GitLab

Co-authored-by: Zihao Ye <expye@outlook.com>

* Update filter code

* Add unit tests

* Fixes

* Switch to indices

* Rename functions

* Fix linting

* Fix whitespace

* Add doc

* Fix heterograph

* Change workspace allocation

* Fix linting

* Fix docs in filter.py

* Add todo
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

[bugfix] Link against pytorch library by name rather than path (attempting to fix linking issue). (#3246)

* Use library name

* fix for mac builds from source
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* add evolveGCN example

* small fix

* fix defect

* fix defect
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Add pytorch-direct version

* remove

* add documentation for UnifiedTensor

* Revert "add documentation for UnifiedTensor"

This reverts commit 63ba42644d4aba197c1cb4ea4b85fa1bc43b8849.

* alignment fix for UnifiedTensor access

* fix linting issue
Co-authored-by: shhssdm <shhssdm@gmail.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

* upd

* fix

* upd

[Tools] In `tools/launch.py`, correctly pass all DGL client/server env vars if udf is a multi-command (#3245)

* Correctly pass all DGL client/server env vars if udf is a multi-command

* Refactor to use wrap_cmd_with_local_envvars() helper fn

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Fix bug

* Fix

* Fix

* upd

* Merge some code

* lint

* Create EEG-GCNN example.

* Update README.md

* Remove gitignore file.

* Update README.md

* change 'datas' to 'datasets'.

* Change train.py to main.py

* Added an entry in the indexing page.

* State "simplified version"; change how to run.

* Fix bug in contact

* Remove paper link in reference.

* Create working branch

* Add normalization of x.

* Update paper link and tags

* Update paper link in readme

* Update readme; add patient level indices

* Update readme. Add comments to models

* Update README.md

* change to with; specify location for ch and el; move note

* fix bug for note

* Add args for models; clean code.

* delete = in readme

* Add reference for spec_coh_values

* Fix bug

* Fix

* Fix

* upd

* trigger

* Only link tensordispatcher against pytorch

* Only modify libraries when not using MSVC

* Fix dist negative data loader bug

* upd

* Fix
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* add count_nonzero function for DistTensor

* change the load method of local data
Co-authored-by: liuzichang04 <liuzichang04@meituan.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

* enable force_reload of FraudDataset

* rewrite hash_key in FraudDataset

* Added code for Rectifying (TypeError: unhashable type: 'slice') when copying file

* 1) added distributed preprocessing code to create ParMetis Input from CSV files
2) add code to run pm_dglpart on multiple machines
3) added support for recreating heteregenous graph from homo geneous graph based on dropped edges, as ParMetis currently only supports homogeneous graphs

* move to pandas

* Added comments and remove drop_duplicates as it was redundant

* Addressed Pr Comments

* Rename variable

* Added comment

* Added comment

* updated ReadMe
Co-authored-by: Ankit Garg <gaank@amazon.com>
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

* Add pytorch-direct version

* remove

* add documentation for UnifiedTensor

* Revert "add documentation for UnifiedTensor"

This reverts commit 63ba42644d4aba197c1cb4ea4b85fa1bc43b8849.

* add UnifiedTensor documentation

* Update python/dgl/contrib/unified_tensor.py
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: shhssdm <shhssdm@gmail.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

* Split out separate generators for each thread

* Amortize cost of curand_init

* Improve readability
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Refactors torch dist launcher udf-wrap code to handle more python versions

* minor changes

* Update randomwalks.py

* Update randomwalks.py

FIx lint
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* Add pytorch direct to Awesome Papers Using DGL

* update

Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>

* Add pytorch-direct version

* remove

* Add multi-gpu unified tensor test for pytorch

* relocate verification step to each process

* reduce number of workers

* add parameter
Co-authored-by: shhssdm <shhssdm@gmail.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide

* move image to s3 server.

* fix links and ref

* Hide implementations that may cause confusions to the user

* add papers

* fix number of classes in Amazon Cobuy datasets

* add two papers to Awesome paper list

* Update README.md

* add four papers

* add two papers

* Add awesome papers

* Fix index in paper list

* Add paper to paperlist

* add two papers

* add two papers

* Update README.md
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

Rewrite the multiprocessing worker pool

DGL_LOADALL=true is not used in the code anymore.

* [model] add model example GeniePath

* improvements based on feedback

* improvements based on feedback
Co-authored-by: zhjwy9343 <6593865@qq.com>

Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: zhjwy9343 <6593865@qq.com>