load_dataset.py

""" load dataset from ogb """

import argparse
from ogb.linkproppred import DglLinkPropPredDataset
from ogb.nodeproppred import DglNodePropPredDataset
import dgl

def load_from_ogbl_with_name(name):    
    choices = ['ogbl-collab', 'ogbl-ddi', 'ogbl-ppa', 'ogbl-citation']
    assert name in choices, "name must be selected from " + str(choices)
    dataset = DglLinkPropPredDataset(name)
    return dataset[0]

def load_from_ogbn_with_name(name):    
    choices = ['ogbn-products', 'ogbn-proteins', 'ogbn-arxiv', 'ogbn-papers100M']
    assert name in choices, "name must be selected from " + str(choices)
    dataset, label = DglNodePropPredDataset(name)[0]
    return dataset

if __name__ == "__main__":
    """ load datasets as net.txt format """
    parser = argparse.ArgumentParser()
    parser.add_argument('--name', type=str,
        choices=['ogbl-collab', 'ogbl-ddi', 'ogbl-ppa', 'ogbl-citation', 
            'ogbn-products', 'ogbn-proteins', 'ogbn-arxiv', 'ogbn-papers100M'],
        default='ogbl-collab',
        help="name of datasets by ogb")
    args = parser.parse_args()

    name = args.name
    if name.startswith("ogbl"):
        g = load_from_ogbl_with_name(name=name)
    else:
        g = load_from_ogbn_with_name(name=name)

    dgl.save_graphs(name + "-graph.bin", g)