parser.py

"""Parser for arguments

Put all arguments in one file and group similar arguments
"""
import argparse


class Parser:
    def __init__(self, description):
        """
        arguments parser
        """
        self.parser = argparse.ArgumentParser(description=description)
        self.args = None
        self._parse()

    def _parse(self):
        # dataset
        self.parser.add_argument(
            "--dataset",
            type=str,
            default="MUTAG",
            help="name of dataset (default: MUTAG)",
        )
        self.parser.add_argument(
            "--batch_size",
            type=int,
            default=32,
            help="batch size for training and validation (default: 32)",
        )
        self.parser.add_argument(
            "--fold_idx",
            type=int,
            default=0,
            help="the index(<10) of fold in 10-fold validation.",
        )
        self.parser.add_argument(
            "--filename", type=str, default="", help="output file"
        )

        # device
        self.parser.add_argument(
            "--disable-cuda", action="store_true", help="Disable CUDA"
        )
        self.parser.add_argument(
            "--device",
            type=int,
            default=0,
            help="which gpu device to use (default: 0)",
        )

        # net
        self.parser.add_argument(
            "--net", type=str, default="gin", help="gnn net (default: gin)"
        )
        self.parser.add_argument(
            "--num_layers",
            type=int,
            default=5,
            help="number of layers (default: 5)",
        )
        self.parser.add_argument(
            "--num_mlp_layers",
            type=int,
            default=2,
            help="number of MLP layers(default: 2). 1 means linear model.",
        )
        self.parser.add_argument(
            "--hidden_dim",
            type=int,
            default=64,
            help="number of hidden units (default: 64)",
        )

        # graph
        self.parser.add_argument(
            "--graph_pooling_type",
            type=str,
            default="sum",
            choices=["sum", "mean", "max"],
            help="type of graph pooling: sum, mean or max",
        )
        self.parser.add_argument(
            "--neighbor_pooling_type",
            type=str,
            default="sum",
            choices=["sum", "mean", "max"],
            help="type of neighboring pooling: sum, mean or max",
        )
        self.parser.add_argument(
            "--learn_eps",
            action="store_true",
            help="learn the epsilon weighting",
        )
        self.parser.add_argument(
            "--degree_as_tag",
            action="store_true",
            help="take the degree of nodes as input feature",
        )

        # learning
        self.parser.add_argument(
            "--seed", type=int, default=0, help="random seed (default: 0)"
        )
        self.parser.add_argument(
            "--epochs",
            type=int,
            default=350,
            help="number of epochs to train (default: 350)",
        )
        self.parser.add_argument(
            "--lr",
            type=float,
            default=0.01,
            help="learning rate (default: 0.01)",
        )
        self.parser.add_argument(
            "--final_dropout",
            type=float,
            default=0.5,
            help="final layer dropout (default: 0.5)",
        )

        # done
        self.args = self.parser.parse_args()