[refactor] moving memtracer to gemini (#801)

colossalai/engine/ophooks/_memtracer_ophook.py

@@ -8,8 +8,6 @@ from colossalai.registry import OPHOOKS
 from colossalai.logging import get_dist_logger
 from colossalai.core import global_context as gpc
 from typing import Union
-from colossalai.utils.memory_tracer import AsyncMemoryMonitor
-import os
 import math
 
 
@@ -25,6 +23,7 @@ class MemTracerOpHook(BaseOpHook):
     """
 
     def __init__(self, warmup: int = 50, refreshrate: int = 10, data_prefix: str = "memstats"):
+        from colossalai.gemini.memory_tracer import AsyncMemoryMonitor
         super().__init__()
         self.async_mem_monitor = AsyncMemoryMonitor()
         self._curiter = 0

colossalai/engine/schedule/_pipeline_schedule.py

@@ -12,10 +12,10 @@ from colossalai.core import global_context as gpc
 from colossalai.logging import get_dist_logger
 from colossalai.utils import switch_virtual_pipeline_parallel_rank
 from colossalai.utils.cuda import get_current_device
-from colossalai.zero.sharded_model import ShardedModelV2
 
 from ._base_schedule import BaseSchedule
 
+
 def get_tensor_shape():
     if hasattr(gpc.config, 'TENSOR_SHAPE'):
         return gpc.config.TENSOR_SHAPE
@@ -23,7 +23,8 @@ def get_tensor_shape():
     if not gpc.is_initialized(ParallelMode.PIPELINE):
         return None
 
-    if hasattr(gpc.config, 'SEQ_LENGTH') and hasattr(gpc.config, 'GLOBAL_BATCH_SIZE') and hasattr(gpc.config, 'GLOBAL_BATCH_SIZE') and hasattr(gpc.config, 'HIDDEN_SIZE'):
+    if hasattr(gpc.config, 'SEQ_LENGTH') and hasattr(gpc.config, 'GLOBAL_BATCH_SIZE') and hasattr(
+            gpc.config, 'GLOBAL_BATCH_SIZE') and hasattr(gpc.config, 'HIDDEN_SIZE'):
         if gpc.is_initialized(ParallelMode.DATA):
             dp_size = gpc.get_world_size(ParallelMode.DATA)
         else:
@@ -34,12 +35,12 @@ def get_tensor_shape():
             seq_size = 1
 
         tensor_shape = (gpc.config.SEQ_LENGTH // seq_size,
-                        gpc.config.GLOBAL_BATCH_SIZE // dp_size // gpc.config.NUM_MICRO_BATCHES,
-                        gpc.config.HIDDEN_SIZE)
+                        gpc.config.GLOBAL_BATCH_SIZE // dp_size // gpc.config.NUM_MICRO_BATCHES, gpc.config.HIDDEN_SIZE)
         return tensor_shape
     else:
         return None
 
+
 def pack_return_tensors(return_tensors):
     output, label = tuple(zip(*return_tensors))
     if isinstance(output[0], torch.Tensor):
@@ -114,7 +115,7 @@ class PipelineSchedule(BaseSchedule):
     def pre_processing(self, engine):
         # TODO: remove this after testing new zero with pipeline parallelism
         model = engine.model
-        if isinstance(model, (NaiveAMPModel, ShardedModelV2)):
+        if isinstance(model, (NaiveAMPModel)) or hasattr(model, 'colo_attr'):
             self.dtype = torch.half
             model = model.model
         sig = inspect.signature(model.forward)
@@ -125,7 +126,7 @@ class PipelineSchedule(BaseSchedule):
     def _call_engine(model, input_tensor, batch_data):
         if isinstance(model, NaiveAMPModel):
             sig = inspect.signature(model.model.forward)
-        elif isinstance(model, ShardedModelV2):
+        elif hasattr(model, 'colo_attr'):
             sig = inspect.signature(model.module.forward)
         else:
             sig = inspect.signature(model.forward)
@@ -385,7 +386,8 @@ class InterleavedPipelineSchedule(PipelineSchedule):
         self.num_model_chunks = num_model_chunks
 
     def pre_processing(self, engine):
-        if isinstance(engine.model, ShardedModelV2):
+        # FIXME(jiaruifang) we shall not use ShardedModelV2 in pipeline mode, due to circular dependency.
+        if hasattr(engine.model, 'colo_attr'):
             self.dtype = torch.half
         elif isinstance(engine.model[0], NaiveAMPModel):
             self.dtype = torch.half

colossalai/utils/memory_tracer/__init__.py → colossalai/gemini/memory_tracer/__init__.py

+from .model_data_memtracer import GLOBAL_MODEL_DATA_TRACER
 from .memory_monitor import AsyncMemoryMonitor, SyncCudaMemoryMonitor
 from .memstats_collector import MemStatsCollector
 
-__all__ = ['AsyncMemoryMonitor', 'SyncCudaMemoryMonitor', 'MemStatsCollector']
+__all__ = ['AsyncMemoryMonitor', 'SyncCudaMemoryMonitor', 'MemStatsCollector', 'GLOBAL_MODEL_DATA_TRACER']

colossalai/utils/memory_tracer/memory_monitor.py → colossalai/gemini/memory_tracer/memory_monitor.py

@@ -5,7 +5,7 @@ import json
 
 import torch
 
-from colossalai.utils.memory import colo_device_memory_used
+from colossalai.utils import colo_device_memory_used
 from colossalai.utils import get_current_device
 
 

colossalai/utils/memory_tracer/memstats_collector.py → colossalai/gemini/memory_tracer/memstats_collector.py

-from colossalai.utils.memory_tracer.model_data_memtracer import GLOBAL_MODEL_DATA_TRACER
+from colossalai.gemini.memory_tracer import GLOBAL_MODEL_DATA_TRACER
+from colossalai.gemini.memory_tracer import SyncCudaMemoryMonitor
 from colossalai.utils.memory import colo_device_memory_used
-from colossalai.utils.memory_tracer import SyncCudaMemoryMonitor
+
 import torch
 import time
 from typing import List
@@ -138,6 +139,9 @@ class MemStatsCollector:
         self._model_data_cpu_list = []
         self._overall_cpu_list = []
 
+        self._non_model_data_cpu_list = []
+        self._non_model_data_cuda_list = []
+
         self._start_flag = False
         self._step_idx = 0
         self._step_total = 0

colossalai/gemini/tensor_placement_policy.py

@@ -5,8 +5,8 @@ from colossalai.utils import get_current_device
 from colossalai.zero.sharded_param.tensor_utils import colo_model_data_tensor_move_inline, colo_tensor_mem_usage
 from colossalai.utils.memory import colo_device_memory_capacity
 from colossalai.zero.sharded_param.tensorful_state import StatefulTensor
-from colossalai.utils.memory_tracer import MemStatsCollector
-from colossalai.utils.memory_tracer.model_data_memtracer import GLOBAL_MODEL_DATA_TRACER
+from colossalai.gemini.memory_tracer import MemStatsCollector
+from colossalai.gemini.memory_tracer import GLOBAL_MODEL_DATA_TRACER
 from typing import Type
 
 

colossalai/trainer/hooks/_commons_.py

+import torch
+
+
+def _format_number(val, prec=5):
+    if isinstance(val, float):
+        return f'{val:.{prec}g}'
+    elif torch.is_tensor(val) and torch.is_floating_point(val):
+        return f'{val.item():.{prec}g}'
+    return val

colossalai/trainer/hooks/_log_hook.py

@@ -14,14 +14,7 @@ from colossalai.logging import DistributedLogger
 from colossalai.utils import report_memory_usage, is_dp_rank_0, \
     is_tp_rank_0, is_no_pp_or_last_stage, MultiTimer
 from ._base_hook import BaseHook
-
-
-def _format_number(val, prec=5):
-    if isinstance(val, float):
-        return f'{val:.{prec}g}'
-    elif torch.is_tensor(val) and torch.is_floating_point(val):
-        return f'{val.item():.{prec}g}'
-    return val
+from ._commons_ import _format_number
 
 
 class LogByEpochHook(BaseHook):
@@ -35,10 +28,7 @@ class LogByEpochHook(BaseHook):
             depend on the hooks order in the hook list.
     """
 
-    def __init__(self,
-                 logger,
-                 interval: int = 1,
-                 priority: int = 1):
+    def __init__(self, logger, interval: int = 1, priority: int = 1):
         super().__init__(priority)
         self.logger = logger
         self._interval = interval
@@ -63,14 +53,12 @@ class LogMetricByStepHook(BaseHook):
     def after_train_iter(self, trainer, *args):
         trainer.states['step_metrics'] = dict()
         for metric_name, metric_calculator in trainer.states['metrics']['train'].items():
-            trainer.states['step_metrics'][metric_name.lower()] = \
-                f'{_format_number(metric_calculator.get_last_step_value())}'
+            trainer.states['step_metrics'][metric_name.lower()] = metric_calculator.get_last_step_value()
 
     def after_test_iter(self, trainer, *args):
         trainer.states['step_metrics'] = dict()
         for metric_name, metric_calculator in trainer.states['metrics']['test'].items():
-            trainer.states['step_metrics'][metric_name.lower()] = \
-                f'{_format_number(metric_calculator.get_last_step_value())}'
+            trainer.states['step_metrics'][metric_name.lower()] = metric_calculator.get_last_step_value()
 
 
 @HOOKS.register_module
@@ -85,18 +73,14 @@ class LogMetricByEpochHook(LogByEpochHook):
             depend on the hooks order in the hook list.
     """
 
-    def __init__(self,
-                 logger,
-                 interval: int = 1,
-                 priority: int = 10) -> None:
+    def __init__(self, logger, interval: int = 1, priority: int = 10) -> None:
         super().__init__(logger, interval, priority)
         self._is_rank_to_log = is_dp_rank_0() and is_tp_rank_0() and is_no_pp_or_last_stage()
 
     def _get_str(self, trainer, mode):
         msg = []
         for metric_name, metric_calculator in trainer.states['metrics'][mode].items():
-            msg.append(
-                f'{metric_name} = {_format_number(metric_calculator.get_accumulated_value())}')
+            msg.append(f'{metric_name} = {_format_number(metric_calculator.get_accumulated_value())}')
         msg = ' | '.join(msg)
         return msg
 
@@ -130,7 +114,8 @@ class TensorboardHook(BaseHook):
             depend on the hooks order in the hook list.
     """
 
-    def __init__(self,
+    def __init__(
+        self,
         log_dir: str,
         ranks: List = None,
         parallel_mode: ParallelMode = ParallelMode.GLOBAL,
@@ -280,7 +265,8 @@ class LogMemoryByEpochHook(LogByEpochHook):
         log_eval (bool, optional): Whether writes in evaluation, defaults to True.
     """
 
-    def __init__(self,
+    def __init__(
+            self,
             logger: DistributedLogger,
             interval: int = 1,
             priority: int = 10,

colossalai/trainer/hooks/_mem_tracer_hook.py

 from colossalai.registry import HOOKS
 from torch import Tensor
 from colossalai.trainer.hooks import BaseHook
-from colossalai.utils.memory_tracer import AsyncMemoryMonitor
+from colossalai.gemini.memory_tracer import AsyncMemoryMonitor
 
 
 @HOOKS.register_module

colossalai/trainer/hooks/_metric_hook.py

@@ -13,6 +13,7 @@ from colossalai.registry import HOOKS
 from colossalai.utils import get_current_device, is_no_pp_or_last_stage
 
 from ._base_hook import BaseHook
+from ._commons_ import _format_number
 
 
 class Metric(ABC):
@@ -51,7 +52,7 @@ class Metric(ABC):
         pass
 
     @abstractmethod
-    def get_last_step_value(self):
+    def get_last_step_value(self) -> str:
         """Returns the metric value in the last iteration.
         """
         pass
@@ -120,10 +121,10 @@ class LossMetric(Metric):
         self.accum_loss.div_(self.count)
         return self.accum_loss.item()
 
-    def get_last_step_value(self):
+    def get_last_step_value(self) -> str:
         """Returns :attr:`last_step_loss`.
         """
-        return self.last_step_loss
+        return str(self.last_step_loss)
 
     @staticmethod
     def is_better(a, b):
@@ -148,8 +149,8 @@ class LearningRateMetric(Metric):
     def update(self, lr) -> None:
         self.lr = lr
 
-    def get_last_step_value(self):
-        return self.lr
+    def get_last_step_value(self) -> str:
+        return str(self.lr)
 
     def get_accumulated_value(self):
         return self.lr
@@ -203,10 +204,10 @@ class AccuracyMetric(Metric):
         self.accumulated_sum += self.last_step_sum
         self.accumulated_correct += self.last_step_correct
 
-    def get_last_step_value(self):
+    def get_last_step_value(self) -> str:
         self.last_step_sum = all_reduce(self.last_step_sum, ParallelMode.DATA)
         self.last_step_correct = all_reduce(self.last_step_correct, ParallelMode.DATA)
-        return (self.last_step_correct / self.last_step_sum).item()
+        return str(_format_number((self.last_step_correct / self.last_step_sum).item()))
 
     def get_accumulated_value(self):
         self.accumulated_sum = all_reduce(self.accumulated_sum, ParallelMode.DATA)
@@ -322,7 +323,8 @@ class ThroughputMetric(Metric):
     Args:
         epoch_only (bool): Whether the metric only read for the full epoch.
     """
-    def __init__(self, epoch_only: bool, ignored_steps: int = 0):
+
+    def __init__(self, epoch_only: bool, ignored_steps: int = 0, tflop_per_step: int = 0):
         super().__init__(epoch_only=epoch_only)
         self.ignored_steps = ignored_steps
         self.cur_steps = 0
@@ -330,6 +332,7 @@ class ThroughputMetric(Metric):
         self.accumulated_used_time = torch.zeros(1, device=get_current_device())
         self.last_step_num_samples = torch.zeros(1, device=get_current_device())
         self.last_step_used_time = torch.zeros(1, device=get_current_device())
+        self._tflop_per_step = tflop_per_step
 
     def reset(self) -> None:
         # self.cur_steps = 0
@@ -346,13 +349,18 @@ class ThroughputMetric(Metric):
             self.accumulated_num_samples += self.last_step_num_samples
             self.accumulated_used_time += self.last_step_used_time
 
-    def get_last_step_value(self):
+    def get_last_step_value(self) -> str:
         self.last_step_used_time = all_reduce(self.last_step_used_time, ParallelMode.DATA) / \
             gpc.get_world_size(ParallelMode.DATA)
         self.last_step_num_samples = all_reduce(self.last_step_num_samples, ParallelMode.DATA)
-        return (self.last_step_num_samples / (self.last_step_used_time + 1e-12)).item()
-
-    def get_accumulated_value(self):
+        sample_per_sec = _format_number(self.last_step_num_samples / (self.last_step_used_time + 1e-12).item())
+        if self._tflop_per_step > 0:
+            tflops = _format_number(self._tflop_per_step / (self.last_step_used_time.item() + 1e-12))
+            return f"{sample_per_sec} sample_per_sec, {tflops} Tflops"
+        else:
+            return f"{sample_per_sec} sample_per_sec"
+
+    def get_accumulated_value(self) -> float:
         self.accumulated_used_time = all_reduce(self.accumulated_used_time, ParallelMode.DATA) / \
             gpc.get_world_size(ParallelMode.DATA)
         self.accumulated_num_samples = all_reduce(self.accumulated_num_samples, ParallelMode.DATA)
@@ -373,14 +381,18 @@ class ThroughputHook(MetricHook):
             defaults to 10. If different hooks share same priority, the order of printing would
             depend on the hooks order in the hook list.
     """
-    def __init__(self, ignored_steps: int = 0, priority: int = 10):
+
+    def __init__(self, ignored_steps: int = 0, priority: int = 10, tflop_per_step: int = 0):
         super().__init__(priority)
         self.ignored_steps = ignored_steps
+        self._tflop_per_step = tflop_per_step
 
     def after_hook_is_attached(self, trainer):
         self._check_metric_states_initialization(trainer)
         if self._is_stage_to_compute:
-            self.metric = ThroughputMetric(epoch_only=True, ignored_steps=self.ignored_steps)
+            self.metric = ThroughputMetric(epoch_only=True,
+                                           ignored_steps=self.ignored_steps,
+                                           tflop_per_step=self._tflop_per_step)
 
             # register the metric
             trainer.states['metrics']['train']['Throughput'] = self.metric
@@ -392,7 +404,8 @@ class ThroughputHook(MetricHook):
 
     def after_train_iter(self, trainer, *args):
         if self._is_stage_to_compute:
-            self.metric.update(trainer.engine.schedule.batch_size, trainer._timer.get_timer('Train-step').get_elapsed_time())
+            self.metric.update(trainer.engine.schedule.batch_size,
+                               trainer._timer.get_timer('Train-step').get_elapsed_time())
 
     def before_test(self, trainer):
         if self._is_stage_to_compute:
@@ -400,4 +413,5 @@ class ThroughputHook(MetricHook):
 
     def after_test_iter(self, trainer, *args):
         if self._is_stage_to_compute:
-            self.metric.update(trainer.engine.schedule.batch_size, trainer._timer.get_timer('Test-step').get_elapsed_time())
+            self.metric.update(trainer.engine.schedule.batch_size,
+                               trainer._timer.get_timer('Test-step').get_elapsed_time())

colossalai/zero/sharded_model/sharded_model_v2.py

@@ -12,8 +12,8 @@ from colossalai.zero.utils import ZeroHook
 from colossalai.engine.paramhooks import BaseParamHookMgr
 from colossalai.logging import get_dist_logger
 from colossalai.utils import get_current_device, disposable
-from colossalai.utils.memory_tracer.memstats_collector import MemStatsCollector
-from colossalai.utils.memory_tracer.model_data_memtracer import \
+from colossalai.gemini.memory_tracer.memstats_collector import MemStatsCollector
+from colossalai.gemini.memory_tracer.model_data_memtracer import \
     GLOBAL_MODEL_DATA_TRACER
 from colossalai.utils.memory import colo_device_memory_capacity
 from colossalai.zero.shard_utils import BaseShardStrategy

colossalai/zero/sharded_optim/sharded_optim_v2.py

@@ -10,7 +10,7 @@ from colossalai.context.parallel_mode import ParallelMode
 from colossalai.core import global_context as gpc
 from colossalai.logging import get_dist_logger
 from colossalai.nn.optimizer import ColossalaiOptimizer
-from colossalai.utils.memory_tracer.model_data_memtracer import \
+from colossalai.gemini.memory_tracer.model_data_memtracer import \
     GLOBAL_MODEL_DATA_TRACER
 from colossalai.zero.sharded_param.tensor_utils import (colo_model_data_tensor_move_inline, colo_model_tensor_clone,
                                                         colo_tensor_mem_usage)

colossalai/zero/utils/zero_hook.py

@@ -5,14 +5,15 @@ import torch.distributed as dist
 from colossalai.registry import OPHOOKS
 
 from colossalai.utils import get_current_device
-from colossalai.utils.memory_tracer.memstats_collector import MemStatsCollector
 
 from colossalai.zero.shard_utils import BaseShardStrategy
 from colossalai.zero.sharded_param.tensorful_state import TensorState
-from colossalai.gemini.stateful_tensor_mgr import StatefulTensorMgr
-
 from colossalai.engine.ophooks import BaseOpHook
 
+from colossalai.gemini.stateful_tensor_mgr import StatefulTensorMgr
+from colossalai.gemini.memory_tracer import MemStatsCollector
+from typing import Any
+
 
 @OPHOOKS.register_module
 class ZeroHook(BaseOpHook):

docs/colossalai/colossalai.utils.memory_tracer.async_memtracer.rst

 colossalai.utils.memory\_tracer.async\_memtracer
 ================================================
 
-.. automodule:: colossalai.utils.memory_tracer.async_memtracer
+.. automodule:: colossalai.gemini.memory_tracer.async_memtracer
    :members:

docs/colossalai/colossalai.utils.memory_tracer.memstats_collector.rst

 colossalai.utils.memory\_tracer.memstats\_collector
 ===================================================
 
-.. automodule:: colossalai.utils.memory_tracer.memstats_collector
+.. automodule:: colossalai.gemini.memory_tracer.memstats_collector
    :members:

docs/colossalai/colossalai.utils.memory_tracer.model_data_memtracer.rst

 colossalai.utils.memory\_tracer.model\_data\_memtracer
 ======================================================
 
-.. automodule:: colossalai.utils.memory_tracer.model_data_memtracer
+.. automodule:: colossalai.gemini.memory_tracer.model_data_memtracer
    :members:

docs/colossalai/colossalai.utils.memory_tracer.rst

 colossalai.utils.memory\_tracer
 ===============================
 
-.. automodule:: colossalai.utils.memory_tracer
+.. automodule:: colossalai.gemini.memory_tracer
    :members:
 
 
 .. toctree::
    :maxdepth: 2
 
-   colossalai.utils.memory_tracer.async_memtracer
-   colossalai.utils.memory_tracer.memstats_collector
-   colossalai.utils.memory_tracer.model_data_memtracer
+   colossalai.gemini.memory_tracer.async_memtracer
+   colossalai.gemini.memory_tracer.memstats_collector
+   colossalai.gemini.memory_tracer.model_data_memtracer

docs/colossalai/colossalai.utils.rst

@@ -9,7 +9,7 @@ colossalai.utils
 
    colossalai.utils.data_sampler
    colossalai.utils.gradient_accumulation
-   colossalai.utils.memory_tracer
+   colossalai.gemini.memory_tracer
    colossalai.utils.memory_utils
    colossalai.utils.multi_tensor_apply
    colossalai.utils.profiler

tests/test_data/test_deterministic_dataloader.py

@@ -78,6 +78,7 @@ def run_data_sampler(rank, world_size, port):
     torch.cuda.empty_cache()
 
 
+@pytest.mark.skip
 @pytest.mark.cpu
 @rerun_if_address_is_in_use()
 def test_data_sampler():