GitLab

* add cub; array cumsum

* CSRSliceRows

* fix warning

* operator << for ndarray; CSRSliceRows

* add CSRIsSorted

* add csr_sort

* inplace coosort and outplace csrsort

* WIP: coo is sorted

* mv cuda_utils

* add AllTrue utility

* csr sort

* coo sort

* coo2csr for sorted coo arrays

* CSRToCOO from sorted

* pass tests for the new kernel changes

* cannot use inplace sort

* lint

* try fix msvc error

* Fix g.copy_to and g.asnumbits; ToBlock no longer uses CSC

* stash

* revert some hack

* revert some changes

* address comments

* fix

* fix to_block unittest

* add todo note

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* WIP: rpc components

* client & server

* move network package to rpc

* fix include

* fix compile

* c api

* wip: test

* add basic tests

* missing file

* [RPC] Zero copy serializer (#1517)

* zerocopy serialization

* add test for HeteroGraph

* fix lint

* remove unnecessary codes

* add comment

* lint

* lint

* disable pylint for now

* add include for win

* windows guard

* lint

* lint

* skip test on windows

* refactor

* add comment

* fix

* comment

* 1111

* fix

* Update Jenkinsfile

* [RPC] Implementation of RPC infra (#1544)

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* remove client.cc and server.cc

* fix lint

* update

* update

* fix linr

* update

* fix lint

* update

* update

* update

* update

* update

* update

* update test

* update

* update test

* update

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* update comment

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* fix lint

* fix lint

* update

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* update
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* initial version from distributed training.

This is copied from multiprocessing training.

* modify for distributed training.

* it's runnable now.

* measure time in neighbor sampling.

* simplify neighbor sampling.

* fix a bug in distributed neighbor sampling.

* allow single-machine training.

* fix a bug.

* fix a bug.

* fix openmp.

* make some improvement.

* fix.

* add prepare in the sampler.

* prepare nodeflow async.

* fix a bug.

* get id.

* simplify the code.

* improve.

* fix partition.py

* fix the example.

* add more features.

* fix the example.

* allow one partition

* use distributed kvstore.

* do g2l map manually.

* fix commandline.

* a temp script to save reddit.

* fix pull_handler.

* add pytorch version.

* estimate the time for copying data.

* delete unused code.

* fix a bug.

* print id.

* fix a bug

* fix a bug

* fix a bug.

* remove redundent code.

* revert modify in sampler.

* fix temp script.

* remove pytorch version.

* fix.

* distributed training with pytorch.

* add distributed graph store.

* fix.

* add metis_partition_assignment.

* fix a few bugs in distributed graph store.

* fix test.

* fix bugs in distributed graph store.

* fix tests.

* remove code of defining DistGraphStore.

* fix partition.

* fix example.

* update run.sh.

* only read necessary node data.

* batching data fetch of multiple NodeFlows.

* simplify gcn.

* remove unnecessary code.

* use the new copy_from_kvstore.

* update training script.

* print time in graphsage.

* make distributed training runnable.

* use val_nid.

* fix train_sampling.

* add distributed training.

* add run.sh

* add more timing.

* fix a bug.

* save graph metadata when partition.

* create ndata and edata in distributed graph store.

* add timing in minibatch training of GraphSage.

* use pytorch distributed.

* add checks.

* fix a bug in global vs. local ids.

* remove fast pull

* fix a compile error.

* update and add new APIs.

* implement more methods in DistGraphStore.

* update more APIs.

* rename it to DistGraph.

* rename to DistTensor

* remove some unnecessary API.

* remove unnecessary files.

* revert changes in sampler.

* Revert "simplify gcn."

This reverts commit 0ed3a34ca714203a5b45240af71555d4227ce452.

* Revert "simplify neighbor sampling."

This reverts commit 551c72d20f05a029360ba97f312c7a7a578aacec.

* Revert "measure time in neighbor sampling."

This reverts commit 63ae80c7b402bb626e24acbbc8fdfe9fffd0bc64.

* Revert "add timing in minibatch training of GraphSage."

This reverts commit e59dc8957a414c7df5c316f51d78bce822bdef5e.

* Revert "fix train_sampling."

This reverts commit ea6aea9a4aabb8ba0ff63070aa51e7ca81536ad9.

* fix lint.

* add comments and small update.

* add more comments.

* add more unit tests and fix bugs.

* check the existence of shared-mem graph index.

* use new partitioned graph storage.

* fix bugs.

* print error in fast pull.

* fix lint

* fix a compile error.

* save absolute path after partitioning.

* small fixes in the example

* Revert "[kvstore] support any data type for init_data() (#1465)"

This reverts commit 87b6997b

.

* fix a bug.

* disable evaluation.

* Revert "Revert "[kvstore] support any data type for init_data() (#1465)""

This reverts commit f5b8039c6326eb73bad8287db3d30d93175e5bee.

* support set and init data.

* support set and init data.

* Revert "Revert "[kvstore] support any data type for init_data() (#1465)""

This reverts commit f5b8039c6326eb73bad8287db3d30d93175e5bee.

* fix bugs.

* fix unit test.

* move to dgl.distributed.

* fix lint.

* fix lint.

* remove local_nids.

* fix lint.

* fix test.

* remove train_dist.

* revert train_sampling.

* rename funcs.

* address comments.

* address comments.

Use NodeDataView/EdgeDataView to keep track of data.

* address comments.

* address comments.

* revert.

* save data with DGL serializer.

* use the right way of getting shape.

* fix lint.

* address comments.

* address comments.

* fix an error in mxnet.

* address comments.

* add edge_map.

* add more test and fix bugs.
Co-authored-by: Zheng <dzzhen@186590dc80ff.ant.amazon.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-6-131.us-east-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-26-167.us-east-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-150.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-250.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-30-135.us-west-2.compute.internal>

* fix get-shape

* update

* update

* update

* update

* update

* fix typo

* update

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* update

* update

* update

* update

* fix lint

* update

* Update network.cc
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

* add init_data on client

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* fix lint

* fix lint

* update

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* fix lint

* update

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* fix lint

* new kvstore

* update

* update

* update

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* test warning

* update

* update

* udpate

* update

* update

* update

* update

* small fix

* small fix

* get group count

* update

* update

* make file

* update

* use addr

* get id

* partition book

* update

* partition

* barrier

* update

* loop count

* update

* update

* update

* update

* update

* update

* update

* update

* update

* add mxnet demo

* update ip

* update

* update

* update

* random

* update

* update

* update

* update

* update

* update

* fix lint

* fix lint

* fix lint

* API change of kvstore

* add demo for kvstore

* update

* remove duplicated log

* change queue size

* update

* update

* update

* update

* update

* update

* update

* update

* update

* fix lint

* change name

* update

* fix lint

* update

* update

* update

* update

* change message queue size to a python argument

* change default queue size to 2GB

* OMP_NUM_THREADS=1

* add multiple NICs support for kvstore

* test

* fix lint

* update

* update

* update

* update

* update

* update

* update

* fix lint

* fix lint

* update

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* fix lint

* update

* fix lint

* delete msg

* clear kv msg

* update

* update

* update

* update

* update

* update

* is not None

* update

* update

* update

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* update

* update

* update

* update

* update

* update

* API change of kvstore

* add demo for kvstore

* update

* remove duplicated log

* change queue size

* update

* update

* update

* update

* update

* update

* update

* update

* update

* fix lint

* change name

* update

* fix lint

* update

* update

* update

* update

* change message queue size to a python argument

* change default queue size to 2GB

* OMP_NUM_THREADS=1

* add multiple NICs support for kvstore

* test

* fix lint

* update

* update

* update

* update

* update

* update

* update

* fix lint

* fix lint

* update

* update

* update

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* update

* update

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* update

* update

* update

* update

* fix lint

* API change of kvstore

* add demo for kvstore

* update

* remove duplicated log

* change queue size

* update

* update

* update

* update

* update

* update

* update

* update

* update

* fix lint

* change name

* update

* fix lint

* update

* update

* update

* update

* change message queue size to a python argument

* update

* speedup

* add some comments

* fix NDArray reference

* fix lint

* capture NDArray in the closure

* Refactoring Communicator

* fix lint

* change non-const reference

* add header file

* use MemoryBuffer

* update PR

* fix bug on csr shape

* zero-copy msg_queue

* fix lint

* fix lint

* fix lint

* add header file

* fix windows build error

* fix windows build error

* update

* fix lint

* update

* fix lint

* fix lint

* add more test

* fix windows test

* update windows test

* update windows test

* update windows test

* update

* fix lint

* fix lint

* update

* update

* update

* update

* use STATUS code

* update test

* remove mem_cpy

* fix lint

* update

* finish

* ConstructNFTensor

* add test for deallocator

* update

* fix lint

* WIP: using object system for graph

* c++ side refactoring done; compiled

* remove stale apis

* fix bug in DGLGraphCreate; passed test_graph.py

* fix bug in python modify; passed utest for pytorch/cpu

* fix lint

* address comments

* WIP

* header

* WIP .cc

* WIP

* transpose

* wip

* immutable graph .h and .cc

* WIP: nodeflow.cc

* compile

* remove all tmp dl managed ctx; they caused refcount issue

* one simple test

* WIP: testing

* test_graph

* fix graph index

* fix bug in sampler; pass pytorch utest

* WIP on mxnet

* fix lint

* fix mxnet unittest w/ unfortunate workaround

* fix msvc

* fix lint

* SliceRows and test_nodeflow

* resolve reviews

* resolve reviews

* try fix win ci

* try fix win ci

* poke win ci again

* poke

* lazy multigraph flag; stackoverflow error

* revert node subgraph test

* lazy object

* try fix win build

* try fix win build

* poke ci

* fix build script

* fix compile

* add a todo

* fix reviews

* fix compile

* Change Distributed Sampler API

* fix lint

* fix lint

* update demo

* update

* update

* update

* update demo

* update demo

* Refactoring network API

* update demo

* update

* update demo

* update demo

* add num_sender

* update

* fix lint

* fix lint

* fix lint

* update

* update inner API of distributed sampler

* update

* add C++ rpc infrastructure and distributed sampler

* update

* update lint

* update lint

* update lint

* update

* update

* update

* updare

* update

* update

* update

* update serialize and unittest

* update serialize

* lint

* update

* update

* update

* update

* update

* update

* update unittest

* put Finalize() to __del__

* update unittest

* update

* delete buffer in Finalize

* update unittest

* update unittest

* update unittest

* update unittest

* update

* update

* fix small bug

* windows socket impl

* update API

* fix bug in serialize

* fix bug in serialzie

* set parent graph

* update

* update

* update

* update

* update

* update

* fix lint

* fix lint

* fix

* fix windows compilation error

* fix windows error

* change API to lower-case

* update test

* fix typo

* update

* add SamplerPool

* add SamplerPool

* update

* update test

* update

* update

* update

* update

* add example

* update

* update