GitLab

* upd

* upd

* Improve error message

* Fix

* Fix
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>

* upd

* upd

* lint

* fix

* bloody lint

* pickle compatibility before 0.4.2

* fixing for utils.Index

* add TODOs

* fix

* fix

* more compatibility checks for DGLGraph and DGLHeteroGraph objects

* lint
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* upd

* simplify

* further simplify

* lint

* doc

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* lint

* rename format

* upd

* lint

* upd

* upd

* upd

* udp

* debug

* upd

* upd

* upd

* upd

* upd

* 无可厚非吧

* 中三边肥

* 你一定要喊吗

* lint

* upd

* upd

* upd

* upd

* upd

* upd

* upd

* Update unit_graph.h
Co-authored-by: Zihao Ye <yzh119@192.168.0.110>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* 111

* 111

* lint

* lint

* lint

* lint

* fix

* lint

* try

* fix

* lint

* lint

* test

* fix

* ttt

* test

* fix

* fix

* fix

* mxnet

* 111

* fix 64bits computation

* pylint

* roll back

* fix

* lint

* fix hetero_from_relations

* remove index_dtype in to_homo and to_hetero

* fix

* fix

* fix

* fix

* remove default

* fix

* lint

* fix

* fix error message

* fix error

* lint

* macro dispatch

* try

* lint

* remove nbits

* error message

* fix

* fix

* lint

* lint

* lint

* fix

* lint

* fix

* fix random walk

* lint

* lint

* fix

* fix

* fix

* lint

* fix

* lint
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* add clone function to frame

* add utest

* replace all local_var with local_scope

* fix utest

* avoid creating canonical types in __getitem__

* lint

* try another utest  appraoch for mx

* utest

* init gat

* fix

* gin

* 7 nn modules

* rename & lint

* upd

* upd

* fix lint

* upd test

* upd

* lint

* shape check

* upd

* lint

* address comments

* update tensorflow
Co-authored-by: Quan Gan <coin2028@hotmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* Deprecate multi-graph

* Handle heterograph and edge_ids

* lint

* Fix

* Remove multigraph in C++ end

* Fix lint

* Add some test and fix something

* Fix

* Fix

* upd

* Fix some test case

* Fix

* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* Add HeteroGraphConv

* add custom aggregator; some docstring

* debugging

* rm print

* fix some acc bugs

* fix initialization problem in weight basis

* passed tests

* lint

* fix graphconv flag; add error message

* add mxnet heteroconv

* more fix for mx

* lint

* fix torch cuda test

* fix mx test_nn

* add exhaust test for graphconv

* add tf heteroconv

* fix comment

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* multiple fixes

* lint

* lint x2

* fix for new ntype API for blocks

* adding two new interfaces

* change the model to use node embedding only

* minibatch training

* add readme

* small fix

* backward-compatible

* backward compatible

* modify to_block; rgcn changed

* fix

* fix transform

* fix bug in unittest script

* docstring

* fix lint

* add tests

* address comments; fix offline eval

* gitignore

* remove edge and to bipartite and graphsage with sampling

* fixes

* fixes

* fixes

* reenable multigpu training

* fixes

* compatibility in DGLGraph

* rename to compact_as_bipartite

* bugfix

* lint

* add offline inference

* skip GPU tests

* fix

* addresses comments

* fix

* fix

* fix

* more tests

* more docs and unit tests

* workaround for empty slice on empty data

* add num nodes in ctors

* fix

* lint

* addresses comments

* replace with constexpr

* remove function with rvalue reference

* address comments

* improve performance of sample_neighbors

* some more improve

* test script

* benchmarks

* multi process

* update more tests

* WIP

* adding two API for state saving

* add create from state

* upd test

* missing file

* wip: pickle/unpickle

* more c apis

* find the problem of empty data array

* add null array; pickling speed is bad

* still bad perf

* still bad perf

* wip

* fix the pickle speed test; now everything looks good

* minor fix

* bugfix

* some lint fix

* address comments

* more fix

* fix lint

* add utest for random.choice

* add utest for dgl.rand_graph

* fix cpp utests

* try fix ci

* fix bug in TF backend

* upd choice docstring

* address comments

* upd

* try fix compile

* add comment

* WIP

* fix shape of stack reducer

* apply merge order by edge id for stack reducer

* WIP: working on random choices

* light slice

* basic CPU impl

* add python binding; fix CreateFromCOO and CreateFromCSR returning unitgraph

* simple test case works

* fix bug in slicing probability array

* fix bug in getting the correct relation graph

* fix bug in creating placeholder graph

* enable omp

* add cpp test

* sample topk

* add in|out_subgraph

* try fix lint; passed all unittests

* fix lint

* fix msvc compile; add sorted flag and constructors

* fix msvc

* coosort

* COOSort; CSRRowWiseSampling; CSRRowWiseTopk

* WIP: remove DType in CSR and COO; Restrict data array to be IdArray

* fix all CSR ops for missing data array

* compiled

* passed tests

* lint

* test sampling out edge

* test different per-relation fanout/k values

* fix bug in random choice

* finished cpptest

* fix compile

* Add induced edges

* add check

* fixed bug in sampling on hypersparse graph; add tests

* add ascending flag

* in|out_subgraph returns subgraph and induced eid

* address comments

* lint

* fix

* typed udf

* docstrings

* fix

* unit test

* To(device) should return updated object

* Add test case and doc

* Add another doc

* Add descriptions  and a test

* Pass test

* Update

* Update

* Update

* Fix

* CI style fix

* CI fix style

* Fix

* Try CI

* Fix test

* Update

* Update

* Update

* Update

* Update

* Try CI

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* style fixes & undefined name fix

* transpose=False in test

* [Hetero] Create heterograph from dictionary of edge lists

* rename

* address comments

* Add HAN

* Fix

* WIP; load raw ACM dataset

* DGL's own preprocessing with metapath coalescer

* various fixes

* comparison against simple logistic regression

* rename

* fix test

* WIP. remove graph arg in NodeBatch and EdgeBatch

* refactor: use graph adapter for scheduler

* WIP: recv

* draft impl

* stuck at bipartite

* bipartite->unitgraph; support dsttype == srctype

* pass test_query

* pass test_query

* pass test_view

* test apply

* pass udf message passing tests

* pass quan's test using builtins

* WIP: wildcard slicing

* new construct methods

* broken

* good

* add stack cross reducer

* fix bug; fix mx

* fix bug in csrmm2 when the CSR is not square

* lint

* removed FlattenedHeteroGraph class

* WIP

* prop nodes, prop edges, filter nodes/edges

* add DGLGraph tests to heterograph. Fix several bugs

* finish nx<->hetero graph conversion

* create bipartite from nx

* more spec on hetero/homo conversion

* silly fixes

* check node and edge types

* repr

* to api

* adj APIs

* inc

* fix some lints and bugs

* fix some lints

* hetero/homo conversion

* fix flatten test

* more spec in hetero_from_homo and test

* flatten using concat names

* WIP: creators

* rewrite hetero_from_homo in a more efficient way

* remove useless variables

* fix lint

* subgraphs and typed subgraphs

* lint & removed heterosubgraph class

* lint x2

* disable heterograph mutation test

* docstring update

* add edge id for nx graph test

* fix mx unittests

* fix bug

* try fix

* fix unittest when cross_reducer is stack

* fix ci

* fix nx bipartite bug; docstring

* fix scipy creation bug

* lint

* fix bug when converting heterograph from homograph

* fix bug in hetero_from_homo about ntype order

* trailing white

* docstring fixes for add_foo and data views

* docstring for relation slice

* to_hetero and to_homo with feature support

* lint

* lint

* DGLGraph compatibility

* incidence matrix & docstring fixes

* example string fixes

* feature in hetero_from_relations

* deduplication of edge types in to_hetero

* fix lint

* fix

* moving heterograph index to another file

* node view

* python interfaces

* heterograph init

* bug fixes

* docstring for readonly

* more docstring

* unit tests & lint

* oops

* oops x2

* removed node/edge addition

* addressed comments

* lint

* rw on frames with one node/edge type

* homograph with underlying heterograph demo

* view is not necessary

* bugfix

* replace

* scheduler, builtins not working yet

* moving bipartite.h to header

* moving back bipartite to bipartite.h

* oops

* asbits and copyto for bipartite

* tested update_all and send_and_recv

* lightweight node & edge type retrieval

* oops

* sorry

* removing obsolete code

* oops

* lint

* various bug fixes & more tests

* UDF tests

* multiple type number_of_nodes and number_of_edges

* docstring fixes

* more tests

* going for dict in initialization

* lint

* updated api as per discussions

* lint

* bug

* bugfix

* moving back bipartite impl to cc

* note on views

* fix

* [Feature][RFC] Heterogeneous graph interface (#553)

* heterogeneous graph interface

* lint

* disable lints

* disable lint checks

* change node_types to dict

* update

* update

* heterograph view

* message passing with types

* clarifications

* graph queries

* clarifications

* moving add_XXX to Base

* from_networkx

* register functions

* Update heterograph.py

* lint.