Commits · 3e72c53ae0ecd16ae057aa63e81f0c57f5828fa8 · OpenDAS / dgl

15 Jun, 2020 1 commit
- [Bug?] Fix #1563 (#1642) · 3e72c53a
  Quan (Andy) Gan authored Jun 15, 2020
  
  3e72c53a
11 Jun, 2020 3 commits
- [HeteroGraph] Improve Error Messages for find_edges (#1626) · fe207b45
  Mufei Li authored Jun 11, 2020
```
* Improve error message

* Fix

* Fix
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
```
  fe207b45
- [rpc] Move test_rpc.py to distributed and use dynamic port binding (#1623) · 0c313e51
  Chao Ma authored Jun 11, 2020
```
* update

* update

* update

* update

* update

* update

* update

* update
```
  0c313e51
- [RPC] Add send_request_to_machine() and remote_call_to_machine() (#1619) · a67ba946
  Chao Ma authored Jun 11, 2020
```
* add send_request_to_machine()

* update

* update

* update

* update

* update

* update

* fix lint

* update
```
  a67ba946
04 Jun, 2020 1 commit

[KVStore] Re-write kvstore using DGL RPC infrastructure (#1569) · 64f49703

Chao Ma authored Jun 04, 2020

* update

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* update init_data

* update server_state

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* debug init_data

* update

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* test get_meta_data

* update

* update

* update

* update

* update

* debug push

* update

* update

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* update

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* use F.reverse_data_type_dict

* update

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* fix lint

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* fix lint

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* fix lint

* update

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* fix test

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* set random seed

* update

64f49703

02 Jun, 2020 1 commit
- [Hetero] Allow Batching Graphs with Zero Nodes/Edges (#1575) · a936f9d9
  Mufei Li authored Jun 02, 2020
```
* Allow batching graphs with zero nodes and edges

* Fix the case without node/edge features

* Fix lint
```
  a936f9d9
22 May, 2020 1 commit

[RPC] New RPC infrastructure. (#1549) · 3e696922

Chao Ma authored May 22, 2020



* WIP: rpc components

* client & server

* move network package to rpc

* fix include

* fix compile

* c api

* wip: test

* add basic tests

* missing file

* [RPC] Zero copy serializer (#1517)

* zerocopy serialization

* add test for HeteroGraph

* fix lint

* remove unnecessary codes

* add comment

* lint

* lint

* disable pylint for now

* add include for win

* windows guard

* lint

* lint

* skip test on windows

* refactor

* add comment

* fix

* comment

* 1111

* fix

* Update Jenkinsfile

* [RPC] Implementation of RPC infra (#1544)

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* remove client.cc and server.cc

* fix lint

* update

* update

* fix linr

* update

* fix lint

* update

* update

* update

* update

* update

* update

* update test

* update

* update test

* update

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* update comment

* update

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* fix lint

* fix lint

* update

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* update

* update

* update

* update
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

3e696922

15 May, 2020 1 commit
- [Feature] Add a request_format api and enrich related docstring. (#1528) · 70dc2ee9
  Zihao Ye authored May 16, 2020
```
* upd

* upd

* lint

* fix

* bloody lint
```
  70dc2ee9
14 May, 2020 2 commits

[hotfix] Several bug fix for remove nodes/edges in DGLGraph. (#1521) · cfb24790
Zihao Ye authored May 15, 2020
```
* upd

* upd

* better
```
cfb24790

[Refactor] Restrict sparse format for DGLHeteroGraph (#1474) · c2e61ce1

Zihao Ye authored May 14, 2020



* upd

* simplify

* further simplify

* lint

* doc

* upd

* upd

* upd

* upd

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* lint

* rename format

* upd

* lint

* upd

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* udp

* debug

* upd

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* upd

* upd

* 无可厚非吧

* 中三边肥

* 你一定要喊吗

* lint

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* Update unit_graph.h
Co-authored-by: Zihao Ye <yzh119@192.168.0.110>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

c2e61ce1

08 May, 2020 2 commits

[bugfix] Fix the behavior of dgl.batch when batch size is 1 (#1483) · 1af0d806
Zihao Ye authored May 08, 2020
```
* fix

* upd

* upd

* upd

* upd

* clone

* upd
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
```
1af0d806

[Refactor] Explicit dtype for HeteroGraph (#1467) · dc8ca88e

Jinjing Zhou authored May 08, 2020



* 111

* 111

* lint

* lint

* lint

* lint

* fix

* lint

* try

* fix

* lint

* lint

* test

* fix

* ttt

* test

* fix

* fix

* fix

* mxnet

* 111

* fix 64bits computation

* pylint

* roll back

* fix

* lint

* fix hetero_from_relations

* remove index_dtype in to_homo and to_hetero

* fix

* fix

* fix

* fix

* remove default

* fix

* lint

* fix

* fix error message

* fix error

* lint

* macro dispatch

* try

* lint

* remove nbits

* error message

* fix

* fix

* lint

* lint

* lint

* fix

* lint

* fix

* fix random walk

* lint

* lint

* fix

* fix

* fix

* lint

* fix

* lint
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

dc8ca88e

02 May, 2020 2 commits

[KVStore] Fix bug of get_meta() API (#1491) · 5fc334fc

Chao Ma authored May 02, 2020

* fix get-shape

* update

* update

* update

* update

* update

* fix typo

* update

* update

5fc334fc

[Fix] Fix stream creation and empty dict in tensor serialization (#1489) · 30b8074a

Jinjing Zhou authored May 02, 2020

* add functions

* fix litn

* add unit test

* fix

* fix

* fix

* fix

* support empty dict

* simplify logic

* Update tensor_serialize.py

30b8074a

01 May, 2020 1 commit

[Hetero] Improve speed of several Hetero APIs (#1486) · f25bc176

Minjie Wang authored May 01, 2020

* add clone function to frame

* add utest

* replace all local_var with local_scope

* fix utest

* avoid creating canonical types in __getitem__

* lint

* try another utest  appraoch for mx

* utest

f25bc176

29 Apr, 2020 1 commit
- [Bugfix] Add bool data type to backend. (#1487) · 3c4506e9
  Minjie Wang authored Apr 29, 2020
```
* add bool to F.data_type_dict

* add utest

* skip bool test for mx
```
  3c4506e9
27 Apr, 2020 2 commits

[Data] Add utils to save dict of tensors (#1481) · 1506560e
Jinjing Zhou authored Apr 28, 2020
```
* add functions

* fix litn

* add unit test

* fix

* fix
```
1506560e

[KVStore] Bug fix (#1480) · 100ddd06

Chao Ma authored Apr 28, 2020



* update

* update

* update

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* fix lint

* update

* Update network.cc
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

100ddd06

26 Apr, 2020 1 commit

[KVStore] add init_data() on client (#1466) · 27520bc5

Chao Ma authored Apr 26, 2020

* add init_data on client

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* update

* fix lint

* fix lint

* update

* update

* update

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* update

27520bc5

20 Apr, 2020 1 commit

[KVstore] Improve user infterface (#1454) · 5efd1c4a

Chao Ma authored Apr 21, 2020

* update

* update

* update

* update

* update

* update

* update

* update

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* update

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* update

* update

* update

5efd1c4a

09 Apr, 2020 1 commit
- [Bug] Fix khop graph (#1433) · bd1e48a5
  Mufei Li authored Apr 10, 2020
```
* Update

* Update

* Update
```
  bd1e48a5
06 Apr, 2020 1 commit
- fix #1421 (#1422) · 91f7ff8e
  Quan (Andy) Gan authored Apr 06, 2020
  
  91f7ff8e
05 Apr, 2020 1 commit

[Feature] Simplify shared memory graph index (#1381) · 7c47d8c9

Da Zheng authored Apr 05, 2020



* simplify shared memory graph index.

* fix.

* remove edge_dir in SharedMemGraphStore.

* avoid creating shared-mem graph store with from_csr.

* simplify from_csr.

* add comments.

* fix lint.

* remove the test.

* fix compilation error.

* fix a bug.

* fix a bug.
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-150.us-west-2.compute.internal>

7c47d8c9

03 Apr, 2020 1 commit
- [BUG] Fix #1409 (#1411) · 24dc71fc
  Quan (Andy) Gan authored Apr 03, 2020
```
* [BUG] Fix #1409

* fix test
```
  24dc71fc
30 Mar, 2020 4 commits
- [Windows] fix compilation issues on vs2015 (#1405) · e4cc8185
  Quan (Andy) Gan authored Mar 30, 2020
```
* [Windows] fix compilation issues on vs2015

* fix test
```
  e4cc8185
- [Sampler] Change argument type of fanout from list to dict (#1403) · 4b4186f8
  Quan (Andy) Gan authored Mar 30, 2020
  
  4b4186f8
- [BUG] fix crash in neighbor sampling w/ replacement on 0 degree nodes (#1402) · 97b08fbb
  Quan (Andy) Gan authored Mar 30, 2020
  
  97b08fbb
- add an optional include_dst_in_src argument (#1401) · e3a9a6bb
  Quan (Andy) Gan authored Mar 30, 2020
  
  e3a9a6bb
28 Mar, 2020 1 commit

[Feature] Deprecate multigraph (#1389) · 67cb7a43

xiang song(charlie.song) authored Mar 28, 2020



* Deprecate multi-graph

* Handle heterograph and edge_ids

* lint

* Fix

* Remove multigraph in C++ end

* Fix lint

* Add some test and fix something

* Fix

* Fix

* upd

* Fix some test case

* Fix

* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

67cb7a43

27 Mar, 2020 1 commit

[Feature] Casting between DGLGraph and DGLHeteroGraph (#1391) · bbfff8ce

Quan (Andy) Gan authored Mar 27, 2020



* [Feature] Casting between DGLGraph and DGLHeteroGraph

* lint

* address comments
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

bbfff8ce

25 Mar, 2020 1 commit
- [MXNet] Patch mxnet unittest (#1395) · 1e27e90e
  Jinjing Zhou authored Mar 26, 2020
```
* patch

* turn off tf test

* skip test

* fix
```
  1e27e90e
23 Mar, 2020 1 commit
- [BUG] Another fix on remove edges when all edges are removed (#1386) · b9c65e91
  Quan (Andy) Gan authored Mar 23, 2020
```
* [BUG] Another fix on remove edges when all edges are removed

* fix mxnet
```
  b9c65e91
22 Mar, 2020 2 commits
- [BUG] Fix remove_edges crashing with empty edge ID tensors (#1384) · d27b4859
  Quan (Andy) Gan authored Mar 22, 2020
  
  d27b4859
- [BUGFIX] Fix is_multigraph in the construction from scipy coo matrix (#1357) · 10253a5c
  Da Zheng authored Mar 22, 2020
```
* fix is_multigraph in from_coo.

* add tests for partition.

* fix.

* Revert "add tests for partition."

This reverts commit cb8c8555da3e0c70a482c2d639adce2943475bfc.

* fix everywhere from_scipy_sparse_matrix is used.
```
  10253a5c
20 Mar, 2020 1 commit
- [Hetero] Replace card with num_nodes · 0f40c6e4
  Mufei Li authored Mar 20, 2020
```
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
```
  0f40c6e4
18 Mar, 2020 1 commit
- [Bug] Fix dsttype in GraphSAGE minibatch model (#1371) · 0a51dc54
  Quan (Andy) Gan authored Mar 18, 2020
```
* fix for new ntype API for blocks

* adding two new interfaces
```
  0a51dc54
16 Mar, 2020 1 commit

[Model] RGCN mini-batch training; Better bipartite graph support (#1337) · 6111ea46

Minjie Wang authored Mar 16, 2020

* change the model to use node embedding only

* minibatch training

* add readme

* small fix

* backward-compatible

* backward compatible

* modify to_block; rgcn changed

* fix

* fix transform

* fix bug in unittest script

* docstring

* fix lint

* add tests

* address comments; fix offline eval

* gitignore

6111ea46

11 Mar, 2020 1 commit

[Feature] Improve the speed of to_bidirected (#1327) · 1a584ced

Da Zheng authored Mar 10, 2020

* make graph symmetric

* call gklib routine.

* use gklib version except in windows.

* minor errors.

* fix test.

* update doc.

* fix a compile error.

* fix.

* add comments for the new C API.

* fix a bug.

* address comments.

* fix compile error.

* fix comment.

1a584ced

10 Mar, 2020 1 commit

[Optimization] Optimize CompactGraph (#1328) · 7b3a7b14

xiang song(charlie.song) authored Mar 10, 2020



* compact

* prealloc memory for hashtable

* Fix

* upd

* Reduce memory

* upd
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>

7b3a7b14

08 Mar, 2020 1 commit

[Feature] add metis partitioning to DGL (#1308) · 0e153c4b

Da Zheng authored Mar 07, 2020



* add metis.

* add test.

* construct partition id.

* link to METIS github repo.

* update metis.

* add a tool for partitioning a graph.

* update metis.

* update.

* update.

* fix metis.

* fix lint

* fix indent.

* another way of building metis.

* disable metis in windows.

* test windows

* fix.

* disable metis for windows properly.

* fix for tensorflow.

* skip test for gpu.

* make graph symmetric

* address comments.

* more comments.

* fix compile

* fix a bug.

* add test.

* change the default #hops of HALO nodes.
Co-authored-by: Ubuntu <ubuntu@ip-172-31-26-167.us-east-2.compute.internal>

0e153c4b