Commits · 45e3e9af2ca1349d36aab561cc2e8e815f3660c9 · OpenDAS / dgl

19 Nov, 2020 2 commits

[WIP] Misc Fix (#2359) · 45e3e9af
Mufei Li authored Nov 19, 2020
```
* Update

* Update

* Update
```
45e3e9af

[Doc] Chinese User Guide chapter 1 - 4 (#2351) · b0a9d16f

zhjwy9343 authored Nov 19, 2020



* [Feature] Add full graph training with dgl built-in dataset.

* [Feature] Add full graph training with dgl built-in dataset.

* [Feature] Add full graph training with dgl built-in dataset.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Fix] Add random

* [Bug] Fix batch norm error

* [Doc] Test with CN in Sphinx

* [Doc] Test with CN in Sphinx

* [Doc] Remove the test CN docs.

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Doc] fill readme with new performance results

* [Doc] Add Chinese User Guide, graph and 1.5

* [Doc] Add Chinese User Guide, graph and 1.5

* Update README.md

* [Fix] Temporary remove compgcn

* [Doc] Add CN user guide chapter2

* [Test] Tunning format

* [Test] Tunning format

* [Test] Tunning format

* [Test] Tunning format

* [Test] Tunning format

* [Test] Section headers

* [Fix] Fix format errors

* [Fix] Fix format errors

* [Fix] Fix format errors

* [Doc] Add CN-EN EN-CN links

* [Doc] Add CN-EN EN-CN links

* [Doc] Copyedit chapter2

* [Doc] Copyedit chapter2

* [Doc] Remove EN in 2.1

* [Doc] Remove EN in chapter 2

* [Doc] Copyedit first 2 sections

* [Doc] Copyedit first 2 sections

* [Doc] copyedited chapter 2 CN

* [Doc] Add chapter 3 raw texts

* [Doc] Add chapter 3 preface and 3.1

* [Doc] Add chapter 3.2 and 3.3

* [Doc] Add chapter 3.2 and 3.3

* [Doc] Add chapter 3.2 and 3.3

* [Doc] Remove EN parts

* [Doc] Copyediting 3.1

* [Doc] Copyediting 3.2 and 3.3

* [Doc] Proofreading 3.1 and 3.2

* [Doc] Proofreading 3.2 and 3.3

* [Doc] Add chapter 4 CN raw text.

* [Clean] Remove codes in other branches

* [Doc] Start to copyedit chapter 4 preface

* [Doc] copyedit CN section 4.1

* [Doc] Remove EN in User Guide Chapter 4

* [Doc] Copyedit chapter 4.1

* [Doc] copyedit cn chapter 4.2, 4.3, 4.4, and 4.5.

* [Doc] Fix errors in EN user guide graph feature and heterograph

* [Doc] 2nd round copyediting with Murph's comments

* [Doc] 3rd round copyediting with Murph's comments

* [Doc] 3rd round copyediting with Murph's comments

* [Doc] 3rd round copyediting with Murph's comments

* [Sync] syncronize with the dgl master

* [Doc] edited after Minjie's comments, 1st round

* update cub
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

b0a9d16f

18 Nov, 2020 1 commit
- Update (#2354) · 9c08cd6b
  Mufei Li authored Nov 18, 2020
  
  9c08cd6b
21 Oct, 2020 1 commit
- [Doc] Same typos as 0.5.x (#2292) · 38b3d0c4
  Seung-woo Seo authored Oct 22, 2020
```
Some of SAGEGraph equation has typos.
```
  38b3d0c4
30 Sep, 2020 1 commit

[Doc] Chinese User Guide chapter1 (#2240) · 808a3676

zhjwy9343 authored Sep 30, 2020



* [Feature] Add full graph training with dgl built-in dataset.

* [Feature] Add full graph training with dgl built-in dataset.

* [Feature] Add full graph training with dgl built-in dataset.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Fix] Add random

* [Bug] Fix batch norm error

* [Doc] Test with CN in Sphinx

* [Doc] Test with CN in Sphinx

* [Doc] Remove the test CN docs.

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Doc] fill readme with new performance results

* [Doc] Add Chinese User Guide, graph and 1.5

* [Doc] Add Chinese User Guide, graph and 1.5

* [Doc] Add Chines User Guide

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* Update README.md

* [Doc] Finalize CN user guide chapter 1

* [Doc] Finalize CN user guide chapter 1

* [Doc] Finalize CN user guide chapter 1

* [Doc] Add CN link in user guide chapter 1

* [Doc] Add CN link in user guide chapter 1

* [Fix] Temporary remove compgcn

* [Doc] Add Chines User Guide

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] user guide cn chapter 1

* [Doc] Finalize CN user guide chapter 1

* [Doc] Finalize CN user guide chapter 1

* [Doc] Finalize CN user guide chapter 1

* [Doc] Add CN link in user guide chapter 1

* update hash in 3rd party

* [Fix] copyedit some errors

* [Fix] copyedit some errors

* [Fix] copyedit some errors

* [Fix] copyedit some errors

* [Fix] copyedit some errors

* Update
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

808a3676

27 Sep, 2020 2 commits
- Update message-efficient.rst (#2247) · ee9093f5
  Mufei Li authored Sep 27, 2020
  
  ee9093f5
- [Doc] fix minibatch user guide broken code (#2233) · 6bc92068
  Quan (Andy) Gan authored Sep 27, 2020
  
  6bc92068
23 Sep, 2020 1 commit

Update (#2225) · 7e0107c3

Mufei Li authored Sep 23, 2020


Co-authored-by: Ubuntu <ubuntu@ip-172-31-52-53.us-west-2.compute.internal>

7e0107c3

20 Sep, 2020 1 commit

Master refactor split chapter2n3 (#2215) · 90d86fcb

zhjwy9343 authored Sep 20, 2020



* [Feature] Add full graph training with dgl built-in dataset.

* [Feature] Add full graph training with dgl built-in dataset.

* [Feature] Add full graph training with dgl built-in dataset.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Bug] fix model to cuda.

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Feature] Add test loss and accuracy

* [Fix] Add random

* [Bug] Fix batch norm error

* [Doc] Test with CN in Sphinx

* [Doc] Test with CN in Sphinx

* [Doc] Remove the test CN docs.

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Feature] Add input embedding layer

* [Doc] fill readme with new performance results

* [Doc] Add Chinese User Guide, graph and 1.5

* [Doc] Add Chinese User Guide, graph and 1.5

* [Doc] Refactor and split chapter 4

* [Fix] Remove CompGCN example codes

* [Doc] Add chapter 2 refactor and split

* [Fix] code format of savenload

* [Doc] Split chapter 3

* [Doc] Add introduction phrase of chapter 2

* [Doc] Add introduction phrase of chapter 2

* [Doc] Add introduction phrase of chapter 3

* Fix

* Update chapter 2

* Update chapter 3

* Update chapter 4
Co-authored-by: mufeili <mufeili1996@gmail.com>

90d86fcb

17 Sep, 2020 1 commit

[bug][doc] Fix bug in batched heterograph training documentation (#2204) · 2fbffd31

Quan (Andy) Gan authored Sep 17, 2020



* [bug][doc] Fix bug in batched heterograph training documentation

* added references of "above" with hyperlinks

* address comments

* fix API doc on EdgeDataLoader
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

2fbffd31

16 Sep, 2020 1 commit

[Doc and User Guide] Minor Fix (#2205) · f3f646bb

Mufei Li authored Sep 17, 2020



* Fix doc and user guide

* Update heterograph.py
Co-authored-by: Ubuntu <ubuntu@ip-172-31-13-9.us-west-2.compute.internal>

f3f646bb

15 Sep, 2020 1 commit
- [Doc]fix link in message passing doc (#2200) · 233e8198
  Tianjun Xiao authored Sep 15, 2020
```
* fix link in message passing doc

* more specific link
```
  233e8198
12 Sep, 2020 1 commit
- fix typo (#2185) · 5e9d2889
  Quan (Andy) Gan authored Sep 13, 2020
```
Co-authored-by: Zihao Ye <expye@outlook.com>
```
  5e9d2889
11 Sep, 2020 1 commit
- [Doc] Fix typo in dataloading.negative_sampler (#2177) · 4dae26a1
  Quan (Andy) Gan authored Sep 11, 2020
```
* fix dataloading docs

* fix another
```
  4dae26a1
29 Aug, 2020 2 commits
- rename create_format_ to create_formats_ (#2126) · 9eaace92
  Quan (Andy) Gan authored Aug 29, 2020
  
  9eaace92
- new code block style (#2113) · 745078e7
  Quan (Andy) Gan authored Aug 29, 2020
```
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
```
  745078e7
27 Aug, 2020 1 commit

[User Guide] Update distributed training code (#2114) · 2a107320

Chao Ma authored Aug 27, 2020

* check num_workers

* update

* update

* update

* update

* update

* update

* update user guide

2a107320

23 Aug, 2020 1 commit
- [Dco] Remove preface in guide (#2096) · bcff14cc
  Minjie Wang authored Aug 23, 2020
```
* fix

* fix
```
  bcff14cc
21 Aug, 2020 4 commits

[Doc] Add user guide of distributed training. (#2091) · f86a8258
Da Zheng authored Aug 21, 2020
```
* distributed APIs.

* add guide.

* add index.
```
f86a8258
[Doc] [NN] Fix message and nn user guide link (#2090) · 7ead28c3
Tianjun Xiao authored Aug 22, 2020
```
* fix user guide link

* some fix on tensorflow
```
7ead28c3

[Doc] Fix links and references in dataset user guide (#2085) · 6f26cfca

Xiangkun Hu authored Aug 21, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide

* move image to s3 server.

* fix links and ref

6f26cfca

[User Guide] Split the Graph Chapter into Multiple RST Files (#2081) · 6d212983
Mufei Li authored Aug 21, 2020
```
* Graph chapter, user guide

* Split

* Update
```
6d212983

20 Aug, 2020 2 commits
- Graph chapter, user guide (#2078) · debfd4bf
  Mufei Li authored Aug 20, 2020
  
  debfd4bf
- Fix docs (#2073) · ef78d675
  Jinjing Zhou authored Aug 20, 2020
```
* remove mxnet tutorial

* remove sse

* fix docs
```
  ef78d675
17 Aug, 2020 5 commits

[Doc/Feature] Refactor, doc update and behavior fix for graphs (#1983) · be444e52

Mufei Li authored Aug 18, 2020



* Update graph

* Fix for dgl.graph

* from_scipy

* Replace canonical_etypes with relations

* from_networkx

* Update for hetero_from_relations

* Roll back the change of canonical_etypes to relations

* heterograph

* bipartite

* Update doc

* Fix lint

* Fix lint

* Fix test cases

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Update

* Fix test

* Fix

* Update

* Use DGLError

* Update

* Update

* Update

* Update

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* rewrite sanity checks

* delete unnecessary checks

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Update

* Update

* Update

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Fix

* Update

* Fix

* Update

* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan Gan <coin2028@hotmail.com>

be444e52

[Doc] split docs to multiple rst files (#2037) · 5cb57593
Minjie Wang authored Aug 17, 2020

5cb57593

[Doc] Move image in dataset User guide to s3 server (#2033) · a9c4df67

Xiangkun Hu authored Aug 17, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide

* move image to s3 server.

a9c4df67

[Doc] fix inconsistencies in minibatch user guide (#2032) · 4f1da61b
Quan (Andy) Gan authored Aug 17, 2020

4f1da61b
[Doc] User guide section 5 and 6 (#2029) · 1f7b2195
Quan (Andy) Gan authored Aug 17, 2020
```
* [Doc] User guide section 5 and 6

* oops

* fix
```
1f7b2195

15 Aug, 2020 1 commit

[Doc] Modify the link of save_graphs and load_graphs in dataset user guide (#2027) · 62e69b67

Xiangkun Hu authored Aug 15, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide

62e69b67

14 Aug, 2020 2 commits

[Doc] Update links by :ref in dataset user guide (#2024) · f4f78803

Xiangkun Hu authored Aug 14, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

f4f78803

[Doc] Image in dataset user guide (#2018) · fe121c63

Xiangkun Hu authored Aug 14, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

fe121c63

12 Aug, 2020 1 commit

[Doc] Data pipeline User guide fix links to classes (#2006) · a7539728

Xiangkun Hu authored Aug 12, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

a7539728

11 Aug, 2020 3 commits

[Doc] Data pipeline user guide remove chapter number (#1997) · af990989

Xiangkun Hu authored Aug 11, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

af990989

[Doc] Chapter 3 Graph data input pipeline in DGL (#1995) · d090ae86

Xiangkun Hu authored Aug 11, 2020

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

d090ae86

[Doc] Message passing and NN User Guide (#1991) · e262e110

Tianjun Xiao authored Aug 11, 2020



* add message passing user gude rst

* add nn user guide
Co-authored-by: Mufei Li <mufeili1996@gmail.com>

e262e110

10 Aug, 2020 1 commit
- [Doc] Reorg doc (#1989) · c2cd6eb2
  Minjie Wang authored Aug 10, 2020
  
  c2cd6eb2