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  1. 30 Aug, 2019 1 commit
  2. 28 Aug, 2019 5 commits
    • Quan (Andy) Gan's avatar
      [Doc][Conda] Fixing pytorch.nn.factory docs and Conda license (#805) · 98b825e3
      Quan (Andy) Gan authored
      * [Conda] Update license
      
      * doc fixes
      98b825e3
    • Quan (Andy) Gan's avatar
      a5b661a2
    • Quan (Andy) Gan's avatar
      [Doc] Fixing KNNGraph docs (#803) · 828e269c
      Quan (Andy) Gan authored
      828e269c
    • xiang song(charlie.song)'s avatar
      [NN] Add MXNet impl for TAGCN module. (#799) · e17add56
      xiang song(charlie.song) authored
      * upd
      
      * fig edgebatch edges
      
      * add test
      
      * trigger
      
      * Update README.md for pytorch PinSage example.
      
      Add noting that the PinSage model example under
      example/pytorch/recommendation only work with Python 3.6+
      as its dataset loader depends on stanfordnlp package
      which work only with Python 3.6+.
      
      * Provid a frame agnostic API to test nn modules on both CPU and CUDA side.
      
      1. make dgl.nn.xxx frame agnostic
      2. make test.backend include dgl.nn modules
      3. modify test_edge_softmax of test/mxnet/test_nn.py and
          test/pytorch/test_nn.py work on both CPU and GPU
      
      * Fix style
      
      * Delete unused code
      
      * Make agnostic test only related to tests/backend
      
      1. clear all agnostic related code in dgl.nn
      2. make test_graph_conv agnostic to cpu/gpu
      
      * Fix code style
      
      * fix
      
      * doc
      
      * Make all test code under tests.mxnet/pytorch.test_nn.py
      work on both CPU and GPU.
      
      * Fix syntex
      
      * Remove rand
      
      * Add TAGCN nn.module and example
      
      * Now tagcn can run on CPU.
      
      * Add unitest for TGConv
      
      * Fix style
      
      * For pubmed dataset, using --lr=0.005 can achieve better acc
      
      * Fix style
      
      * Fix some descriptions
      
      * trigger
      
      * Fix doc
      
      * Add nn.TGConv and example
      
      * Fix bug
      
      * Update data in mxnet.tagcn test acc.
      
      * Fix some comments and code
      
      * delete useless code
      
      * Fix namming
      
      * Fix bug
      
      * Fix bug
      
      * Add test code for mxnet TAGCov
      
      * Update some docs
      
      * Fix some code
      
      * Update docs dgl.nn.mxnet
      
      * Update weight init
      
      * Fix
      e17add56
    • Quan (Andy) Gan's avatar
      [Example] Dynamic Graph CNN on Point Cloud (#789) · dc19cd56
      Quan (Andy) Gan authored
      * initial commit
      
      * second commit
      
      * another commit
      
      * change docstring
      
      * migrating to dgl.nn
      
      * fixes
      
      * docs
      
      * lint
      
      * multiple fixes
      
      * doc
      dc19cd56
  3. 27 Aug, 2019 1 commit
    • Zihao Ye's avatar
      [NN] Add commonly used GNN models from examples to dgl.nn modules. (#748) · 650f6ee1
      Zihao Ye authored
      * gat
      
      * upd
      
      * upd sage
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * add gmmconv
      
      * upd ggnn
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * add citation examples
      
      * add README
      
      * fix cheb
      
      * improve doc
      
      * formula
      
      * upd
      
      * trigger
      
      * lint
      
      * lint
      
      * upd
      
      * add test for transform
      
      * add test
      
      * check
      
      * upd
      
      * improve doc
      
      * shape check
      
      * upd
      
      * densechebconv, currently not correct (?)
      
      * fix cheb
      
      * fix
      
      * upd
      
      * upd sgc-reddit
      
      * upd
      
      * trigger
      650f6ee1
  4. 25 Aug, 2019 1 commit
    • Zihao Ye's avatar
      [Feature] Add builtin mean reducer (#787) · 2c234118
      Zihao Ye authored
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * passed test
      
      * add note
      
      * upd
      
      * trigger
      
      * slight change
      
      * upd
      
      * upd
      
      * trigger
      
      * fix
      
      * simplify
      
      * upd
      
      * upd
      
      * fudge
      
      * upd
      
      * trigger
      
      * test partial
      
      * upd
      
      * trigger
      2c234118
  5. 23 Aug, 2019 1 commit
    • Minjie Wang's avatar
      [NN] RGCN modules (#744) · 708765f0
      Minjie Wang authored
      * rgcn module
      
      * support id input
      
      * WIP: model codes
      
      * use faster index select
      
      * dropout
      
      * self loop
      
      * WIP: link prediction
      
      * fix lint
      
      * WIP: docs
      
      * docstring
      
      * docstring
      
      * merge two child classes
      
      * mxnet rgcn module
      
      * fix lint
      
      * fix lint
      
      * fix rename bug
      
      * add uniform edge sampler
      
      * fix fn name
      
      * docstring
      
      * fix mxnet rgcn module
      
      * fix mx rgcn
      
      * enable test on cuda
      708765f0
  6. 06 Aug, 2019 1 commit
  7. 05 Aug, 2019 1 commit
    • Zihao Ye's avatar
      [Feature] DGL Pooling modules (#669) · 5d3f470b
      Zihao Ye authored
      * removal doc
      
      * glob
      
      * upd
      
      * rm knn
      
      * add softmax
      
      * upd
      
      * upd
      
      * add broadcast and s2s
      
      * optimize max_on
      
      * forsaken changes to heterograph
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * bugfix
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * format upd
      
      * upd format
      
      * upd doc
      
      * upd
      
      * import order
      
      * upd
      
      * rm warnings
      
      * fix
      
      * upd test
      
      * upd
      
      * upd
      
      * fix device
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * remove 1.1
      
      * upd
      
      * trigger
      
      * trigger
      
      * add more tests
      
      * fix device
      
      * upd
      
      * upd
      
      * refactor
      
      * fix?
      
      * fix
      
      * upd docstring
      
      * refactor
      
      * upd
      
      * fix
      
      * upd
      
      * upd
      
      * upd
      
      * fix
      
      * upd docs
      
      * add shape
      
      * refactor & upd doc
      
      * upd doc
      
      * upd
      5d3f470b
  8. 02 Aug, 2019 1 commit
  9. 31 Jul, 2019 1 commit
    • Quan (Andy) Gan's avatar
      [Refactor] C random number generator (#729) · e9e587b6
      Quan (Andy) Gan authored
      * rng refactor
      
      * fix bugs
      
      * unit test
      
      * remove setsize
      
      * lint
      
      * fix test
      
      * use explicit instantiation instead of inlining
      
      * stricter test
      
      * use tvm solution
      
      * moved python interface to dgl.random
      
      * lint
      
      * address comments
      
      * make getthreadid an inline function
      e9e587b6
  10. 30 Jul, 2019 1 commit
  11. 15 Jul, 2019 1 commit
  12. 01 Jul, 2019 1 commit
    • Minjie Wang's avatar
      [FFI] FFI container support, custom structure extension via Object (#693) · 90e78c58
      Minjie Wang authored
      * WIP: import tvm runtime node system
      
      * WIP: object system
      
      * containers
      
      * tested basic container composition
      
      * tested custom object
      
      * fix setattr bug
      
      * tested object container return
      
      * fix lint
      
      * some comments about get/set state
      
      * fix lint
      
      * fix lint
      
      * update cython
      
      * fix cython
      
      * ffi doc
      
      * fix doc
      90e78c58
  13. 19 Jun, 2019 1 commit
  14. 14 Jun, 2019 1 commit
  15. 11 Jun, 2019 2 commits
  16. 10 Jun, 2019 2 commits
  17. 08 Jun, 2019 2 commits
    • HQ's avatar
      [Enhancement] Add DGLGraph.to for PyTorch and MXNet backend (#600) · 993fd3f9
      HQ authored
      * add graph_to
      
      * use backend copy_to
      
      * add test
      
      * fix test
      
      * framework agnostic to() test
      
      * disable pylint complaint
      
      * add examples
      
      * fix docstring
      
      * formatting
      
      * Format
      
      * Update test_to_device.py
      993fd3f9
    • Zihao Ye's avatar
      [Feature] Remove nodes/edges. (#599) · baa16231
      Zihao Ye authored
      * upd
      
      * upd
      
      * reformat
      
      * upd
      
      * upd
      
      * add test
      
      * fix arange
      
      * fix slight bug
      
      * upd
      
      * trigger
      
      * upd docs
      
      * upd
      
      * upd
      
      * upd
      
      * change subgraph to be raw data wrapper
      
      * upd
      
      * fix test
      baa16231
  18. 08 May, 2019 1 commit
  19. 17 Apr, 2019 1 commit
    • kitaev-chen's avatar
      [Model] Add GIN Model (#471) · a3febc06
      kitaev-chen authored
      * add gin model
      
      * convert dataset.py to data_ont_the_fly way and put it into dgl.data module
      
      * convert dataset.py to data_ont_the_fly way and put it into dgl.data module
      python code checked
      
      * modified document and reference TUDataset; checked python part and bypass cpp part due to error
      
      * change tensor to numpy in dataset and transform in collate@Dataloader
      
      * Change minor format issue
      
      Change minor format issue
      
      * moved logging; adjusted tqdm etc
      a3febc06
  20. 10 Apr, 2019 1 commit
    • VoVAllen's avatar
      [Dataset] Add TUDataset (#473) · 00fc680a
      VoVAllen authored
      * add graph classification dataset
      
      * add node label
      
      * add TUDataset
      
      * Modify to consistent with Qi Huang's implementation
      
      * add docs
      
      * Add docs
      
      * Fix change of environment variable
      
      * Update tu.py
      
      * Update tu.py
      
      * Fix error when add node with np.int64
      00fc680a
  21. 01 Apr, 2019 1 commit
  22. 13 Mar, 2019 1 commit
  23. 05 Mar, 2019 1 commit
    • Minjie Wang's avatar
      [Refactor] Nodeflow, sampling, CAPI (#430) · ca2a7e1c
      Minjie Wang authored
      * enable cython
      
      * add helper function and data structure for void_p vector return
      
      * move sampler from graph index to contrib.sampling
      
      * WIP
      
      * WIP
      
      * refactor layer sampling
      
      * pass tests
      
      * fix lint
      
      * fix graphsage
      
      * remove comments
      
      * pickle test
      
      * fix comments
      
      * update dev guide for cython build
      ca2a7e1c
  24. 02 Mar, 2019 1 commit
  25. 01 Mar, 2019 1 commit
  26. 25 Feb, 2019 1 commit
    • Minjie Wang's avatar
      [WIP] [NN] Refactor NN package (#406) · 565f0c88
      Minjie Wang authored
      * refactor graph conv
      
      * docs & tests
      
      * fix lint
      
      * fix lint
      
      * fix lint
      
      * fix lint script
      
      * fix lint
      
      * Update
      
      * Style fix
      
      * Fix style
      
      * Fix style
      
      * Fix gpu case
      
      * Fix for gpu case
      
      * Hotfix edgesoftmax docs
      
      * Handle repeated features
      
      * Add docstring
      
      * Set default arguments
      
      * Remove dropout from nn.conv
      
      * Fix
      
      * add util fn for renaming
      
      * revert gcn_spmv.py
      
      * mx folder
      
      * fix wierd bug
      
      * fix mx
      
      * fix lint
      565f0c88
  27. 20 Feb, 2019 1 commit
  28. 17 Feb, 2019 1 commit
    • Hao Zhang's avatar
      [Model]PPI dataloader and inductive learning script. (#395) · 788d8dd4
      Hao Zhang authored
      * Create ppi.py
      
      * Create train_ppi.py
      
      * Update train_ppi.py
      
      * Update train_ppi.py
      
      * Create gat.py
      
      * Update train.py
      
      * Update train_ppi.py
      
      * Update ppi.py
      
      * Update train_ppi.py
      
      * Update ppi.py
      
      * Update train_ppi.py
      
      * Update train_ppi.py
      
      * Update ppi.py
      
      * Update train_ppi.py
      
      * update docs and readme
      788d8dd4
  29. 14 Feb, 2019 1 commit
  30. 25 Jan, 2019 2 commits
  31. 12 Jan, 2019 1 commit
    • VoVAllen's avatar
      [Docs] Move file_pattern option from Makefile to conf.py (#352) · 19e1b140
      VoVAllen authored
      * add rtfd
      
      * rrr
      
      * update
      
      * change env
      
      * temp fix
      
      * update
      
      * fix
      
      * fix
      
      * add
      
      * conf
      
      * Move file_pattern from Makefile to conf.py
      
      * remove yml
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * remove yml
      
      * remove yml
      
      * add doc docker
      
      * add dgl install script
      
      * change name
      
      * change dockerfile
      
      * fix
      
      * name
      
      * add
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * add doc-build files
      
      * remove unnecessary import os
      19e1b140
  32. 10 Jan, 2019 1 commit