GitLab

* Refactor Setuptools build system

Successfully launches CMake install, but installs CMake extensions in temp dir.
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Debug JAX build

Fix pybind11 import. Distinguish between build-time and run-time dependencies.
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Add helper function to determine dependencies
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Add missing license
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Debug case where system CMake is too old
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Add missing license
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Simplify sanity import tests

Just importing modules provides richer error messages.
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Properly install submodules
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Install helper library for TensorFlow
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Update documentation
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Do not install Ninja by default
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Include Git commit hash in version string
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Override build_ext.build_extensions instead of build_ext.run
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Fix incorrect include path

Restore Ninja dependency. Restore overriding build_ext.run func.
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Review suggestions from @nouiz
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Disable parallel Ninja jobs in GitHub actions
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Properly install userbuffers lib
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Tweak install docs

Review suggestion from @ksivaman
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Add examples for specifying framework in docs
Signed-off-by: Tim Moon <tmoon@nvidia.com>

---------
Signed-off-by: Tim Moon <tmoon@nvidia.com>

* Unfused scale+softmax if bias is present
Signed-off-by: Reese Wang <rewang@nvidia.com>

* WAR a causal masking + no_bias bug and add the unittests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix the optional args (bias) sharding
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Disable fused attn in JAX by default, enable it with NVTE_USE_FUSED_ATTN
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add thread local for the plan cache
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Rename dbeta to dbias for the readability
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add scaled softmax with dropout test cases
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Updated NVTE_FUSED_ATTN variable name
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

Signed-off-by: Frederic Bastien <fbastien@nvidia.com>

* Adding JAX/Praxis modules and dependencies.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding UTs to JAX/Praxis modules.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Remove praxis as a dependency due to not strictly needed
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Repalce is_fp8_supported to is_fp8_available
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Make Praxis as an optional dependency.

1. Removed 'from . import praxis' in __init__.py.
    1.1 Noted, keep 'from . import flax' for deprecated warning.
2. Changed te.flax to te_flax in examples and README.rst.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding a workaround to FP8 training on Praxis.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

bugfix for softmax lowering
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

[JAX] Fix missing axes parameters in TransformerLayer and the wrong shape of bias in LayerNormMLP (#196)

Fixed missing axes and wrong shape of bias in LayerNormMLP
Signed-off-by: Ming Huang <mingh@nvidia.com>

* add mp example
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update doc-string
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* better FP8 checker
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* replace te.* with te.flax* to remove deprecated warning
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove nouse os.environ
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove nouse
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix typo
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update examples/jax/encoder/README.md
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update examples/jax/encoder/README.md
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update examples/jax/encoder/README.md
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update examples/jax/encoder/README.md
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update examples/jax/encoder/test_multiprocessing_encoder.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove cuda-python
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* adjust readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update examples/jax/encoder/README.md
Signed-off-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix cpp lint

fix issue of "Could not find a newline character at the end of the file."
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix AssertionError: 1 GPU per process
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* replace tfds with datasets

The Flax application crash if it use TensorFlow Dataset (tfds) in NVIDIA JAX container.
The tfds is very useful for downloading well-knwon dataset (e.g., MNIST, GLUE) and commonly used by TF/JAX community.
However, it seems like that it is NOT compatible with NVIDIA TensorFlow in NVIDIA JAX container and somehow affects JAX.
It triggers random errors at JAX initialization depending on different versions, and make CI unstable.
Thus, this commit replaces tfds with "huggingface datasets" to download needed datasets.
See "nvbugs 4039266" for more details.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix input sharding

Unlike SPMD mode, in multiprocessing mode, the input tensor must be sharded manually.
Using DP=4, TP=2 as an example, the device mesh looks like:

mesh.device_ids = [[0, 1],
                   [2, 3],
                   [4, 5],
                   [6, 7]]

Assume that the process ID is mapped to GPU ID.
The process 0 and process 1 are grouped for model parallelism,
process 2 and process 3 are grouped together too, and so on.

The process 0 and process 1 need to share the same micro-batch in the training step,
process 0 and process 2, 4, and 6 have different micro-batch.

Thus, `shard_array_wrapper` partitions inputs to 4 parts (and setup
needed arguments for jax.make_array_from_single_device_arrays).
The process 0 and process 1 take the first quarter,
process 2 and process 3 take the second quarter, and so on.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor UT for multiprocess example

Use Python `multiprocessing` to test the multiprocessing example,
if the system has multiple GPU. 1 GPU per process.

Because `jax.distributed.initialize` must be called before any other JAX or Flax API,
GPU info cannot be queried by calling jax.local_devices() in TestEncoder.
Thus, `unittest_query_gpu()` forks another process to query number of GPUs and
FP8 capability.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove nouse arg `--num-gpu`

JAX doesn't have an API to setup number of GPU used in SPMD mode.
The only way is to use `CUDA_VISIBLE_DEVICES` for now.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix typo
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix ut
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* simplify the mask setting
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* increase batch-size for multigpu example

The batch-size 64 is too small to be partitioned for 8xH100.
If batch-size is 64, the GEMM shape is 256x8192x8 per GPU.
The 8 is too small for FP8 GEMM kernel, and
cuBLASLt will throw "Failed to query heuristics".
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix downloading mnist error

To download MNIST via `huggingface datasets`, it requires Pillow.
Otherwise, it throws `An error occurred while generating the
dataset`
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

---------
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Signed-off-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>

* Add fused attention unit tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Use NVTE_* enums
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Use NVTE_Mask_Type and remove FMHADescriptor
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Move common functions to utils
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Change namespace to fused_attn
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Move fused_attn_max_512_fwd_qkvpacked under the general APIs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add fused_attn_max_512_bwd_qkvpacked
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Move fused_attn_max_512_bwd_qkvpacked under the general APIs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove redundant blank line
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix a potential bug for cu_seqlen converter
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Reformat fused_attn_max_512
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refine the unfused attention warning message
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Rename to fused_attn_max_512
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove the deprecated header
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix flax import
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Rename to fused attn
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add attention related mask
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add attn_mask_type and attn_bias_type
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refactor jax primitive API
* Merge q_cu_seqlen and kv_cu_seqlen
* Remove is_causal_masking
* Replace seed with rng_state
* Add is_training argument
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove dsoftmax from the customcall
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add None guard for bias and dropout_rng
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add version guard
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add is_fused_attn_kernel_available() to correctly dispatch the attention impl
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix the merge conflict
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Adjust the code style
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add the missing blank lines
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Change the order of FADescriptor members
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Enhance the readability of fused_attn_max_512.cu
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Generalize the input dimension unpacking
Signed-off-by: Reese Wang <rewang@nvidia.com>

* 16 bits fused attention requires 8.9.1
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Update fused attention support matrix
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Handle None type when sharding
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Change to the padding ratio
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Performance optimization for non-bias cases
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Revert the cudnn-frontend PRIVATE keyword which was used for debugging
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Revert "Update fused attention support matrix"

This reverts commit 4effe67d0f08f733919a329ce5ab421958740f4a.
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Treat b * s as total_seqs to align ragged cases
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add FP16/BF16 max_seqlen <= 512 fused attention to the support matrix
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refine test_fused_attn.py

* Replace reference code with flax.linen
* Remove unnecessary comments
* Use AttnMaskType
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Unify the cuDNN compile version
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add dropout to the support matrix
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Slightly adjust the headers
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Typo fix: remove redundant either
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Consolidating fused attention requirements
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Replace cudnn_frontend::throw_if with NVTE_CHECK for the better error line report
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Rename to fused_attn_fp16_bf16_max_seqlen_512 for the better readability
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove CUDNN_FRONTEND_UNUSED
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add more annotations to the custom calls
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Adjust Module Structure.

1. Collect Flax related modules to a sub-folder, flax.
2. Add a function to unify scale_init for zero-centered-gamma LN.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Make changes be compatible to previous versions.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adapt jax/examples to the new module structure.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Update jax/docs and Add deprecated warning.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Update README
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding deprecated_wrapper
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding deprecated warning to flax modules which imported via transformer_engine.jax
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix CI errors and update docs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Removing unnecessary deprecated warning in docs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Implementing __iter__ to DeprecatedEnum.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Allow update_collections and update_fp8_metas to return both Dict and FrozenDict.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix the wrong shape issue of bias when fused QKV or KV.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Reuse tuplized features for bias creating.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Replace get_args to be more readable.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Port initial changes
Co-authored-by: Sangkug Lym <slym@nvidia.com>
Co-authored-by: Vasudevan Rengasamy <vrengasamy@nvidia.com>
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* readd FA include for PyTorch
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Re-enable sm_70 + cleanup
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* LICENSE, cleanup header
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* 5k -> 173 errors
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* license and fixes in userbuffers-host
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* next round fixes
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* final cpp cleanup
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* pylinting
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix from linting
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Turn off default async amax reduction (#148)
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* remove unused code path
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* cleanup Macros
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* fix conflict resolution bug
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* Fix gencode flags in setup (#145)

* Fix gencode flags based on cuda version
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* review suggestions
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* revert append_nvcc_threads change
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

---------
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Change overlap config dict error message
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* simplify ub initialization
Signed-off-by: Sangkug Lym <slym@nvidia.com>

* lint
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix sanity imports
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* cpplint
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix TensorFlow build
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix TE macros in public header
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix lint
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* More fixes
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* compiles with and w/o MPI
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fixes for python side annotations for conditional compile
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* link gdrAPI only when MPI found
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix comments for dummy var
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Fix linking
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Review comments
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* load MPI before TE
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Add Py side argument checks
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* remove unused code and catch silent failures
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Fix cpp tests
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* fix find_lib path for tests
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

---------
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Signed-off-by: Sangkug Lym <slym@nvidia.com>
Co-authored-by: Sangkug Lym <slym@nvidia.com>
Co-authored-by: Vasudevan Rengasamy <vrengasamy@nvidia.com>

* Add zero_center_gamma/functional pass
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add zero_centered_gamma for fp8_ln_mlp
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add zero_centered_gamma to modules
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add zero_centered_gamma to TransformerLayer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refactored code style for improved readability and consistency
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Docs enhancement for zero_centered_gamma
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add escape for line break and remove some bad if conditions
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Revise scale_init docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>

* Rename enable_fp8 to is_fp8_enabled.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding an API to get an instance of  DelayedScaling which is set via fp8_autocast.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Support transpose_bs when decoded=True
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix Bugs,

1. Fix missing dropout_dims in LayerNormMLP.
2. Fix broadcast issues in decoded.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix wrong masks in decoded.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fixed wrong assert condition in TransformerLayer
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix amax is not set as 0 in each step.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Enhance rules conflict checking and docs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* fix code formatting.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* refactor JAX examples
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix doc-string
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add dp example
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix params_axes_pspec
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Add model parallel example and refactor
Update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* align code and readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update verification
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add mask
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* num_gpu is configurable
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* solvepylint issue
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* ignore markdown and txt file from license check
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update README.md
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add flax into requirements.txt
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

---------
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Adding JAX to README.rst
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Refine README.rst as the suggestion from review.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Refine the API doc of extend_logical_axis_rules.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Updated TE/JAX docs
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding TE/JAX docs' rst files
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Set DType as pybind11::module_local() to avoid generic_type errors.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Updating license and exporting more modules
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adopting autoapi and removing enum_tools.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix typo
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Make jax.rst be style consistent.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fixing doc statements as the suggestion from review.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fixing doc statements as the suggestion from code review.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Update the description of Softmax
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Removed categories in catalog as PyTorch
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* add transformer module , unittests and examples
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update tests/jax/test_sharding.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update transformer_engine/jax/transformer.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* remove pylint: disable=line-too-long
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove pylint: disable=too-many-func-args
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Fix the wrong broadcasting dim to dropout masks when enable transpose_bs.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Enable 2xACC for WGRAD and DGRAD by default
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* rename LayerNormMlpBlock as LayerNormMLP
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor to avoid line-too-long
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* rename amax_history_size to amax_history_len
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* align dropout mask to TE/PyTorch as default
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* enlarge atol for decoder unittests

Two decoder unittests can pass in old JAX container(e.g., 23.02)
but can't in latest container (devel).

1. The actual(-0.020264) and desired(-0.020386) are very close.
2. The TE kernels are not changed, the diff should come from
   new codegen behavior of XLA.

Thus, it is a common floating-point accumulated error.
Enlarge atol to avoid unittest failures.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Adding Amax History Support

1. hide amax update in custom_vjp
2. replace amax indexing with roll(using circular buffer)
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* move kernel_init to __post_init__
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor encoder examples
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update transformer_engine/jax/fp8.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update transformer_engine/jax/fp8.py
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* remove envvar regarding 2xACC
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove unused import
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

---------
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Co-authored-by: Ming-Xu Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* add building workflow for jax modules
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* replace bit_cast with reinterpret_cast
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add nvtx to cmake check list
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor layernorm fwd
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor rmsnorm fwd
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor layernorm_bwd
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* set pytorch as default in setup.py
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* rename extension from *.cc to *.cpp

cpplint cannot recognize *.cc file, so rename the extension
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor style, to align TE/PyTorch
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add pybinding, unittest and qa
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix license
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* disable c-extension-no-member and no-name-in-module
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add dataclass avoid pylint error
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update transformer_engine/__init__.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update tests/jax/test_custom_call_shape.py

fix typo
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update tests/jax/test_custom_call_shape.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* add building workflow for jax modules
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* replace bit_cast with reinterpret_cast
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add nvtx to cmake check list
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor layernorm fwd
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor rmsnorm fwd
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor layernorm_bwd
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* set pytorch as default in setup.py
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* rename extension from *.cc to *.cpp

cpplint cannot recognize *.cc file, so rename the extension
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor style, to align TE/PyTorch
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add pybinding, unittest and qa
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix license
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* disable c-extension-no-member and no-name-in-module
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add dataclass avoid pylint error
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update transformer_engine/__init__.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update tests/jax/test_custom_call_shape.py

fix typo
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update tests/jax/test_custom_call_shape.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* fix conflict due to PR62
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix c-extension-no-member and no-name-in-module

1. add transformer_engine_jax into extension-pkg-whitelist
2. convert pylintrc from CRLF to LF format
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update setup.py
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* remove pylint:disable and refactor import order
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

---------
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>