      * set parent graph
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * fix lint
      
      * fix
      
      * fix windows compilation error
      
      * fix windows error
      
      * change API to lower-case
      
      * update test
      
      * fix typo
      
      * update
      
      * add SamplerPool
      
      * add SamplerPool
      
      * update
      
      * update test
      
      * update
      
      * update
      
      * update
      
      * update
      
      * add example
      
      * update
      
      * update
      
      * add distributed sampler demo
      
      * add index
      
      * update demo of distributed sampler
      
      * fix lower-case
      
      * print subg index
      
      * update README.md
      
      * update
      
      * remove --gpu args
      da3ab84c
  31. 29 Mar, 2019 1 commit
    • Quan (Andy) Gan's avatar
      [Model][Feature] PinSage & Random Walk with Restart (#453) · 6066fee9
      Quan (Andy) Gan authored
      * random walk traces generation
      
      * remove outdated comments
      
      * oops put in the wrong place
      
      * explicit inline
      
      * moving rand_r to util
      
      * pinsage-like model on movielens
      
      * the code runs now
      
      * support cuda
      
      * using readonly graph
      
      * moving random walk to public function
      
      * per-thread seed and openmp support
      
      * pinsage-like model on movielens
      
      * the code runs now
      
      * support cuda
      
      * using readonly graph
      
      * using C random walk
      
      * removing profile decorators
      
      * param initialization
      
      * no grad
      
      * leaky relu fixes everything
      
      * train and save
      
      * WIP
      
      * WIP
      
      * WIP
      
      * seems to work
      
      * evaluation output
      
      * swapping order of val/test and train
      
      * debug
      
      * hyperparam tuning
      
      * prior/training dataset split changes
      
      * random walk reorg
      
      * random walk with restart
      
      * signed comparison fix
      
      * migrating random walk to nodeflow
      
      * Revert "migrating random walk to nodeflow"
      
      This reverts commit f2565347cced7c912a58a529b257c033d9f375b7.
      
      * add README and remove dataset
      
      * new endpoint
      
      * lint
      
      * lint x2
      
      * oops forgot test
      
      * including bpr - better for baseline
      
      * addressing fixes
      
      * throwing random walks out from SamplerOp class
      
      * forgot to move RandomWalk; why did this even work?
      
      * removing legacy garbage
      
      * add todo
      
      * address comments
      
      * stupid bug fix
      
      * call ndarrayvector converter to handle traces
      6066fee9