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* add aux_ctx_tensors to save_for_backward
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* tweak make_decoder_mask and make_mask in jax tests
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* skip dBias for shapes other than 1HSS; otherwise dq/dk/dv NaNs
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* expand attn_biases from list to variables in save_for_backward
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix use of variable before assignment in jax dact_lu
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* remove window size definition for decoder
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* add change notes in README for padding mask in PyTorch
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* tweak padding mask notes in README
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* expand list to tensors for save_for_backwards
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

---------
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>
Signed-off-by: cyanguwa <8636796+cyanguwa@users.noreply.github.com>

* added squared relu in te-torch
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* FP8 cuda graphs
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Co-authored-by: Vasudevan Rengasamy <vrengasamy@nvidia.com>
Co-authored-by: Charlene Yang <charleney@nvidia.com>

* Fix numerics
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* exclude torch compile from numerics tests
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* More numerics fixes
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Fix tests
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Fix CI
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* rm fusion from unfused path
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

---------
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Co-authored-by: Vasudevan Rengasamy <vrengasamy@nvidia.com>
Co-authored-by: Charlene Yang <charleney@nvidia.com>

* Enable DGRAD RS overlap
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>

* fix lint; apply suggestions
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

---------
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Co-authored-by: Vasudevan Rengasamy <vrengasamy@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* TP-RS overlap with send/recv

Atomic GEMM based TP-RS overlap with send/recv
Signed-off-by: Sangkug Lym <slym@nvidia.com>

Specify userbuffer overlap method of each overlap instance
Signed-off-by: Sangkug Lym <slym@nvidia.com>

P2P TP-RS overlap with fp8 GEMM outputs
Signed-off-by: Sangkug Lym <slym@nvidia.com>

Fix TP-RS overlap with send/recv
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* cleanup
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* cleanup
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* linting
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* fix typo
Signed-off-by: Sangkug Lym <slym@nvidia.com>

---------
Signed-off-by: Sangkug Lym <slym@nvidia.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>

* Added QuickGELUActivation from HuggingFace/Transformers to common and pytorch
Signed-off-by: Alp Dener <adener@nvidia.com>

* Removing 'qgelu' from double-size activations list in LayerNormMLP.
Signed-off-by: Alp Dener <adener@nvidia.com>

* indent fix
Signed-off-by: Alp Dener <adener@nvidia.com>

---------
Signed-off-by: Alp Dener <adener@nvidia.com>
Co-authored-by: Przemyslaw Tredak <ptredak@nvidia.com>

* Pass knobs for TP comm overlap instead of env vars
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>

* Comment out debugging print
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>

* Remove docstring
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>

* Remove debugging output
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>

---------
Signed-off-by: Jaemin Choi <jaeminc@nvidia.com>
Co-authored-by: Jaemin Choi <jaeminc@nvidia.com>

* test alibi between fa and fu
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* move alibi slopes and bias to global to avoid repeating calculation
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix alibi slopes/bias generation
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix _is_flash_attention_supported to allow alibi type
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* disable padding mask when alibi is used for fused attn arbi backend
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* add support for custom [n_heads] alibi_slopes in flash, fused, unfused attention
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* clean up last commit
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* remove alibi_type=none tests as they are unnecessary
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* update cudnn-frontend to 1.0.2
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* change bias/dbias shape to allow b,1/1,h/b,h in arbi backend
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* tweak tests for arbi post_scale_bias [1,h,s,s] or alibi_slopes [n_heads]
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* change bias/dbias shape in max512 backend - incomplete
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* remove max512 changes from last commit and disable max512 (and arbi temporarily) for [b, h, s, s]; pending cuDNN backend support
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* clean up and tweak backend selection logic
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* replace || with () in docstring
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix bias shape for max512 backend
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* combine slopes/bias generation to one function get_alibi() and fix alibi tests
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix lint
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix PR557 bugs
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* Update transformer_engine/pytorch/attention.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: cyanguwa <8636796+cyanguwa@users.noreply.github.com>

* encapsulate global alibi tensors into a dict cache
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* reduce alibi slopes test size
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* update to cudnn-frontend 1.0.3
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* use dBias shape to define bias_b/bias_h because jax materializes dBias rather than Bias in bwd abstract
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

---------
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>
Signed-off-by: cyanguwa <8636796+cyanguwa@users.noreply.github.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>

* make TransformerLayer accept a `bshd` or `sbhd` tensor format
Signed-off-by: Sudhakar Singh <sudhakars@nvidia.com>

* Fixes from feedback
Signed-off-by: Sudhakar Singh <sudhakars@nvidia.com>

* more feedback fixes
Signed-off-by: Sudhakar Singh <sudhakars@nvidia.com>

* remove incorrect info from docstring
Signed-off-by: Sudhakar Singh <sudhakars@nvidia.com>

* fix from feedback
Signed-off-by: Sudhakar Singh <sudhakars@nvidia.com>

---------
Signed-off-by: Sudhakar Singh <sudhakars@nvidia.com>

Signed-off-by: Przemek Tredak <ptredak@nvidia.com>

* add sliding window to FA
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix forward logic
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix lint
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* change bert test to causal as unfused does not support padding
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix FlashAttention for v2-2.3 versions
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* verify FA swa works
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix mask related restrictions and duplicate code after merge
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix swa test
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* add docstring for get_swa func
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* move repeated code into a function
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* revert mask change
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* add determinism filter and fix FA warning message
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* add message for determinism filter
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* simplify check_set_window_size()
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix check_set_window_size in transformer layers
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

* fix indent
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>

---------
Signed-off-by: Charlene Yang <8636796+cyanguwa@users.noreply.github.com>
Signed-off-by: cyanguwa <8636796+cyanguwa@users.noreply.github.com>